Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G01130 Aquilegia oxysepala HOM05D004481 ORTHO05D005350 3.2e-170 601.7 301 100.0
PSO210G1902 Papaver somniferum HOM05D004481 ORTHO05D005350 1.3e-131 473.4 291 78.7
PSO170G4403 Papaver somniferum HOM05D004481 ORTHO05D005350 2.3e-128 462.6 286 78.3
TAR628G0287 Trochodendron aralioides HOM05D004481 ORTHO05D005350 2.0e-124 449.5 286 78.0
TAR376G0836 Trochodendron aralioides HOM05D004481 ORTHO05D005350 2.9e-123 445.7 284 77.1
GSVIVG01037896001 Vitis vinifera HOM05D004481 ORTHO05D005350 1.9e-122 443.0 286 75.5
Lj5A215G63 Lonicera japonica HOM05D004481 ORTHO05D005350 9.3e-122 440.7 318 70.4
CiPaw.06G168400 Carya illinoinensis HOM05D004481 ORTHO05D005350 3.9e-120 435.3 284 76.8
Atru.chr5.2445 Acer truncatum HOM05D004481 ORTHO05D005350 6.7e-120 434.5 277 75.5
Nn1g04655 Nelumbo nucifera HOM05D004481 ORTHO05D005350 6.7e-120 434.5 282 75.2
Hma1.2p1_1023F.1_g248990 Hydrangea macrophylla HOM05D004481 ORTHO05D005350 2.8e-118 429.1 286 74.8
Prupe.8G137600 Prunus persica HOM05D004481 ORTHO05D005350 4.8e-118 428.3 284 73.6
FAN24G0473 Fragaria x ananassa HOM05D004481 ORTHO05D005350 8.2e-118 427.6 284 72.2
RcHm_v2.0_Chr6g0254491 Rosa chinensis HOM05D004481 ORTHO05D005350 1.1e-117 427.2 284 72.9
FvH4_2g04780 Fragaria vesca HOM05D004481 ORTHO05D005350 1.8e-117 426.4 285 72.3
Sabra09G0071800 Salix brachista HOM05D004481 ORTHO05D005350 1.8e-117 426.4 284 74.6
Thecc.02G111500 Theobroma cacao HOM05D004481 ORTHO05D005350 2.4e-117 426.0 286 72.0
Sp7g32060 Schrenkiella parvula HOM05D004481 ORTHO05D005350 9.0e-117 424.1 288 73.6
HanXRQChr04g0105981 Helianthus annuus HOM05D004481 ORTHO05D005350 2.0e-116 422.9 284 72.9
CANSAT25G3441 Cannabis sativa HOM05D004481 ORTHO05D005350 2.6e-116 422.5 286 71.7
Nitab4.5_0001480g0100 Nicotiana tabacum HOM05D004481 ORTHO05D005350 2.6e-116 422.5 284 72.5
Potri.001G298500 Populus trichocarpa HOM05D004481 ORTHO05D005350 4.5e-116 421.8 286 72.0
Cc02_g19430 Coffea canephora HOM05D004481 ORTHO05D005350 7.6e-116 421.0 284 73.6
CSS0002878 Camellia sinensis var. sinensis HOM05D004481 ORTHO05D005350 1.7e-115 419.9 286 72.4
CSS0015264 Camellia sinensis var. sinensis HOM05D004481 ORTHO05D005350 1.7e-115 419.9 286 72.4
Potri.009G093200 Populus trichocarpa HOM05D004481 ORTHO05D005350 1.7e-115 419.9 284 72.5
TWI79G1728 Tripterygium wilfordii HOM05D004481 ORTHO05D005350 1.7e-115 419.9 285 72.3
FAN27G3202 Fragaria x ananassa HOM05D004481 ORTHO05D005350 2.2e-115 419.5 281 71.5
Nn5g30459 Nelumbo nucifera HOM05D004481 ORTHO05D005350 2.9e-115 419.1 282 71.6
Nitab4.5_0003699g0050 Nicotiana tabacum HOM05D004481 ORTHO05D005350 3.8e-115 418.7 295 70.2
Cpa.g.sc106.118 Carica papaya HOM05D004481 ORTHO05D005350 8.5e-115 417.5 284 71.8
Ciclev10028970m.g Citrus clementina HOM05D004481 ORTHO05D005350 8.5e-115 417.5 286 71.3
Gohir.A12G021100 Gossypium hirsutum HOM05D004481 ORTHO05D005350 8.5e-115 417.5 289 71.3
CANSAT25G2190 Cannabis sativa HOM05D004481 ORTHO05D005350 1.1e-114 417.2 286 70.6
THA.LOC104819549 Tarenaya hassleriana HOM05D004481 ORTHO05D005350 1.1e-114 417.2 286 72.4
CAN.G606.21 Capsicum annuum HOM05D004481 ORTHO05D005350 1.4e-114 416.8 286 71.0
Sed0018810 Sechium edule HOM05D004481 ORTHO05D005350 1.9e-114 416.4 288 71.9
TWI75G0922 Tripterygium wilfordii HOM05D004481 ORTHO05D005350 1.9e-114 416.4 278 73.4
PGSC0003DMG400025761 Solanum tuberosum HOM05D004481 ORTHO05D005350 2.5e-114 416.0 284 72.2
THA.LOC104807234 Tarenaya hassleriana HOM05D004481 ORTHO05D005350 3.2e-114 415.6 287 73.5
MD10G1100100 Malus domestica HOM05D004481 ORTHO05D005350 4.2e-114 415.2 284 71.8
Gohir.D12G021400 Gossypium hirsutum HOM05D004481 ORTHO05D005350 7.2e-114 414.5 289 70.6
Gorai.008G021700 Gossypium raimondii HOM05D004481 ORTHO05D005350 7.2e-114 414.5 289 70.6
Duzib052G1089 Durio zibethinus HOM05D004481 ORTHO05D005350 2.1e-113 412.9 286 70.6
Peaxi162Scf00016g02527 Petunia axillaris HOM05D004481 ORTHO05D005350 2.1e-113 412.9 322 65.5
Actinidia27975 Actinidia chinensis HOM05D004481 ORTHO05D005350 2.7e-113 412.5 286 71.0
CARHR242510 Cardamine hirsuta HOM05D004481 ORTHO05D005350 3.6e-113 412.1 288 71.9
PGR142G4205 Punica granatum HOM05D004481 ORTHO05D005350 6.1e-113 411.4 280 70.0
ECA234G2632 Erigeron canadensis HOM05D004481 ORTHO05D005350 1.0e-112 410.6 301 69.1
Eucgr.I01088 Eucalyptus grandis HOM05D004481 ORTHO05D005350 1.0e-112 410.6 298 67.4
CSS0013759 Camellia sinensis var. sinensis HOM05D004481 ORTHO05D005350 1.4e-112 410.2 286 72.0
Sc18g0005550 Simmondsia chinensis HOM05D004481 ORTHO05D005350 1.8e-112 409.8 284 72.5
Thhalv10025895m.g Eutrema salsugineum HOM05D004481 ORTHO05D005350 3.9e-112 408.7 289 71.6
BcaNung04989 Brassica carinata HOM05D004481 ORTHO05D005350 5.1e-112 408.3 288 71.2
Rhsim11G0156300 Rhododendron simsii HOM05D004481 ORTHO05D005350 5.1e-112 408.3 284 69.7
AL7G17000 Arabidopsis lyrata HOM05D004481 ORTHO05D005350 6.7e-112 407.9 283 71.4
Carub.0007s0609 Capsella rubella HOM05D004481 ORTHO05D005350 2.5e-111 406.0 288 70.5
A01p04140 Brassica napus HOM05D004481 ORTHO05D005350 5.7e-111 404.8 286 71.0
Manes.07G066500 Manihot esculenta HOM05D004481 ORTHO05D005350 7.4e-111 404.4 283 72.4
C01p04510 Brassica napus HOM05D004481 ORTHO05D005350 9.7e-111 404.1 286 71.0
BolC1t00437H Brassica oleracea HOM05D004481 ORTHO05D005350 2.2e-110 402.9 286 70.6
AT4G34270 Arabidopsis thaliana HOM05D004481 ORTHO05D005350 2.8e-110 402.5 281 70.8
MSTRG.20195 Avicennia marina HOM05D004481 ORTHO05D005350 8.2e-110 401.0 286 69.2
CsaV3_7G008050 Cucumis sativus L. HOM05D004481 ORTHO05D005350 8.2e-110 401.0 284 70.1
Solyc10g049850.3 Solanum lycopersicum HOM05D004481 ORTHO05D005350 8.2e-110 401.0 284 70.4
Nitab4.5_0002647g0020 Nicotiana tabacum HOM05D004481 ORTHO05D005350 1.1e-109 400.6 284 70.4
Aa31LG2G16850 Aethionema arabicum HOM05D004481 ORTHO05D005350 1.4e-109 400.2 286 70.6
Dinv42206 Davidia involucrata HOM05D002228 ORTHO05D005350 1.4e-109 400.2 242 77.7
Migut.B00402 Erythranthe guttata HOM05D004481 ORTHO05D005350 1.8e-109 399.8 284 69.7
ClCG02G006560 Citrullus lanatus HOM05D004481 ORTHO05D005350 4.1e-109 398.7 294 68.4
SGA_v2.0_scaffold225G42995 Striga asiatica HOM05D004481 ORTHO05D005350 4.1e-109 398.7 284 71.1
AUR62010332 Chenopodium quinoa HOM05D004481 ORTHO05D005350 5.3e-109 398.3 284 68.3
BraA01t00403Z Brassica rapa HOM05D004481 ORTHO05D005350 1.2e-108 397.1 302 67.9
MELO3C018500.2 Cucumis melo HOM05D004481 ORTHO05D005350 4.5e-108 395.2 284 69.7
CSS0003948 Camellia sinensis var. sinensis HOM05D004481 ORTHO05D005350 1.0e-107 394.0 274 70.4
Psat6g216600 Pisum sativum HOM05D004481 ORTHO05D005350 1.4e-106 390.2 285 68.4
Oeu037260.1 Olea europaea HOM05D004481 ORTHO05D005350 1.9e-106 389.8 286 68.2
Glyma.20G130700 Glycine max HOM05D004481 ORTHO05D005350 2.5e-106 389.4 287 66.9
Lj5g0012751 Lotus japonicus HOM05D004481 ORTHO05D005350 3.2e-106 389.0 282 68.8
Phvul.007G041700 Phaseolus vulgaris HOM05D004481 ORTHO05D005350 7.2e-106 387.9 281 67.3
Sed0023236 Sechium edule HOM05D004481 ORTHO05D005350 7.2e-106 387.9 293 66.9
TPR.G27083 Trifolium pratense HOM05D004481 ORTHO05D005350 7.2e-106 387.9 287 67.6
SalBow6G4388 Salvia bowleyana HOM05D004481 ORTHO05D005350 1.6e-105 386.7 322 63.7
SalBow6G4779 Salvia bowleyana HOM05D004481 ORTHO05D005350 1.6e-105 386.7 322 63.7
Hund06305 Selenicereus undatus HOM05D004481 ORTHO05D005350 2.1e-105 386.3 288 69.8
CDE02G3699 Ceratophyllum demersum HOM05D004481 ORTHO05D005350 2.7e-105 386.0 301 65.4
VMungo0720G1503 Vigna mungo HOM05D004481 ORTHO05D005350 4.7e-105 385.2 282 67.4
arahy.Tifrunner.gnm1.ann1.5RC8JY Arachis hypogaea HOM05D004481 ORTHO05D005350 1.0e-104 384.0 285 67.4
Glyma.10G260500 Glycine max HOM05D004481 ORTHO05D005350 2.3e-104 382.9 288 66.7
Medtr1g107045 Medicago truncatula HOM05D004481 ORTHO05D005350 2.3e-104 382.9 287 66.2
Cfa004607 Carpinus fangiana HOM05D004481 ORTHO05D005350 1.5e-103 380.2 252 75.0
Ca_11058_v3 Cicer arietinum L. HOM05D004481 ORTHO05D005350 7.4e-103 377.9 287 65.9
Lalb_Chr02g0145211 Lupinus albus HOM05D004481 ORTHO05D005350 3.7e-102 375.6 288 65.6
DCAR_021976 Daucus carota HOM05D004481 ORTHO05D005350 6.3e-102 374.8 254 73.2
Lalb_Chr21g0308241 Lupinus albus HOM05D004481 ORTHO05D005350 1.2e-100 370.5 286 67.1
EL10Ac9g22252 Beta vulgaris HOM05D004481 ORTHO05D005350 2.6e-100 369.4 285 66.3
vmacro01990 Vaccinium macrocarpon HOM05D004481 ORTHO05D005350 7.7e-100 367.9 289 64.7
Lsat_1_v5_gn_5_116421 Lactuca sativa HOM05D004481 ORTHO05D005350 2.9e-99 365.9 253 71.9
QL11p032653 Quercus lobata HOM05D004481 ORTHO05D005350 3.8e-99 365.5 252 73.4
unitig_0.g879 Utricularia gibba HOM05D004481 ORTHO05D005350 1.4e-98 363.6 284 65.8
Os03g0760600 Oryza sativa ssp. japonica HOM05D004481 ORTHO05D005350 3.2e-98 362.5 292 64.0
Zm00001eb214380 Zea mays HOM05D004481 ORTHO05D005350 2.7e-97 359.4 299 62.2
FAN15G0583 Fragaria x ananassa HOM05D004481 ORTHO05D005350 4.7e-97 358.6 284 63.7
Rhsim11G0157800 Rhododendron simsii HOM05D004481 ORTHO05D005350 8.0e-97 357.8 284 64.4
Haze_10202 Corylus avellana HOM05D004481 ORTHO05D005350 6.7e-96 354.8 287 65.2
PGSC0003DMG400023263 Solanum tuberosum HOM05D004481 ORTHO05D005350 8.8e-96 354.4 257 69.3
SEGI_10030 Sequoiadendron giganteum HOM05D004481 ORTHO05D005350 5.7e-95 351.7 283 62.5
CiPaw.05G013400 Carya illinoinensis HOM05D004481 ORTHO05D005350 1.1e-93 347.4 227 74.0
ATR0661G316 Amborella trichopoda HOM05D004481 ORTHO05D005350 7.0e-93 344.7 242 70.7
arahy.Tifrunner.gnm1.ann1.PGW4NS Arachis hypogaea HOM05D004481 ORTHO05D005350 2.0e-92 343.2 253 68.0
Hma1.2p1_1023F.1_g249000 Hydrangea macrophylla HOM05D004481 ORTHO05D005350 4.5e-92 342.0 208 79.3
SHI05271 Sapria himalayana HOM05D004481 ORTHO05D005350 2.0e-87 326.6 258 63.6
Ah.01g010900 Amaranthus hybridus HOM05D004481 ORTHO05D005350 1.1e-85 320.9 285 59.3
FAN20G2321 Fragaria x ananassa HOM05D004481 ORTHO05D005350 1.6e-84 317.0 283 57.6
Mapoly0064s0080 Marchantia polymorpha HOM05D004481 ORTHO05D005350 2.2e-83 313.2 312 54.8
Pp3c10_18670 Physcomitrium patens HOM05D004481 ORTHO05D005350 5.5e-82 308.5 288 53.8
SMO361G0327 Selaginella moellendorffii HOM05D004481 ORTHO05D005350 3.4e-79 299.3 282 54.3
AagrBONN_evm.TU.Sc2ySwM_228.2403 Anthoceros agrestis HOM05D004481 ORTHO05D005350 5.4e-77 292.0 253 58.1
AUR62039053 Chenopodium quinoa HOM05D004481 ORTHO05D005350 6.6e-75 285.0 246 57.7
Actinidia00401 Actinidia chinensis HOM05D004481 ORTHO05D005350 3.7e-70 269.2 228 62.7
Sopen10g019880 Solanum pennellii HOM05D004481 ORTHO05D005350 2.5e-66 256.5 170 72.9
HPP92_010143 Vanilla planifolia HOM05D004481 ORTHO05D005350 9.8e-63 244.6 191 66.0
BcaNung04162 Brassica carinata HOM05D004481 ORTHO05D005350 5.2e-56 222.2 319 45.8
MCO13G563 Micromonas commoda HOM05D004481 ORTHO05D005350 4.3e-50 202.6 263 42.6
MD00G1108700 Malus domestica HOM05D004481 ORTHO05D005350 3.0e-43 179.9 128 70.3
PRCOL_00000955 Prasinoderma coloniale HOM05D004481 ORTHO05D005350 3.1e-40 169.9 271 35.8
CSS0037652 Camellia sinensis var. sinensis HOM05D004481 ORTHO05D005350 5.2e-40 169.1 152 59.9
BolC3t17849H Brassica oleracea HOM05D004481 ORTHO05D005350 6.4e-38 162.2 151 58.3
BcaC01g03137 Brassica carinata HOM05D004481 ORTHO05D005350 3.5e-36 156.4 152 57.2
C03p55700 Brassica napus HOM05D004481 ORTHO05D005350 1.3e-35 154.5 151 57.0
BcaC08g44162 Brassica carinata HOM05D004481 ORTHO05D005350 1.2e-31 141.4 138 56.5
Cfa024874 Carpinus fangiana HOM05D004481 ORTHO05D005350 2.2e-30 137.1 268 32.1
CBR_g36716 Chara braunii HOM05D004481 ORTHO05D005350 3.8e-30 136.3 113 57.5
Cre17.g734150 Chlamydomonas reinhardtii HOM05D004481 ORTHO05D005350 1.1e-29 134.8 368 28.8
Peaxi162Scf00003g02548 Petunia axillaris HOM05D004481 ORTHO05D005350 2.7e-28 130.2 170 44.7
BcaNung04988 Brassica carinata HOM05D004481 ORTHO05D005350 3.0e-27 126.7 95 68.4
Sopen01g049670 Solanum pennellii HOM05D004481 ORTHO05D005350 2.2e-22 110.5 90 62.2
Hund00159 Selenicereus undatus HOM05D004481 ORTHO05D005350 3.2e-21 106.7 99 54.5
Actinidia34390 Actinidia chinensis HOM05D004481 ORTHO05D005350 4.2e-21 106.3 92 60.9
Sopen01g049660 Solanum pennellii HOM05D004481 ORTHO05D005350 6.0e-20 102.4 79 68.4
RcHm_v2.0_Chr6g0257521 Rosa chinensis HOM05D004481 ORTHO05D005350 1.6e-17 94.4 61 63.9
CSS0039068 Camellia sinensis var. sinensis HOM05D002228 ORTHO05D002347 7.6e-15 85.5 65 66.2
CSS0049178 Camellia sinensis var. sinensis HOM05D002228 ORTHO05D002347 7.6e-15 85.5 65 66.2
PRCOL_00004768 Prasinoderma coloniale HOM05D004481 ORTHO05D005350 3.8e-14 83.2 181 30.9
GSVIVG01003443001 Vitis vinifera HOM05D004481 ORTHO05D005350 4.2e-13 79.7 46 71.7
GSVIVG01003244001 Vitis vinifera HOM05D004481 ORTHO05D005350 7.1e-13 79.0 46 71.7
GSVIVG01030751001 Vitis vinifera HOM05D004481 ORTHO05D005350 7.1e-13 79.0 46 71.7
MD00G1108800 Malus domestica HOM05D004481 ORTHO05D005350 1.6e-12 77.8 139 36.0
Lsat_1_v5_gn_5_116621 Lactuca sativa HOM05D000552 ORTHO05D000469 7.9e-12 75.5 116 41.4
Cfa005651 Carpinus fangiana HOM05D004481 ORTHO05D005350 1.0e-11 75.1 58 70.7
Atru.chr13.2259 Acer truncatum HOM05D004481 ORTHO05D005350 1.8e-11 74.3 79 53.2
Atru.chr7.688 Acer truncatum HOM05D004481 ORTHO05D005350 1.8e-11 74.3 79 53.2
Atru.chr12.2105 Acer truncatum HOM05D004481 ORTHO05D005350 3.9e-11 73.2 83 50.6
Atru.chr3.1909 Acer truncatum HOM05D004481 ORTHO05D005350 3.9e-11 73.2 83 49.4
GSVIVG01030757001 Vitis vinifera HOM05D004481 ORTHO05D005350 1.1e-10 71.6 46 65.2
Solyc01g107420.2 Solanum lycopersicum HOM05D004481 ORTHO05D005350 6.2e-09 65.9 37 81.1
Cfa017289 Carpinus fangiana HOM05D004481 ORTHO05D005350 2.4e-08 63.9 54 64.8
VMungo0251G0056 Vigna mungo HOM05D005531 ORTHO05D006332 5.8e-07 59.3 117 37.6


User provided reference genes

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