Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G01073 Aquilegia oxysepala HOM05D006255 ORTHO05D008014 8.5e-99 364.0 231 100.0
TAR625G0439 Trochodendron aralioides HOM05D006255 ORTHO05D008014 2.3e-83 312.8 231 79.2
Ciclev10029213m.g Citrus clementina HOM05D006255 ORTHO05D008014 6.5e-83 311.2 231 83.1
Nn5g30887 Nelumbo nucifera HOM05D006255 ORTHO05D008014 2.5e-82 309.3 231 80.1
Gohir.A12G035500 Gossypium hirsutum HOM05D006255 ORTHO05D008014 9.8e-79 297.4 231 84.4
TWI31G0945 Tripterygium wilfordii HOM05D006255 ORTHO05D008014 1.7e-78 296.6 231 80.1
vmacro02304 Vaccinium macrocarpon HOM05D006255 ORTHO05D008014 8.3e-78 294.3 228 77.2
Atru.chr5.3479 Acer truncatum HOM05D006255 ORTHO05D008014 3.5e-76 288.9 231 79.2
Sed0016506 Sechium edule HOM05D006255 ORTHO05D008014 1.7e-75 286.6 229 68.1
Manes.11G100600 Manihot esculenta HOM05D006255 ORTHO05D008014 3.8e-75 285.4 231 77.1
arahy.Tifrunner.gnm1.ann1.K7U5ID Arachis hypogaea HOM05D006255 ORTHO05D008014 6.6e-75 284.6 231 75.3
Gohir.D01G162900 Gossypium hirsutum HOM05D006255 ORTHO05D008014 1.5e-74 283.5 231 80.1
Gorai.002G202100 Gossypium raimondii HOM05D006255 ORTHO05D008014 1.5e-74 283.5 231 80.1
Lj9A402T69 Lonicera japonica HOM05D006255 ORTHO05D008014 1.5e-74 283.5 228 77.6
arahy.Tifrunner.gnm1.ann1.5E63QU Arachis hypogaea HOM05D006255 ORTHO05D008014 1.9e-74 283.1 231 74.9
Prupe.8G172600 Prunus persica HOM05D006255 ORTHO05D008014 1.9e-74 283.1 231 79.7
ATR0661G177 Amborella trichopoda HOM05D006255 ORTHO05D008014 2.5e-74 282.7 227 77.1
CSS0039919 Camellia sinensis var. sinensis HOM05D006255 ORTHO05D008014 3.3e-74 282.3 231 71.9
Eucgr.I01476 Eucalyptus grandis HOM05D006255 ORTHO05D008014 1.2e-73 280.4 228 75.4
Duzib248G1128 Durio zibethinus HOM05D006255 ORTHO05D008014 1.6e-73 280.0 231 74.9
Potri.009G140200 Populus trichocarpa HOM05D006255 ORTHO05D008014 2.1e-73 279.6 231 79.2
MBI05_g35101_MAGBIO Magnolia biondii HOM05D006255 ORTHO05D008014 3.6e-73 278.9 227 74.0
PGR142G2886 Punica granatum HOM05D006255 ORTHO05D008014 8.0e-73 277.7 231 74.5
THA.LOC104804084 Tarenaya hassleriana HOM05D006255 ORTHO05D008014 1.4e-72 276.9 231 74.0
Nn6g31846 Nelumbo nucifera HOM05D006255 ORTHO05D008014 5.2e-72 275.0 231 79.7
Actinidia20544 Actinidia chinensis HOM05D006255 ORTHO05D008014 3.4e-71 272.3 229 71.2
CsaV3_7G001410 Cucumis sativus L. HOM05D006255 ORTHO05D008014 5.8e-71 271.6 229 71.2
MELO3C013309.2 Cucumis melo HOM05D006255 ORTHO05D008014 4.9e-70 268.5 229 74.2
Thecc.02G052300 Theobroma cacao HOM05D006255 ORTHO05D008014 1.1e-69 267.3 231 77.9
Medtr3g118350 Medicago truncatula HOM05D006255 ORTHO05D008014 3.2e-69 265.8 228 77.2
Gohir.D12G037200 Gossypium hirsutum HOM05D006255 ORTHO05D008014 1.2e-68 263.8 231 77.9
Gorai.008G038300 Gossypium raimondii HOM05D006255 ORTHO05D008014 1.0e-67 260.8 231 77.9
Sed0013069 Sechium edule HOM05D006255 ORTHO05D008014 5.0e-67 258.5 229 65.5
MSTRG.19958 Avicennia marina HOM05D006255 ORTHO05D008014 8.6e-67 257.7 230 70.0
ClCG02G003730 Citrullus lanatus HOM05D006255 ORTHO05D008014 2.5e-66 256.1 230 67.8
Hma1.2p1_0163F.1_g072870 Hydrangea macrophylla HOM05D006255 ORTHO05D008014 3.3e-66 255.8 229 72.5
MSTRG.16938 Avicennia marina HOM05D006255 ORTHO05D008014 4.3e-66 255.4 230 70.0
CDE02G2216 Ceratophyllum demersum HOM05D006255 ORTHO05D008014 4.3e-66 255.4 231 74.0
PSO675G3819 Papaver somniferum HOM05D006255 ORTHO05D008014 2.1e-65 253.1 231 74.5
Solyc01g111940.4 Solanum lycopersicum HOM05D006255 ORTHO05D008014 2.8e-65 252.7 230 68.3
Lsat_1_v5_gn_8_122201 Lactuca sativa HOM05D006255 ORTHO05D008014 3.6e-65 252.3 226 73.9
COL.COLO4_18000 Corchorus olitorius HOM05D006255 ORTHO05D008014 4.7e-65 251.9 227 74.0
ECA233G3172 Erigeron canadensis HOM05D006255 ORTHO05D008014 4.7e-65 251.9 229 68.1
Sopen01g053990 Solanum pennellii HOM05D006255 ORTHO05D008014 6.2e-65 251.5 230 67.8
HanXRQChr16g0527781 Helianthus annuus HOM05D006255 ORTHO05D008014 1.8e-64 250.0 230 71.7
Os04g0561600 Oryza sativa ssp. japonica HOM05D006255 ORTHO05D008014 3.1e-64 249.2 235 67.2
Cfa005320 Carpinus fangiana HOM05D006255 ORTHO05D010524 8.9e-64 247.7 223 73.5
PGSC0003DMG401018633 Solanum tuberosum HOM05D006255 ORTHO05D008014 1.2e-63 247.3 226 66.8
HPP92_025891 Vanilla planifolia HOM05D006255 ORTHO05D008014 1.2e-63 247.3 227 63.0
Phvul.009G117000 Phaseolus vulgaris HOM05D006255 ORTHO05D008014 2.6e-63 246.1 231 72.7
Nitab4.5_0003603g0130 Nicotiana tabacum HOM05D006255 ORTHO05D008014 5.8e-63 245.0 226 69.5
SGA_v2.0_scaffold32G13327 Striga asiatica HOM05D006255 ORTHO05D008014 7.5e-63 244.6 230 71.3
Actinidia18024 Actinidia chinensis HOM05D006255 ORTHO05D008014 2.2e-62 243.0 229 66.8
Cc09_g10450 Coffea canephora HOM05D006255 ORTHO05D008014 2.2e-62 243.0 226 66.4
Dinv14143 Davidia involucrata HOM05D006255 ORTHO05D008014 3.7e-62 242.3 231 69.3
MD10G1131800 Malus domestica HOM05D006255 ORTHO05D008014 8.3e-62 241.1 231 71.0
Oeu029013.1 Olea europaea HOM05D006255 ORTHO05D008014 2.4e-61 239.6 227 67.8
Nitab4.5_0001506g0010 Nicotiana tabacum HOM05D006255 ORTHO05D008014 4.1e-61 238.8 227 67.8
SalBow1G8078 Salvia bowleyana HOM05D006255 ORTHO05D010524 5.4e-61 238.4 229 72.5
Aa31LG7G15760 Aethionema arabicum HOM05D007460 ORTHO05D009396 7.0e-61 238.0 246 64.6
PSO541G1652 Papaver somniferum HOM05D006255 ORTHO05D008014 7.0e-61 238.0 231 72.3
Nitab4.5_0001629g0040 Nicotiana tabacum HOM05D006255 ORTHO05D008014 2.1e-60 236.5 230 70.4
Peaxi162Scf00362g00349 Petunia axillaris HOM05D006255 ORTHO05D008014 2.1e-60 236.5 228 68.9
CiPaw.05G087400 Carya illinoinensis HOM05D006255 ORTHO05D008014 3.5e-60 235.7 231 71.9
TPR.G38579 Trifolium pratense HOM05D006255 ORTHO05D008014 1.3e-59 233.8 229 68.6
Aa31LG9G40 Aethionema arabicum HOM05D006255 ORTHO05D008014 1.7e-59 233.4 250 62.0
Sabra09G0108900 Salix brachista HOM05D006255 ORTHO05D008014 1.7e-59 233.4 260 64.2
CANSAT25G2216 Cannabis sativa HOM05D006255 ORTHO05D008014 2.3e-59 233.0 231 68.8
Carub.0001s1596 Capsella rubella HOM05D006255 ORTHO05D008014 2.3e-59 233.0 229 65.9
Lj4g0004587 Lotus japonicus HOM05D006255 ORTHO05D008014 2.3e-59 233.0 231 70.6
Sc08g0002620 Simmondsia chinensis HOM05D006255 ORTHO05D008014 2.3e-59 233.0 231 71.0
Nitab4.5_0001215g0050 Nicotiana tabacum HOM05D006255 ORTHO05D008014 3.0e-59 232.6 230 69.1
Cpa.g.sc20.136 Carica papaya HOM05D006255 ORTHO05D008014 6.6e-59 231.5 228 64.0
Ah.01g007960 Amaranthus hybridus HOM05D006255 ORTHO05D008014 1.5e-58 230.3 231 66.7
Glyma.06G001200 Glycine max HOM05D006255 ORTHO05D008014 4.3e-58 228.8 231 67.1
Psat5g000920 Pisum sativum HOM05D006255 ORTHO05D008014 1.2e-57 227.3 231 67.5
unitig_0.g812 Utricularia gibba HOM05D006255 ORTHO05D008014 1.2e-57 227.3 226 65.0
HPP92_022389 Vanilla planifolia HOM05D006255 ORTHO05D008014 2.1e-57 226.5 223 55.6
AL1G28330 Arabidopsis lyrata HOM05D006255 ORTHO05D008014 3.6e-57 225.7 229 64.2
MD05G1128500 Malus domestica HOM05D006255 ORTHO05D008014 3.6e-57 225.7 231 70.1
EL10Ac9g21307 Beta vulgaris HOM05D006255 ORTHO05D008014 6.2e-57 224.9 229 61.1
QL11p053294 Quercus lobata HOM05D006255 ORTHO05D008014 1.1e-56 224.2 229 69.9
Glyma.04G001700 Glycine max HOM05D006255 ORTHO05D008014 4.0e-56 222.2 231 68.4
Os03g0131800 Oryza sativa ssp. japonica HOM05D006255 ORTHO05D008014 6.8e-56 221.5 230 67.0
Lalb_Chr08g0246771 Lupinus albus HOM05D006255 ORTHO05D008014 4.4e-55 218.8 233 64.4
FAN15G2553 Fragaria x ananassa HOM05D006255 ORTHO05D008014 7.5e-55 218.0 228 70.2
Zm00001eb074070 Zea mays HOM05D006255 ORTHO05D008014 7.5e-55 218.0 237 66.2
CARHR016680 Cardamine hirsuta HOM05D006255 ORTHO05D008014 9.9e-55 217.6 229 67.2
AagrBONN_evm.TU.Sc2ySwM_368.1212 Anthoceros agrestis HOM05D006255 ORTHO05D008014 1.3e-54 217.2 228 66.7
Mapoly0058s0055 Marchantia polymorpha HOM05D006255 ORTHO05D008014 2.9e-54 216.1 227 62.6
Ca_15278_v3 Cicer arietinum L. HOM05D006255 ORTHO05D008014 3.7e-54 215.7 229 69.4
Gohir.A01G171900 Gossypium hirsutum HOM05D006255 ORTHO05D008014 3.7e-54 215.7 156 75.6
SMO119G0083 Selaginella moellendorffii HOM05D006255 ORTHO05D008014 4.1e-53 212.2 231 55.0
CBR_g61263 Chara braunii HOM05D006255 ORTHO05D008014 5.4e-53 211.8 227 58.1
Haze_02065 Corylus avellana HOM05D006255 ORTHO05D008014 5.4e-53 211.8 332 51.8
RcHm_v2.0_Chr6g0279491 Rosa chinensis HOM05D006255 ORTHO05D008014 1.7e-51 206.8 227 68.7
FAN27G1328 Fragaria x ananassa HOM05D006255 ORTHO05D008014 1.5e-50 203.8 229 67.2
FvH4_2g15950 Fragaria vesca HOM05D006255 ORTHO05D008014 1.9e-50 203.4 228 67.5
FAN24G2083 Fragaria x ananassa HOM05D006255 ORTHO05D008014 3.3e-50 202.6 229 67.2
BcaB03g14828 Brassica carinata HOM05D006255 ORTHO05D008014 4.3e-50 202.2 229 59.4
Pp3c11_730 Physcomitrium patens HOM05D006255 ORTHO05D008014 7.3e-50 201.4 228 56.6
AT1G16210 Arabidopsis thaliana HOM05D006255 ORTHO05D008014 9.5e-50 201.1 229 58.5
Pp3c11_731 Physcomitrium patens HOM05D006255 ORTHO05D008014 1.2e-49 200.7 228 56.6
Duzib132G0230 Durio zibethinus HOM05D006255 ORTHO05D008014 6.2e-49 198.4 231 67.5
Pp3c7_26990 Physcomitrium patens HOM05D006255 ORTHO05D008014 1.5e-47 193.7 228 51.8
VMungo1309G1654 Vigna mungo HOM05D006255 ORTHO05D008014 2.0e-47 193.4 231 64.9
BcaB03g14827 Brassica carinata HOM05D002002 ORTHO05D008711 1.1e-45 187.6 227 63.9
BolC6t39525H Brassica oleracea HOM05D006255 ORTHO05D008014 2.1e-44 183.3 227 61.2
Sp4g00050 Schrenkiella parvula HOM05D006255 ORTHO05D008014 2.1e-44 183.3 228 61.8
C06p44610 Brassica napus HOM05D002002 ORTHO05D008711 2.7e-44 183.0 227 61.2
BraA07t31267Z Brassica rapa HOM05D006255 ORTHO05D008014 1.0e-43 181.0 227 60.8
A07p37050 Brassica napus HOM05D002002 ORTHO05D008711 2.3e-43 179.9 227 60.4
Lj5C174T15 Lonicera japonica HOM05D006255 ORTHO05D008014 8.7e-43 177.9 227 64.3
AUR62009986 Chenopodium quinoa HOM05D006255 ORTHO05D008014 3.6e-41 172.6 227 56.4
CDE09G0466 Ceratophyllum demersum HOM05D006255 ORTHO05D008014 1.7e-38 163.7 100 80.0
CAN.G1235.32 Capsicum annuum HOM05D006255 ORTHO05D008014 4.9e-38 162.2 189 63.0
Ah.01g023450 Amaranthus hybridus HOM05D000939 ORTHO05D000745 8.4e-38 161.4 212 59.4
AUR62012975 Chenopodium quinoa HOM05D006255 ORTHO05D008014 1.0e-27 127.9 227 49.3
GSVIVG01023898001 Vitis vinifera HOM05D006255 ORTHO05D008014 5.1e-27 125.6 67 89.6
Gohir.A03G206650 Gossypium hirsutum HOM05D006255 ORTHO05D008014 4.3e-26 122.5 232 40.5
Gorai.005G255900 Gossypium raimondii HOM05D006255 ORTHO05D008014 1.1e-24 117.9 232 39.2
Peaxi162Scf00875g00037 Petunia axillaris HOM05D006255 ORTHO05D008014 9.0e-24 114.8 96 60.4
PRCOL_00005063 Prasinoderma coloniale HOM05D006255 ORTHO05D008014 4.5e-23 112.5 229 37.1
C06p36040 Brassica napus HOM05D006255 ORTHO05D008014 1.3e-22 110.9 106 61.3
Cre14.g629500 Chlamydomonas reinhardtii HOM05D006255 ORTHO05D008014 1.7e-22 110.5 226 38.9
BolC6t38725H Brassica oleracea HOM05D006255 ORTHO05D008014 8.4e-22 108.2 69 78.3
Migut.H01073 Erythranthe guttata HOM05D006255 ORTHO05D008014 1.9e-18 97.1 227 43.6
MCO11G585 Micromonas commoda HOM05D006255 ORTHO05D008014 5.8e-15 85.5 160 40.0
PSO541G1702 Papaver somniferum HOM05D006255 ORTHO05D008014 2.5e-13 80.1 92 58.7
BcaC08g45811 Brassica carinata HOM05D006255 ORTHO05D008014 9.0e-08 61.6 51 62.7
Cfa024524 Carpinus fangiana HOM05D006255 ORTHO05D008014 1.3e-06 57.8 78 42.3


User provided reference genes

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