Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G01013 Aquilegia oxysepala HOM05D004607 ORTHO05D005836 7.3e-173 610.5 322 100.0
Nitab4.5_0000702g0180 Nicotiana tabacum HOM05D004607 ORTHO05D005836 2.4e-43 180.3 152 61.2
Solyc02g082710.3 Solanum lycopersicum HOM05D004607 ORTHO05D005836 5.4e-43 179.1 152 59.2
Sopen02g027460 Solanum pennellii HOM05D004607 ORTHO05D005836 1.2e-42 177.9 152 59.2
PGSC0003DMG400001520 Solanum tuberosum HOM05D004607 ORTHO05D005836 7.8e-42 175.3 174 54.0
CAN.G1238.9 Capsicum annuum HOM05D004607 ORTHO05D005836 2.3e-41 173.7 152 59.9
Nitab4.5_0011694g0010 Nicotiana tabacum HOM05D004607 ORTHO05D005836 3.9e-41 172.9 152 59.9
Peaxi162Scf01051g00133 Petunia axillaris HOM05D004607 ORTHO05D005836 6.6e-41 172.2 158 57.0
TAR628G0874 Trochodendron aralioides HOM05D004607 ORTHO05D005836 1.2e-39 167.9 153 58.8
Prupe.7G182100 Prunus persica HOM05D004607 ORTHO05D005836 5.2e-38 162.5 157 59.2
GSVIVG01026644001 Vitis vinifera HOM05D004607 ORTHO05D005836 5.2e-38 162.5 153 56.9
CSS0013050 Camellia sinensis var. sinensis HOM05D004607 ORTHO05D005836 2.0e-37 160.6 154 54.5
Thecc.01G005800 Theobroma cacao HOM05D004607 ORTHO05D005836 2.0e-37 160.6 151 58.9
Haze_03657 Corylus avellana HOM05D004607 ORTHO05D005836 2.6e-37 160.2 152 57.2
Haze_03663 Corylus avellana HOM05D004607 ORTHO05D005836 2.6e-37 160.2 152 57.2
Migut.C01149 Erythranthe guttata HOM05D004607 ORTHO05D005836 2.6e-37 160.2 154 55.2
MD02G1116800 Malus domestica HOM05D004607 ORTHO05D005836 2.6e-37 160.2 157 56.1
Haze_04009 Corylus avellana HOM05D004607 ORTHO05D005836 3.4e-37 159.8 152 57.2
Dinv40187 Davidia involucrata HOM05D004607 ORTHO05D005836 3.4e-37 159.8 154 58.4
MD02G1117000 Malus domestica HOM05D004607 ORTHO05D005836 3.4e-37 159.8 157 56.7
Actinidia17362 Actinidia chinensis HOM05D004607 ORTHO05D005836 4.4e-37 159.5 154 55.2
CiPaw.08G181500 Carya illinoinensis HOM05D004607 ORTHO05D005836 5.8e-37 159.1 152 56.6
Cc07_g11810 Coffea canephora HOM05D004607 ORTHO05D005836 7.6e-37 158.7 144 59.0
Nn2g14487 Nelumbo nucifera HOM05D004607 ORTHO05D005836 7.6e-37 158.7 150 60.0
TWI09G0436 Tripterygium wilfordii HOM05D004607 ORTHO05D005836 7.6e-37 158.7 146 61.6
CSS0035278 Camellia sinensis var. sinensis HOM05D004607 ORTHO05D005836 9.9e-37 158.3 154 53.9
Nitab4.5_0000467g0060 Nicotiana tabacum HOM05D004607 ORTHO05D005836 9.9e-37 158.3 154 54.5
TWI73G0051 Tripterygium wilfordii HOM05D004607 ORTHO05D005836 9.9e-37 158.3 146 61.6
Migut.K01195 Erythranthe guttata HOM05D004607 ORTHO05D005836 1.3e-36 157.9 154 54.5
RcHm_v2.0_Chr2g0097211 Rosa chinensis HOM05D004607 ORTHO05D005836 1.3e-36 157.9 153 56.2
Potri.005G101300 Populus trichocarpa HOM05D004607 ORTHO05D005836 1.7e-36 157.5 146 58.2
Cpa.g.c27001.3 Carica papaya HOM05D004607 ORTHO05D005836 2.2e-36 157.1 152 56.6
vmacro23502 Vaccinium macrocarpon HOM05D004607 ORTHO05D005836 2.9e-36 156.8 155 55.5
FAN28G2666 Fragaria x ananassa HOM05D004607 ORTHO05D005836 4.9e-36 156.0 153 55.6
Actinidia22900 Actinidia chinensis HOM05D004607 ORTHO05D005836 6.4e-36 155.6 154 55.2
Sc16g0000240 Simmondsia chinensis HOM05D004607 ORTHO05D005836 6.4e-36 155.6 153 54.9
CiPaw.07G003100 Carya illinoinensis HOM05D004607 ORTHO05D005836 8.4e-36 155.2 152 53.3
Dinv08165 Davidia involucrata HOM05D004607 ORTHO05D005836 8.4e-36 155.2 154 55.8
ClCG10G000250 Citrullus lanatus HOM05D004607 ORTHO05D005836 1.4e-35 154.5 155 56.8
CsaV3_3G000280 Cucumis sativus L. HOM05D004607 ORTHO05D005836 1.4e-35 154.5 153 56.2
Migut.G00971 Erythranthe guttata HOM05D004607 ORTHO05D005836 1.4e-35 154.5 154 53.9
PSO210G1290 Papaver somniferum HOM05D004607 ORTHO05D005836 1.4e-35 154.5 153 54.2
Thhalv10026376m.g Eutrema salsugineum HOM05D004607 ORTHO05D005836 1.9e-35 154.1 153 54.2
PSO761G0125 Papaver somniferum HOM05D004607 ORTHO05D005836 1.9e-35 154.1 153 54.2
Ciclev10016602m.g Citrus clementina HOM05D004607 ORTHO05D005836 2.4e-35 153.7 154 57.1
Carub.0007s2507 Capsella rubella HOM05D004607 ORTHO05D005836 7.1e-35 152.1 152 52.6
CANSAT80G1685 Cannabis sativa HOM05D004607 ORTHO05D005836 1.6e-34 151.0 146 54.8
CANSAT80G2088 Cannabis sativa HOM05D004607 ORTHO05D005836 1.6e-34 151.0 146 54.8
Eucgr.I00568 Eucalyptus grandis HOM05D004607 ORTHO05D005836 2.7e-34 150.2 145 56.6
Hma1.2p1_0300F.1_g118020 Hydrangea macrophylla HOM05D004607 ORTHO05D005836 2.7e-34 150.2 156 53.2
FvH4_1g10350 Fragaria vesca HOM05D004607 ORTHO05D005836 3.5e-34 149.8 153 54.2
CARHR222820 Cardamine hirsuta HOM05D004607 ORTHO05D005836 4.6e-34 149.4 152 51.3
Lsat_1_v5_gn_3_68061 Lactuca sativa HOM05D004607 ORTHO05D005836 7.8e-34 148.7 154 54.5
PGR042G1958 Punica granatum HOM05D004607 ORTHO05D005836 1.0e-33 148.3 145 55.2
AL7G38550 Arabidopsis lyrata HOM05D004607 ORTHO05D005836 1.3e-33 147.9 152 52.0
Sopen02g012590 Solanum pennellii HOM05D004607 ORTHO05D005836 1.7e-33 147.5 144 52.8
AT4G16444 Arabidopsis thaliana HOM05D004607 ORTHO05D005836 3.0e-33 146.7 152 51.3
SGA_v2.0_scaffold52G18984 Striga asiatica HOM05D004607 ORTHO05D005836 3.0e-33 146.7 154 51.3
A08p12190 Brassica napus HOM05D004607 ORTHO05D005836 5.1e-33 146.0 152 50.7
BolC8t48369H Brassica oleracea HOM05D004607 ORTHO05D005836 5.1e-33 146.0 152 50.7
BraA08t33239Z Brassica rapa HOM05D004607 ORTHO05D005836 5.1e-33 146.0 152 50.7
THA.LOC104819160 Tarenaya hassleriana HOM05D004607 ORTHO05D005836 6.6e-33 145.6 152 51.3
EL10Ac3g05419 Beta vulgaris HOM05D004607 ORTHO05D005836 8.7e-33 145.2 145 52.4
MSTRG.1461 Avicennia marina HOM05D004607 ORTHO05D005836 1.1e-32 144.8 154 52.6
Duzib187G1597 Durio zibethinus HOM05D004607 ORTHO05D005836 1.5e-32 144.4 163 53.4
Solyc02g038815.1 Solanum lycopersicum HOM05D004607 ORTHO05D005836 1.5e-32 144.4 144 52.1
Gorai.010G212400 Gossypium raimondii HOM05D004607 ORTHO05D005836 2.5e-32 143.7 145 54.5
HanXRQChr16g0531851 Helianthus annuus HOM05D004607 ORTHO05D005836 3.3e-32 143.3 154 53.2
MBI11_g22240_MAGBIO Magnolia biondii HOM05D004607 ORTHO05D005836 3.3e-32 143.3 158 53.8
Sp7g14990 Schrenkiella parvula HOM05D004607 ORTHO05D005836 3.3e-32 143.3 152 50.0
BolC7t45311H Brassica oleracea HOM05D004607 ORTHO05D005836 4.3e-32 142.9 154 50.0
A03p49830 Brassica napus HOM05D004607 ORTHO05D005836 7.3e-32 142.1 155 49.7
BraA03t14078Z Brassica rapa HOM05D004607 ORTHO05D005836 7.3e-32 142.1 155 49.7
Atru.chr8.743 Acer truncatum HOM05D004607 ORTHO05D005836 1.3e-31 141.4 134 59.7
AUR62031422 Chenopodium quinoa HOM05D004607 ORTHO05D005836 1.6e-31 141.0 151 51.0
Aa31LG2G12510 Aethionema arabicum HOM05D004607 ORTHO05D005836 3.6e-31 139.8 152 50.7
C07p47890 Brassica napus HOM05D004607 ORTHO05D005836 3.6e-31 139.8 155 50.3
Psat4g104720 Pisum sativum HOM05D004607 ORTHO05D026060 4.8e-31 139.4 168 47.6
FvH4_1g10370 Fragaria vesca HOM05D004607 ORTHO05D005836 6.2e-31 139.0 165 49.1
COL.COLO4_13415 Corchorus olitorius HOM05D004607 ORTHO05D005836 8.1e-31 138.7 136 58.8
Sabra05G0083700 Salix brachista HOM05D004607 ORTHO05D005836 8.1e-31 138.7 131 58.0
Glyma.09G198400 Glycine max HOM05D004607 ORTHO05D005836 1.4e-30 137.9 152 50.0
Lalb_Chr05g0229661 Lupinus albus HOM05D004607 ORTHO05D005836 1.4e-30 137.9 153 50.3
Lj4g0003075 Lotus japonicus HOM05D004607 ORTHO05D005836 4.0e-30 136.3 145 52.4
THA.LOC104826422 Tarenaya hassleriana HOM05D004607 ORTHO05D005836 4.0e-30 136.3 153 50.3
ATR0807G168 Amborella trichopoda HOM05D004607 ORTHO05D005836 5.3e-30 136.0 152 52.0
BcaC07g37988 Brassica carinata HOM05D004607 ORTHO05D005836 5.3e-30 136.0 138 52.9
Migut.M00637 Erythranthe guttata HOM05D004607 ORTHO05D005836 5.3e-30 136.0 109 60.6
AUR62021120 Chenopodium quinoa HOM05D004607 ORTHO05D005836 6.9e-30 135.6 153 50.3
Ca_02856_v3 Cicer arietinum L. HOM05D004607 ORTHO05D005836 9.0e-30 135.2 144 50.7
FAN26G2101 Fragaria x ananassa HOM05D004607 ORTHO05D005836 1.2e-29 134.8 184 44.6
Medtr8g073600 Medicago truncatula HOM05D004607 ORTHO05D005836 1.5e-29 134.4 144 52.8
HanXRQChr09g0259831 Helianthus annuus HOM05D004607 ORTHO05D005836 5.8e-29 132.5 145 53.8
Lalb_Chr05g0214781 Lupinus albus HOM05D004607 ORTHO05D005836 5.8e-29 132.5 149 52.3
Lalb_Chr09g0324751 Lupinus albus HOM05D004607 ORTHO05D005836 5.8e-29 132.5 152 48.7
Duzib264G0749 Durio zibethinus HOM05D004607 ORTHO05D005836 1.3e-28 131.3 136 55.9
Sed0016741 Sechium edule HOM05D004607 ORTHO05D005836 1.7e-28 131.0 110 60.9
unitig_26.g9912 Utricularia gibba HOM05D004607 ORTHO05D005836 1.7e-28 131.0 146 47.9
Nitab4.5_0001365g0040 Nicotiana tabacum HOM05D004607 ORTHO05D005836 3.8e-28 129.8 152 48.0
ECA246G3880 Erigeron canadensis HOM05D004607 ORTHO05D005836 4.9e-28 129.4 145 50.3
Zm00001eb320900 Zea mays HOM05D004607 ORTHO05D005836 8.4e-28 128.6 146 50.7
Migut.N00197 Erythranthe guttata HOM05D004607 ORTHO05D005836 5.4e-27 125.9 133 50.4
BcaNung00194 Brassica carinata HOM05D004607 ORTHO05D005836 7.1e-27 125.6 140 48.6
Os06g0198700 Oryza sativa ssp. japonica HOM05D004607 ORTHO05D005836 1.2e-26 124.8 144 49.3
CDE05G3414 Ceratophyllum demersum HOM05D004607 ORTHO05D005836 1.6e-26 124.4 114 59.6
arahy.Tifrunner.gnm1.ann1.322DBQ Arachis hypogaea HOM05D004607 ORTHO05D005836 2.1e-26 124.0 147 47.6
arahy.Tifrunner.gnm1.ann1.WAU4HL Arachis hypogaea HOM05D004607 ORTHO05D005836 2.1e-26 124.0 147 47.6
Lj2g0013322 Lotus japonicus HOM05D004607 ORTHO05D005836 2.7e-26 123.6 150 47.3
Glyma.11G085750 Glycine max HOM05D004607 ORTHO05D005836 3.5e-26 123.2 144 50.7
Hund00045 Selenicereus undatus HOM05D004607 ORTHO05D005836 4.6e-26 122.9 156 46.2
Glyma.01G158900 Glycine max HOM05D004607 ORTHO05D005836 7.9e-26 122.1 152 47.4
Lsat_1_v5_gn_8_112021 Lactuca sativa HOM05D000005 ORTHO05D000012 7.9e-26 122.1 117 57.3
TPR.G33861 Trifolium pratense HOM05D004607 ORTHO05D005836 1.8e-25 120.9 139 51.1
Zm00001eb373950 Zea mays HOM05D004607 ORTHO05D005836 3.0e-25 120.2 144 45.8
CDE05G1839 Ceratophyllum demersum HOM05D001594 ORTHO05D006997 3.9e-25 119.8 159 45.3
TAR376G0723 Trochodendron aralioides HOM05D004607 ORTHO05D005836 3.9e-25 119.8 115 58.3
Psat0s2561g0240 Pisum sativum HOM05D004607 ORTHO05D005836 5.1e-25 119.4 137 51.1
ECA232G4775 Erigeron canadensis HOM05D004607 ORTHO05D005836 6.7e-25 119.0 145 49.7
Phvul.002G116550 Phaseolus vulgaris HOM05D004607 ORTHO05D005836 1.6e-23 114.4 137 47.4
unitig_749.g13934 Utricularia gibba HOM05D004607 ORTHO05D005836 2.8e-23 113.6 133 45.1
CAN.G328.18 Capsicum annuum HOM05D004607 ORTHO05D005836 1.1e-22 111.7 102 53.9
SalBow7G0705 Salvia bowleyana HOM05D004607 ORTHO05D005836 1.8e-22 110.9 194 38.1
Phvul.003G269900 Phaseolus vulgaris HOM05D004607 ORTHO05D005836 2.4e-22 110.5 148 43.2
HPP92_002453 Vanilla planifolia HOM05D004607 ORTHO05D005836 6.9e-22 109.0 153 45.8
SalBow7G2290 Salvia bowleyana HOM05D004607 ORTHO05D005836 1.2e-21 108.2 187 39.0
SalBow7G4137 Salvia bowleyana HOM05D004607 ORTHO05D005836 1.2e-21 108.2 195 37.9
Rhsim10G0196300 Rhododendron simsii HOM05D004607 ORTHO05D005836 1.4e-19 101.3 75 66.7
TPR.G21990 Trifolium pratense HOM05D004607 ORTHO05D005836 6.7e-17 92.4 144 38.9
Manes.14G160966 Manihot esculenta HOM05D004607 ORTHO05D005836 7.4e-16 89.0 154 37.0
QL06p052929 Quercus lobata HOM05D004607 ORTHO05D005836 7.4e-16 89.0 66 59.1
Peaxi162Scf00580g00027 Petunia axillaris HOM05D004607 ORTHO05D005836 9.6e-16 88.6 88 56.8
MD15G1231800 Malus domestica HOM05D004607 ORTHO05D005836 2.1e-15 87.4 69 55.1
VMungo1215G0163 Vigna mungo HOM05D004607 ORTHO05D005836 2.6e-13 80.5 114 48.2
SGA_v2.0_scaffold24G10477 Striga asiatica HOM05D004607 ORTHO05D005836 5.8e-13 79.3 66 50.0
Duzib147G0723 Durio zibethinus HOM05D004607 ORTHO05D005836 1.7e-12 77.8 82 57.3
QL06p052933 Quercus lobata HOM05D004607 ORTHO05D005836 1.7e-12 77.8 82 59.8
MELO3C013722.2 Cucumis melo HOM05D004607 ORTHO05D005836 4.9e-12 76.3 83 56.6
AagrBONN_evm.TU.Sc2ySwM_362.230 Anthoceros agrestis HOM05D004607 ORTHO05D005836 6.5e-12 75.9 138 39.9
PGSC0003DMG400017476 Solanum tuberosum HOM05D004607 ORTHO05D005836 2.5e-11 73.9 58 51.7
Gohir.D06G180900 Gossypium hirsutum HOM05D004607 ORTHO05D005836 1.2e-10 71.6 75 58.7
CSS0045229 Camellia sinensis var. sinensis HOM05D004607 ORTHO05D005836 1.6e-10 71.2 87 49.4
FAN23G1441 Fragaria x ananassa HOM05D004607 ORTHO05D005836 2.1e-10 70.9 86 52.3
Glyma.16G116500 Glycine max HOM05D004607 ORTHO05D005836 4.6e-10 69.7 90 50.0
Gohir.A06G172006 Gossypium hirsutum HOM05D004607 ORTHO05D005836 1.0e-09 68.6 75 56.0
Mapoly0007s0238 Marchantia polymorpha HOM05D004607 ORTHO05D005836 2.5e-08 63.9 136 32.4
Pp3c7_8860 Physcomitrium patens HOM05D004607 ORTHO05D005836 5.7e-08 62.8 138 37.0
VMungo0251G1148 Vigna mungo HOM05D004607 ORTHO05D005836 6.3e-07 59.3 48 68.8
VMungo0703G0001 Vigna mungo HOM05D004607 ORTHO05D005836 6.3e-07 59.3 48 68.8
Rhsim10G0196100 Rhododendron simsii HOM05D004607 ORTHO05D005836 1.1e-06 58.5 112 41.1
FAN19G1486 Fragaria x ananassa HOM05D004607 ORTHO05D005836 1.8e-06 57.8 95 46.3


User provided reference genes

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