Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G00865 Aquilegia oxysepala HOM05D005585 ORTHO05D006905 1.2e-149 533.1 259 100.0
Aqoxy5G00867 Aquilegia oxysepala HOM05D005585 ORTHO05D006905 3.3e-144 515.0 258 96.5
Nn5g30598 Nelumbo nucifera HOM05D005585 ORTHO05D006905 4.4e-104 381.7 259 73.4
Dinv20235 Davidia involucrata HOM05D005585 ORTHO05D006905 7.5e-104 380.9 258 72.1
TAR628G0421 Trochodendron aralioides HOM05D005585 ORTHO05D006905 7.5e-104 380.9 258 70.9
CSS0043300 Camellia sinensis var. sinensis HOM05D005585 ORTHO05D006905 3.2e-102 375.6 258 68.2
Manes.06G004600 Manihot esculenta HOM05D005585 ORTHO05D006905 1.3e-100 370.2 258 69.4
QL10p030702 Quercus lobata HOM05D005585 ORTHO05D006905 3.9e-100 368.6 257 67.7
FAN08G0665 Fragaria x ananassa HOM05D005585 ORTHO05D006905 1.9e-99 366.3 258 69.0
Lj2g0015776 Lotus japonicus HOM05D005585 ORTHO05D006905 5.6e-99 364.8 259 69.1
RcHm_v2.0_Chr7g0178161 Rosa chinensis HOM05D005585 ORTHO05D006905 7.3e-99 364.4 258 68.6
Cc04_g06090 Coffea canephora HOM05D005585 ORTHO05D006905 9.5e-99 364.0 258 68.2
Thecc.03G059000 Theobroma cacao HOM05D005585 ORTHO05D006905 9.5e-99 364.0 258 69.0
GSVIVG01008457001 Vitis vinifera HOM05D005585 ORTHO05D006905 1.2e-98 363.6 258 67.8
PSO017G0826 Papaver somniferum HOM05D005585 ORTHO05D006905 1.6e-98 363.2 261 69.7
Potri.012G045200 Populus trichocarpa HOM05D005585 ORTHO05D006905 1.6e-98 363.2 258 68.2
Glyma.07G103200 Glycine max HOM05D005585 ORTHO05D006905 8.1e-98 360.9 258 69.4
PGSC0003DMG400005757 Solanum tuberosum HOM05D005585 ORTHO05D006905 8.1e-98 360.9 260 69.6
TAR628G1367 Trochodendron aralioides HOM05D005585 ORTHO05D006905 8.1e-98 360.9 255 68.6
Hma1.2p1_0163F.1_g072970 Hydrangea macrophylla HOM05D005585 ORTHO05D006905 1.1e-97 360.5 257 69.3
Phvul.004G149700 Phaseolus vulgaris HOM05D005585 ORTHO05D006905 1.1e-97 360.5 259 68.7
Psat1g030240 Pisum sativum HOM05D005585 ORTHO05D006905 1.1e-97 360.5 259 67.2
FvH4_5g17500 Fragaria vesca HOM05D005585 ORTHO05D006905 1.4e-97 360.1 258 67.8
PSO170G1171 Papaver somniferum HOM05D005585 ORTHO05D006905 1.4e-97 360.1 262 68.7
CiPaw.15G144600 Carya illinoinensis HOM05D005585 ORTHO05D006905 2.4e-97 359.4 258 67.4
MD06G1228400 Malus domestica HOM05D005585 ORTHO05D006905 2.4e-97 359.4 261 66.3
Medtr6g069850 Medicago truncatula HOM05D005585 ORTHO05D006905 2.4e-97 359.4 258 67.4
ATR1153G069 Amborella trichopoda HOM05D005585 ORTHO05D006905 6.8e-97 357.8 263 67.3
CANSAT80G1087 Cannabis sativa HOM05D005585 ORTHO05D006905 6.8e-97 357.8 258 66.3
Prupe.5G234900 Prunus persica HOM05D005585 ORTHO05D006905 1.2e-96 357.1 259 66.4
CANSAT80G2587 Cannabis sativa HOM05D005585 ORTHO05D006905 2.0e-96 356.3 258 66.3
CsaV3_1G007220 Cucumis sativus L. HOM05D005585 ORTHO05D006905 2.0e-96 356.3 259 66.0
MELO3C002139.2 Cucumis melo HOM05D005585 ORTHO05D006905 2.6e-96 355.9 259 66.8
Glyma.09G174400 Glycine max HOM05D005585 ORTHO05D006905 2.6e-96 355.9 256 68.8
TPR.G8624 Trifolium pratense HOM05D005585 ORTHO05D006905 2.6e-96 355.9 260 67.3
Lalb_Chr22g0353511 Lupinus albus HOM05D005585 ORTHO05D006905 3.4e-96 355.5 258 68.6
Sed0009200 Sechium edule HOM05D005585 ORTHO05D006905 1.7e-95 353.2 258 65.9
Ca_25346_v3 Cicer arietinum L. HOM05D005585 ORTHO05D006905 2.2e-95 352.8 258 67.1
VMungo0464G1491 Vigna mungo HOM05D005585 ORTHO05D006905 2.2e-95 352.8 247 70.0
Gohir.A09G175000 Gossypium hirsutum HOM05D005585 ORTHO05D006905 3.8e-95 352.1 258 67.1
Peaxi162Scf00314g00335 Petunia axillaris HOM05D005585 ORTHO05D006905 3.8e-95 352.1 259 67.6
PGR044G1909 Punica granatum HOM05D005585 ORTHO05D006905 3.8e-95 352.1 261 65.1
COL.COLO4_28892 Corchorus olitorius HOM05D005585 ORTHO05D006905 4.9e-95 351.7 261 67.0
DCAR_003540 Daucus carota HOM05D005585 ORTHO05D006905 1.1e-94 350.5 256 68.4
Lalb_Chr14g0370621 Lupinus albus HOM05D005585 ORTHO05D006905 1.1e-94 350.5 258 67.1
THA.LOC104821828 Tarenaya hassleriana HOM05D005585 ORTHO05D006905 1.1e-94 350.5 259 67.2
TWI60G0738 Tripterygium wilfordii HOM05D005585 ORTHO05D006905 2.4e-94 349.4 258 65.5
Lj5C159G17 Lonicera japonica HOM05D005585 ORTHO05D006905 4.2e-94 348.6 245 67.8
Duzib068G1453 Durio zibethinus HOM05D005585 ORTHO05D006905 7.1e-94 347.8 259 66.4
arahy.Tifrunner.gnm1.ann1.8TLB5V Arachis hypogaea HOM05D005585 ORTHO05D006905 9.2e-94 347.4 259 66.0
AUR62001019 Chenopodium quinoa HOM05D005585 ORTHO05D006905 2.1e-93 346.3 258 64.7
Ciclev10015784m.g Citrus clementina HOM05D005585 ORTHO05D006905 2.7e-93 345.9 258 65.9
Nitab4.5_0001264g0050 Nicotiana tabacum HOM05D005585 ORTHO05D006905 3.5e-93 345.5 258 67.8
Gorai.006G191400 Gossypium raimondii HOM05D005585 ORTHO05D006905 7.8e-93 344.4 258 65.9
Hund22311 Selenicereus undatus HOM05D005585 ORTHO05D006905 1.7e-92 343.2 258 63.2
ECA236G2254 Erigeron canadensis HOM05D005585 ORTHO05D006905 2.3e-92 342.8 259 63.7
Lsat_1_v5_gn_8_83620 Lactuca sativa HOM05D005585 ORTHO05D006905 3.9e-92 342.0 261 64.0
Thhalv10021015m.g Eutrema salsugineum HOM05D005585 ORTHO05D006905 8.7e-92 340.9 259 63.7
AL3G31080 Arabidopsis lyrata HOM05D005585 ORTHO05D006905 1.2e-90 337.0 261 62.1
Eucgr.B00886 Eucalyptus grandis HOM05D005585 ORTHO05D006905 2.8e-90 335.9 258 63.6
A01p36480 Brassica napus HOM05D005585 ORTHO05D006905 3.6e-90 335.5 258 62.8
BraA01t03712Z Brassica rapa HOM05D005585 ORTHO05D006905 3.6e-90 335.5 258 62.8
MSTRG.6190 Avicennia marina HOM05D005585 ORTHO05D006905 1.1e-89 334.0 258 65.5
ClCG04G010560 Citrullus lanatus HOM05D005585 ORTHO05D006905 1.1e-89 334.0 259 62.2
Rhsim08G0150200 Rhododendron simsii HOM05D005585 ORTHO05D006905 1.1e-89 334.0 234 67.1
BcaC05g28739 Brassica carinata HOM05D005585 ORTHO05D006905 1.4e-89 333.6 257 61.9
C05p48400 Brassica napus HOM05D005585 ORTHO05D006905 1.4e-89 333.6 258 62.0
BolC5t33576H Brassica oleracea HOM05D005585 ORTHO05D006905 1.4e-89 333.6 257 61.9
BcaB06g25853 Brassica carinata HOM05D005585 ORTHO05D006905 1.8e-89 333.2 260 62.3
AT3G17910 Arabidopsis thaliana HOM05D005585 ORTHO05D006905 2.4e-89 332.8 258 60.1
Carub.0003s1764 Capsella rubella HOM05D005585 ORTHO05D006905 2.4e-89 332.8 258 60.5
HanXRQChr06g0178071 Helianthus annuus HOM05D005585 ORTHO05D006905 3.1e-89 332.4 261 63.2
Haze_18886 Corylus avellana HOM05D005585 ORTHO05D006905 4.0e-89 332.0 240 65.0
Oeu026263.1 Olea europaea HOM05D005585 ORTHO05D006905 4.0e-89 332.0 237 65.8
Sp3g16030 Schrenkiella parvula HOM05D005585 ORTHO05D006905 4.0e-89 332.0 258 62.0
MD14G1237600 Malus domestica HOM05D005585 ORTHO05D006905 5.3e-89 331.6 258 62.8
BcaC09g48755 Brassica carinata HOM05D005585 ORTHO05D006905 6.9e-89 331.3 260 62.3
A05p31890 Brassica napus HOM05D005585 ORTHO05D006905 6.9e-89 331.3 258 61.2
C01p46240 Brassica napus HOM05D005585 ORTHO05D006905 6.9e-89 331.3 260 62.3
BolC1t04585H Brassica oleracea HOM05D005585 ORTHO05D006905 6.9e-89 331.3 260 62.3
BraA05t22021Z Brassica rapa HOM05D005585 ORTHO05D006905 6.9e-89 331.3 258 61.2
Solyc03g118610.4 Solanum lycopersicum HOM05D005585 ORTHO05D006905 2.6e-88 329.3 258 65.9
Sc12g0007980 Simmondsia chinensis HOM05D005585 ORTHO05D006905 4.4e-88 328.6 236 64.8
Migut.I00267 Erythranthe guttata HOM05D005585 ORTHO05D006905 5.8e-88 328.2 261 64.0
FAN04G2668 Fragaria x ananassa HOM05D005585 ORTHO05D006905 7.6e-88 327.8 234 67.1
CARHR093240 Cardamine hirsuta HOM05D005585 ORTHO05D006905 9.9e-88 327.4 260 61.2
arahy.Tifrunner.gnm1.ann1.E1YKD2 Arachis hypogaea HOM05D005585 ORTHO05D006905 2.9e-87 325.9 236 66.1
BcaB04g20808 Brassica carinata HOM05D005585 ORTHO05D006905 4.9e-87 325.1 258 62.0
Sabra12G0031400 Salix brachista HOM05D005585 ORTHO05D006905 8.4e-87 324.3 236 65.7
Sopen03g037560 Solanum pennellii HOM05D005585 ORTHO05D006905 1.4e-86 323.6 258 65.1
Aa31LG8G4780 Aethionema arabicum HOM05D005585 ORTHO05D006905 2.4e-86 322.8 259 61.8
Ah.06g192310 Amaranthus hybridus HOM05D005585 ORTHO05D008527 4.2e-86 322.0 257 59.9
FAN18G2151 Fragaria x ananassa HOM05D005585 ORTHO05D006905 4.2e-86 322.0 234 65.8
CAN.G843.48 Capsicum annuum HOM05D005585 ORTHO05D006905 1.6e-85 320.1 285 59.3
Zm00001eb007820 Zea mays HOM05D005585 ORTHO05D006905 2.1e-85 319.7 256 62.9
SalBow7G1179 Salvia bowleyana HOM05D005585 ORTHO05D006905 1.7e-84 316.6 260 61.2
Os03g0200700 Oryza sativa ssp. japonica HOM05D005585 ORTHO05D006905 2.3e-84 316.2 262 59.9
vmacro08951 Vaccinium macrocarpon HOM05D005585 ORTHO05D006905 6.6e-84 314.7 280 57.1
HPP92_019169 Vanilla planifolia HOM05D005585 ORTHO05D006905 1.3e-82 310.5 257 58.4
Nitab4.5_0010397g0010 Nicotiana tabacum HOM05D005585 ORTHO05D006905 1.8e-81 306.6 238 64.7
EL10Ac4g09125 Beta vulgaris HOM05D005585 ORTHO05D006905 3.4e-80 302.4 236 60.2
Cpa.g.c34889 Carica papaya HOM05D005585 ORTHO05D006905 7.6e-80 301.2 221 65.2
CDE04G0750 Ceratophyllum demersum HOM05D001130 ORTHO05D006905 9.9e-80 300.8 274 58.8
AUR62004935 Chenopodium quinoa HOM05D005585 ORTHO05D006905 1.9e-78 296.6 223 62.8
QL12p007232 Quercus lobata HOM05D005585 ORTHO05D006905 3.5e-77 292.4 401 41.9
Hma1.2p1_0163F.1_g072980 Hydrangea macrophylla HOM05D005585 ORTHO05D006905 1.3e-71 273.9 201 65.2
Eucgr.B00986 Eucalyptus grandis HOM05D005585 ORTHO05D006905 1.9e-70 270.0 198 64.1
unitig_27.g25108 Utricularia gibba HOM05D005585 ORTHO05D006905 4.2e-70 268.9 259 55.2
Gohir.D09G170128 Gossypium hirsutum HOM05D005585 ORTHO05D006905 4.5e-64 248.8 177 67.2
Mapoly0094s0071 Marchantia polymorpha HOM05D005585 ORTHO05D006905 1.6e-58 230.3 264 45.5
SMO147G0391 Selaginella moellendorffii HOM05D005585 ORTHO05D006905 5.3e-57 225.3 260 43.1
Pp3c5_4480 Physcomitrium patens HOM05D005585 ORTHO05D006905 1.7e-55 220.3 271 44.6
Cpa.g.sc3.377 Carica papaya HOM05D005585 ORTHO05D006905 1.4e-52 210.7 152 63.8
Thhalv10011732m.g Eutrema salsugineum HOM05D005585 ORTHO05D006905 2.3e-52 209.9 246 44.3
AL1G55160 Arabidopsis lyrata HOM05D005585 ORTHO05D006905 4.3e-51 205.7 242 44.2
SEGI_34948 Sequoiadendron giganteum HOM05D005585 ORTHO05D006905 6.3e-50 201.8 153 61.4
BcaB04g20806 Brassica carinata HOM05D005585 ORTHO05D006905 5.9e-48 195.3 186 53.8
CARHR038140 Cardamine hirsuta HOM05D005585 ORTHO05D006905 7.7e-48 194.9 246 41.9
AagrBONN_evm.TU.Sc2ySwM_340.176 Anthoceros agrestis HOM05D005585 ORTHO05D006905 1.3e-47 194.1 262 42.4
AT1G48510 Arabidopsis thaliana HOM05D005585 ORTHO05D006905 1.1e-46 191.0 241 41.9
TAR628G1286 Trochodendron aralioides HOM05D005585 ORTHO05D006905 1.4e-46 190.7 130 64.6
Carub.0001s3764 Capsella rubella HOM05D005585 ORTHO05D006905 2.1e-45 186.8 238 42.4
Carub.0001s3763 Capsella rubella HOM05D005585 ORTHO05D006905 2.6e-40 169.9 231 43.3
CBR_g50834 Chara braunii HOM05D002601 ORTHO05D002884 1.3e-39 167.5 354 31.9
Zm00001eb338430 Zea mays HOM05D005585 ORTHO05D006905 4.2e-38 162.5 92 77.2
BcaB08g34867 Brassica carinata HOM05D005585 ORTHO05D006905 3.6e-37 159.5 238 38.2
SGA_v2.0_scaffold58G20371 Striga asiatica HOM05D005585 ORTHO05D006905 6.1e-37 158.7 140 60.0
Zm00001eb099110 Zea mays HOM05D005585 ORTHO05D006905 3.5e-32 142.9 118 59.3
PRCOL_00002102 Prasinoderma coloniale HOM05D005585 ORTHO05D006905 5.0e-31 139.0 273 31.5
Cre16.g664700 Chlamydomonas reinhardtii HOM05D005585 ORTHO05D006905 5.2e-20 102.4 290 28.3
SEGI_19570 Sequoiadendron giganteum HOM05D005585 ORTHO05D006905 5.7e-19 99.0 84 58.3
FAN13G1174 Fragaria x ananassa HOM05D005585 ORTHO05D006905 4.1e-17 92.8 72 66.7
MCO16G342 Micromonas commoda HOM05D005585 ORTHO05D006905 4.2e-14 82.8 197 27.4
Gohir.D09G170071 Gossypium hirsutum HOM05D005585 ORTHO05D006905 1.2e-13 81.3 67 62.7
CBR_g629 Chara braunii HOM05D005585 ORTHO05D006905 8.9e-12 75.1 179 29.1
CDE07G0810 Ceratophyllum demersum HOM05D005585 ORTHO05D006905 3.9e-07 59.7 79 46.8


User provided reference genes

Program Settings