Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G00863 Aquilegia oxysepala HOM05D007769 ORTHO05D009588 2.8e-33 144.8 79 100.0
PSO017G3300 Papaver somniferum HOM05D007769 ORTHO05D009588 1.6e-20 102.4 79 73.4
PSO170G4501 Papaver somniferum HOM05D007769 ORTHO05D009588 1.6e-20 102.4 79 73.4
Potri.014G015866 Populus trichocarpa HOM05D007769 ORTHO05D009588 1.3e-19 99.4 76 75.0
COL.COLO4_28504 Corchorus olitorius HOM05D007769 ORTHO05D009588 1.7e-19 99.0 76 73.7
CiPaw.07G174700 Carya illinoinensis HOM05D007769 ORTHO05D009588 5.1e-19 97.4 76 72.4
Manes.05G182100 Manihot esculenta HOM05D007769 ORTHO05D009588 1.5e-18 95.9 76 72.4
Lj5g0000132 Lotus japonicus HOM05D007769 ORTHO05D009588 1.9e-18 95.5 79 68.4
CSS0007942 Camellia sinensis var. sinensis HOM05D007769 ORTHO05D009588 4.3e-18 94.4 76 76.3
Gohir.D01G110800 Gossypium hirsutum HOM05D007769 ORTHO05D009588 5.6e-18 94.0 76 69.7
Actinidia08247 Actinidia chinensis HOM05D007769 ORTHO05D009588 7.3e-18 93.6 76 76.3
Eucgr.F02251 Eucalyptus grandis HOM05D007769 ORTHO05D009588 1.6e-17 92.4 79 69.6
Potri.002G118366 Populus trichocarpa HOM05D007769 ORTHO05D009588 2.1e-17 92.0 76 71.1
PGR031G3105 Punica granatum HOM05D007769 ORTHO05D009588 2.1e-17 92.0 79 68.4
THA.LOC104825778 Tarenaya hassleriana HOM05D007769 ORTHO05D009588 2.1e-17 92.0 76 69.7
Actinidia38106 Actinidia chinensis HOM05D007769 ORTHO05D009588 3.6e-17 91.3 76 73.7
unitig_8.g5043 Utricularia gibba HOM05D007769 ORTHO05D009588 6.2e-17 90.5 76 67.1
Gohir.D05G213500 Gossypium hirsutum HOM05D007769 ORTHO05D009588 8.1e-17 90.1 74 71.6
Gorai.009G220200 Gossypium raimondii HOM05D007769 ORTHO05D009588 8.1e-17 90.1 74 71.6
TWI12G0690 Tripterygium wilfordii HOM05D007769 ORTHO05D009588 1.1e-16 89.7 75 69.3
Medtr1g018020 Medicago truncatula HOM05D007769 ORTHO05D009588 1.4e-16 89.4 79 63.3
Psat6g018200 Pisum sativum HOM05D007769 ORTHO05D009588 1.4e-16 89.4 79 63.3
TPR.G37744 Trifolium pratense HOM05D007769 ORTHO05D009588 1.4e-16 89.4 79 67.1
Sabra02G0093000 Salix brachista HOM05D007769 ORTHO05D009588 3.1e-16 88.2 71 73.2
Sabra14G0009800 Salix brachista HOM05D007769 ORTHO05D009588 3.1e-16 88.2 71 73.2
Duzib093G1544 Durio zibethinus HOM05D007769 ORTHO05D009588 4.0e-16 87.8 76 67.1
Atru.chr13.834 Acer truncatum HOM05D007769 ORTHO05D009588 1.2e-15 86.3 74 66.2
Sed0024574 Sechium edule HOM05D007769 ORTHO05D009588 1.2e-15 86.3 79 65.8
Ca_13216_v3 Cicer arietinum L. HOM05D007769 ORTHO05D009588 2.0e-15 85.5 79 60.8
TWI56G0221 Tripterygium wilfordii HOM05D007769 ORTHO05D009588 2.6e-15 85.1 75 68.0
Ciclev10003023m.g Citrus clementina HOM05D007769 ORTHO05D009588 4.5e-15 84.3 71 70.4
Glyma.17G234900 Glycine max HOM05D007769 ORTHO05D009588 2.2e-14 82.0 79 64.6
MELO3C010803.2 Cucumis melo HOM05D007769 ORTHO05D009588 2.9e-14 81.6 79 62.0
CARHR277820 Cardamine hirsuta HOM05D007769 ORTHO05D009588 3.8e-14 81.3 74 62.2
HanXRQChr02g0039171 Helianthus annuus HOM05D007769 ORTHO05D009588 4.9e-14 80.9 77 63.6
Lsat_1_v5_gn_4_131941 Lactuca sativa HOM05D007769 ORTHO05D009588 4.9e-14 80.9 77 64.9
SalBow7G0030 Salvia bowleyana HOM05D007769 ORTHO05D009588 6.4e-14 80.5 76 61.8
Carub.0008s2472 Capsella rubella HOM05D007769 ORTHO05D009588 1.1e-13 79.7 74 62.2
Glyma.14G089015 Glycine max HOM05D007769 ORTHO05D009588 1.9e-13 79.0 79 63.3
Aa31LG2G19320 Aethionema arabicum HOM05D007769 ORTHO05D009588 2.4e-13 78.6 74 60.8
ECA232G2369 Erigeron canadensis HOM05D007769 ORTHO05D009588 2.4e-13 78.6 77 63.6
Gohir.A05G210200 Gossypium hirsutum HOM05D007769 ORTHO05D009588 2.4e-13 78.6 76 63.2
CDE04G0481 Ceratophyllum demersum HOM05D007769 ORTHO05D009588 4.2e-13 77.8 79 65.8
Nn1g04547 Nelumbo nucifera HOM05D007769 ORTHO05D009588 4.2e-13 77.8 82 59.8
AL8G41140 Arabidopsis lyrata HOM05D007769 ORTHO05D009588 2.1e-12 75.5 74 59.5
BcaNung04624 Brassica carinata HOM05D007769 ORTHO05D009588 3.5e-12 74.7 74 56.8
Gohir.A01G123201 Gossypium hirsutum HOM05D007769 ORTHO05D009588 6.0e-12 73.9 90 53.3
arahy.Tifrunner.gnm1.ann1.3X0B87 Arachis hypogaea HOM05D007769 ORTHO05D009588 1.0e-11 73.2 72 62.5
CsaV3_2G026100 Cucumis sativus L. HOM05D007769 ORTHO05D009588 1.3e-11 72.8 74 60.8
arahy.Tifrunner.gnm1.ann1.5K9QCS Arachis hypogaea HOM05D007769 ORTHO05D009588 1.8e-11 72.4 72 62.5
BcaC04g23346 Brassica carinata HOM05D007769 ORTHO05D009588 2.3e-11 72.0 74 56.8
EL10Ac1g02381 Beta vulgaris HOM05D007769 ORTHO05D009588 3.0e-11 71.6 74 59.5
Sed0002164 Sechium edule HOM05D007769 ORTHO05D009588 3.0e-11 71.6 74 60.8
AT5G63905 Arabidopsis thaliana HOM05D007769 ORTHO05D009588 3.9e-11 71.2 74 58.1
Gorai.002G135600 Gossypium raimondii HOM05D007769 ORTHO05D009588 5.1e-11 70.9 79 57.0
Nn5g30603 Nelumbo nucifera HOM05D007769 ORTHO05D009588 6.7e-11 70.5 83 55.4
ClCG08G016510 Citrullus lanatus HOM05D007769 ORTHO05D009588 1.5e-10 69.3 74 60.8
HPP92_006078 Vanilla planifolia HOM05D007769 ORTHO05D009588 1.9e-10 68.9 74 62.2
SGA_v2.0_scaffold238G43959 Striga asiatica HOM05D007769 ORTHO05D009588 9.6e-10 66.6 71 57.7
A09p08470 Brassica napus HOM05D007769 ORTHO05D009588 1.3e-09 66.2 71 56.3
BraA09t36497Z Brassica rapa HOM05D007769 ORTHO05D009588 1.3e-09 66.2 71 56.3
C09p09600 Brassica napus HOM05D007769 ORTHO05D009588 2.8e-09 65.1 71 56.3
BolC9t53870H Brassica oleracea HOM05D007769 ORTHO05D009588 2.8e-09 65.1 71 56.3
Rhsim07G0219800 Rhododendron simsii HOM05D007769 ORTHO05D009588 3.7e-09 64.7 91 53.8
Haze_22434 Corylus avellana HOM05D007769 ORTHO05D009588 4.8e-09 64.3 87 48.3
Migut.C00485 Erythranthe guttata HOM05D007769 ORTHO05D009588 6.2e-09 63.9 76 52.6
Sp2g26970 Schrenkiella parvula HOM05D007769 ORTHO05D009588 6.2e-09 63.9 74 52.7
Thhalv10005134m.g Eutrema salsugineum HOM05D007769 ORTHO05D009588 8.1e-09 63.5 74 52.7
Lalb_Chr14g0368191 Lupinus albus HOM05D007769 ORTHO05D009588 1.2e-07 59.7 79 49.4
CANSAT78G2421 Cannabis sativa HOM05D007769 ORTHO05D009588 1.5e-07 59.3 78 47.4
Phvul.001G027800 Phaseolus vulgaris HOM05D007769 ORTHO05D009588 2.6e-07 58.5 76 51.3
QL12p038109 Quercus lobata HOM05D007769 ORTHO05D009588 2.6e-07 58.5 101 45.5
Dinv39221 Davidia involucrata HOM05D007769 ORTHO05D009588 5.8e-07 57.4 76 52.6
AagrBONN_evm.TU.Sc2ySwM_344.2823 Anthoceros agrestis HOM05D007769 ORTHO05D009588 2.2e-06 55.5 74 51.4
Thecc.08G088600 Theobroma cacao HOM05D007769 ORTHO05D009588 4.9e-06 54.3 34 79.4


User provided reference genes

Program Settings