Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G00849 Aquilegia oxysepala HOM05D006690 ORTHO05D008541 9.0e-159 563.5 285 100.0
LjContig00222g0026492 Lotus japonicus HOM05D006690 ORTHO05D008541 3.3e-108 395.6 290 72.1
GSVIVG01036428001 Vitis vinifera HOM05D006690 ORTHO05D008541 3.3e-108 395.6 235 81.3
Dinv09402 Davidia involucrata HOM05D006690 ORTHO05D008541 4.3e-108 395.2 290 71.7
Nn5g27416 Nelumbo nucifera HOM05D006690 ORTHO05D008541 4.3e-108 395.2 300 70.7
TAR628G1481 Trochodendron aralioides HOM05D006690 ORTHO05D008541 1.8e-106 389.8 290 70.3
Potri.019G073900 Populus trichocarpa HOM05D006690 ORTHO05D008541 8.9e-106 387.5 256 76.2
Gohir.D05G254800 Gossypium hirsutum HOM05D006690 ORTHO05D008541 4.4e-105 385.2 236 80.9
Gorai.009G266300 Gossypium raimondii HOM05D006690 ORTHO05D008541 4.4e-105 385.2 251 77.7
Lj9A700T90 Lonicera japonica HOM05D006690 ORTHO05D008541 4.4e-105 385.2 289 70.6
Gohir.A05G252900 Gossypium hirsutum HOM05D006690 ORTHO05D008541 5.8e-105 384.8 251 77.3
Hma1.2p1_0442F.1_g153970 Hydrangea macrophylla HOM05D006690 ORTHO05D008541 5.8e-105 384.8 292 70.5
MBI06_g35694_MAGBIO Magnolia biondii HOM05D006690 ORTHO05D008541 9.8e-105 384.0 292 68.8
Nitab4.5_0004761g0020 Nicotiana tabacum HOM05D006690 ORTHO05D008541 9.8e-105 384.0 294 69.0
Glyma.01G231900 Glycine max HOM05D006690 ORTHO05D008541 1.7e-104 383.3 279 72.0
Manes.02G208400 Manihot esculenta HOM05D006690 ORTHO05D008541 1.7e-104 383.3 232 80.6
COL.COLO4_14973 Corchorus olitorius HOM05D006690 ORTHO05D008541 2.9e-104 382.5 270 74.1
Peaxi162Scf00078g00341 Petunia axillaris HOM05D006690 ORTHO05D008541 4.9e-104 381.7 289 70.2
Nitab4.5_0010632g0010 Nicotiana tabacum HOM05D006690 ORTHO05D008541 1.1e-103 380.6 294 69.0
AUR62022402 Chenopodium quinoa HOM05D006690 ORTHO05D008541 3.2e-103 379.0 294 68.7
Manes.18G119400 Manihot esculenta HOM05D006690 ORTHO05D008541 3.2e-103 379.0 234 78.2
CiPaw.03G016600 Carya illinoinensis HOM05D006690 ORTHO05D008541 9.2e-103 377.5 231 77.5
Cfa008102 Carpinus fangiana HOM05D006690 ORTHO05D008541 1.2e-102 377.1 234 79.5
Duzib177G0086 Durio zibethinus HOM05D006690 ORTHO05D008541 1.2e-102 377.1 235 79.1
DCAR_017362 Daucus carota HOM05D006690 ORTHO05D008541 1.6e-102 376.7 291 67.7
Cpa.g.sc21.64 Carica papaya HOM05D006690 ORTHO05D008541 4.6e-102 375.2 264 69.3
AUR62043541 Chenopodium quinoa HOM05D006690 ORTHO05D008541 4.6e-102 375.2 291 68.7
PSO017G7034 Papaver somniferum HOM05D006690 ORTHO05D008541 4.6e-102 375.2 287 67.9
QL09p003717 Quercus lobata HOM05D006690 ORTHO05D008541 4.6e-102 375.2 288 68.8
Haze_13934 Corylus avellana HOM05D006690 ORTHO05D008541 6.0e-102 374.8 274 69.3
PSO170G2989 Papaver somniferum HOM05D006690 ORTHO05D008541 7.8e-102 374.4 286 67.8
Eucgr.F02968 Eucalyptus grandis HOM05D006690 ORTHO05D008541 2.3e-101 372.9 288 68.4
arahy.Tifrunner.gnm1.ann1.PSIH1X Arachis hypogaea HOM05D006690 ORTHO05D008541 3.0e-101 372.5 323 63.8
CAN.G83.1 Capsicum annuum HOM05D006690 ORTHO05D008541 3.0e-101 372.5 288 70.1
Sopen11g018800 Solanum pennellii HOM05D006690 ORTHO05D008541 5.0e-101 371.7 291 69.1
ClCG08G000730 Citrullus lanatus HOM05D006690 ORTHO05D008541 8.6e-101 370.9 233 76.4
CsaV3_5G040160 Cucumis sativus L. HOM05D006690 ORTHO05D008541 1.1e-100 370.5 233 76.4
HanXRQChr04g0102641 Helianthus annuus HOM05D006690 ORTHO05D008541 1.1e-100 370.5 286 65.4
Solyc11g042640.2 Solanum lycopersicum HOM05D006690 ORTHO05D008541 1.1e-100 370.5 291 68.7
CSS0006473 Camellia sinensis var. sinensis HOM05D006690 ORTHO05D008541 1.9e-100 369.8 290 66.6
VMungo1215G2418 Vigna mungo HOM05D006690 ORTHO05D008541 1.9e-100 369.8 281 68.7
A07p37760 Brassica napus HOM05D006690 ORTHO05D008541 4.3e-100 368.6 288 66.7
BraA07t31340Z Brassica rapa HOM05D006690 ORTHO05D008541 4.3e-100 368.6 288 66.7
CSS0045264 Camellia sinensis var. sinensis HOM05D006690 ORTHO05D008541 4.3e-100 368.6 290 66.2
Lalb_Chr16g0376791 Lupinus albus HOM05D006690 ORTHO05D008541 4.3e-100 368.6 246 76.4
EL10Ac1g01712 Beta vulgaris HOM05D006690 ORTHO05D008541 7.3e-100 367.9 244 73.8
MELO3C022193.2 Cucumis melo HOM05D006690 ORTHO05D008541 7.3e-100 367.9 233 76.0
Psat0s3069g0040 Pisum sativum HOM05D006690 ORTHO05D008541 9.5e-100 367.5 228 77.6
PGSC0003DMG400017809 Solanum tuberosum HOM05D006690 ORTHO05D008541 9.5e-100 367.5 285 69.8
Atru.chr13.2467 Acer truncatum HOM05D006690 ORTHO05D008541 1.2e-99 367.1 271 69.0
ECA247G0737 Erigeron canadensis HOM05D006690 ORTHO05D008541 1.2e-99 367.1 284 65.1
Sabra19G0085000 Salix brachista HOM05D006690 ORTHO05D008541 1.6e-99 366.7 299 65.9
Thecc.08G174200 Theobroma cacao HOM05D006690 ORTHO05D008541 1.6e-99 366.7 273 69.6
Actinidia23025 Actinidia chinensis HOM05D006690 ORTHO05D008541 2.8e-99 365.9 285 68.4
PGR042G1281 Punica granatum HOM05D006690 ORTHO05D008541 2.8e-99 365.9 280 67.9
TWI75G0001 Tripterygium wilfordii HOM05D006690 ORTHO05D008541 2.8e-99 365.9 235 77.0
CANSAT21G2558 Cannabis sativa HOM05D006690 ORTHO05D008541 3.6e-99 365.5 296 65.5
Medtr5g008750 Medicago truncatula HOM05D006690 ORTHO05D008541 3.6e-99 365.5 276 68.5
Ca_24481_v3 Cicer arietinum L. HOM05D006690 ORTHO05D008541 6.2e-99 364.8 228 76.3
Aa31LG4G9090 Aethionema arabicum HOM05D006690 ORTHO05D008541 1.4e-98 363.6 292 64.7
Ah.05g168760 Amaranthus hybridus HOM05D006690 ORTHO05D008541 1.8e-98 363.2 266 69.9
ATR1089G004 Amborella trichopoda HOM05D006690 ORTHO05D008541 1.8e-98 363.2 253 73.1
MD15G1137600 Malus domestica HOM05D006690 ORTHO05D008541 3.1e-98 362.5 250 73.6
MSTRG.1587 Avicennia marina HOM05D006690 ORTHO05D008541 4.0e-98 362.1 290 66.6
Sc02g0003840 Simmondsia chinensis HOM05D006690 ORTHO05D008541 4.0e-98 362.1 234 75.6
Carub.0002s1836 Capsella rubella HOM05D006690 ORTHO05D008541 6.8e-98 361.3 228 76.3
CDE05G2117 Ceratophyllum demersum HOM05D006690 ORTHO05D008541 6.8e-98 361.3 272 68.8
AT1G71500 Arabidopsis thaliana HOM05D006690 ORTHO05D008541 2.0e-97 359.8 230 76.1
CARHR291180 Cardamine hirsuta HOM05D006690 ORTHO05D008541 2.6e-97 359.4 230 76.1
Sp5g26650 Schrenkiella parvula HOM05D006690 ORTHO05D008541 4.4e-97 358.6 242 73.6
Lsat_1_v5_gn_1_25180 Lactuca sativa HOM05D006690 ORTHO05D008541 5.8e-97 358.2 281 65.5
Rhsim12G0004800 Rhododendron simsii HOM05D006690 ORTHO05D008541 7.5e-97 357.8 270 69.6
BcaC08g46585 Brassica carinata HOM05D006690 ORTHO05D008541 1.7e-96 356.7 294 63.6
C06p45640 Brassica napus HOM05D006690 ORTHO05D008541 1.7e-96 356.7 294 63.6
THA.LOC104800085 Tarenaya hassleriana HOM05D006690 ORTHO05D008541 3.7e-96 355.5 270 69.3
RcHm_v2.0_Chr2g0123251 Rosa chinensis HOM05D006690 ORTHO05D008541 4.9e-96 355.1 277 67.5
SGA_v2.0_scaffold24G10633 Striga asiatica HOM05D006690 ORTHO05D008541 4.9e-96 355.1 235 74.5
AL2G31160 Arabidopsis lyrata HOM05D006690 ORTHO05D008541 8.3e-96 354.4 292 64.4
SalBow7G1428 Salvia bowleyana HOM05D006690 ORTHO05D008541 8.3e-96 354.4 270 68.1
Thhalv10018960m.g Eutrema salsugineum HOM05D006690 ORTHO05D008541 1.1e-95 354.0 294 63.3
Prupe.1G128000 Prunus persica HOM05D006690 ORTHO05D008541 4.1e-95 352.1 244 73.4
Sed0015713 Sechium edule HOM05D006690 ORTHO05D008541 1.2e-94 350.5 227 74.9
Cc10_g09110 Coffea canephora HOM05D006690 ORTHO05D008541 2.1e-94 349.7 209 81.3
Ciclev10021386m.g Citrus clementina HOM05D006690 ORTHO05D008541 2.7e-94 349.4 235 72.8
arahy.Tifrunner.gnm1.ann1.M9KTRI Arachis hypogaea HOM05D006690 ORTHO05D008541 6.0e-94 348.2 366 54.6
Zm00001eb142810 Zea mays HOM05D006690 ORTHO05D008541 1.0e-93 347.4 239 72.8
FAN19G1869 Fragaria x ananassa HOM05D006690 ORTHO05D008541 1.3e-93 347.1 266 68.8
FAN23G3093 Fragaria x ananassa HOM05D006690 ORTHO05D008541 1.3e-93 347.1 230 76.5
FAN28G2783 Fragaria x ananassa HOM05D006690 ORTHO05D008541 1.3e-93 347.1 230 76.5
Migut.C01361 Erythranthe guttata HOM05D006690 ORTHO05D008541 3.0e-93 345.9 285 65.6
FAN26G2368 Fragaria x ananassa HOM05D006690 ORTHO05D008541 3.9e-93 345.5 230 76.1
Oeu023205.1 Olea europaea HOM05D006690 ORTHO05D008541 6.6e-93 344.7 344 57.6
unitig_8.g4892 Utricularia gibba HOM05D006690 ORTHO05D008541 8.6e-93 344.4 271 65.3
HPP92_019451 Vanilla planifolia HOM05D006690 ORTHO05D008541 1.1e-92 344.0 241 72.2
SGA_v2.0_scaffold118G32591 Striga asiatica HOM05D006690 ORTHO05D008541 1.5e-92 343.6 235 73.6
Phvul.002G035200 Phaseolus vulgaris HOM05D006690 ORTHO05D008541 5.8e-89 331.6 206 79.6
SEGI_25869 Sequoiadendron giganteum HOM05D006690 ORTHO05D008541 5.8e-89 331.6 232 67.7
Os11g0242400 Oryza sativa ssp. japonica HOM05D006690 ORTHO05D008541 6.6e-85 318.2 235 67.2
vmacro22748 Vaccinium macrocarpon HOM05D006690 ORTHO05D008541 1.0e-77 294.3 247 64.0
TPR.G37964 Trifolium pratense HOM05D006690 ORTHO05D008541 2.5e-76 289.7 283 57.6
CDE05G3037 Ceratophyllum demersum HOM05D006690 ORTHO05D008541 6.9e-74 281.6 196 73.0
Mapoly0043s0097 Marchantia polymorpha HOM05D006690 ORTHO05D008541 6.4e-72 275.0 232 57.3
Pp3c6_9090 Physcomitrium patens HOM05D006690 ORTHO05D008541 1.0e-69 267.7 235 57.9
Nitab4.5_0003013g0020 Nicotiana tabacum HOM05D006690 ORTHO05D008541 3.9e-69 265.8 209 69.4
SMO139G0118 Selaginella moellendorffii HOM05D006690 ORTHO05D008541 8.7e-69 264.6 202 62.9
FvH4_1g25280 Fragaria vesca HOM05D006690 ORTHO05D008541 1.6e-67 260.4 207 68.6
CDE05G1864 Ceratophyllum demersum HOM05D006690 ORTHO05D008541 1.2e-65 254.2 168 73.2
AagrBONN_evm.TU.Sc2ySwM_228.501 Anthoceros agrestis HOM05D006690 ORTHO05D008541 1.6e-62 243.8 205 58.5
vmacro00956 Vaccinium macrocarpon HOM05D006690 ORTHO05D008541 2.6e-41 173.3 304 39.8
QL09p003724 Quercus lobata HOM05D006690 ORTHO05D008541 1.7e-35 154.1 169 52.7
MCO14G230 Micromonas commoda HOM05D006690 ORTHO05D008541 3.8e-32 142.9 261 35.6
GSVIVG01034644001 Vitis vinifera HOM05D006690 ORTHO05D008541 6.5e-32 142.1 95 76.8
PRCOL_00001119 Prasinoderma coloniale HOM05D006690 ORTHO05D008541 2.5e-31 140.2 156 44.9
Cre09.g411200 Chlamydomonas reinhardtii HOM05D006690 ORTHO05D008541 4.2e-31 139.4 233 37.3
QL09p003744 Quercus lobata HOM05D006690 ORTHO05D008541 6.7e-29 132.1 93 74.2
SGA_v2.0_scaffold7G03910 Striga asiatica HOM05D006690 ORTHO05D008541 1.2e-25 121.3 85 71.8
unitig_578.g16121 Utricularia gibba HOM05D006690 ORTHO05D008541 4.7e-22 109.4 128 43.0
GSVIVG01036421001 Vitis vinifera HOM05D006690 ORTHO05D008541 3.4e-12 76.6 81 53.1
Cre02.g093650 Chlamydomonas reinhardtii HOM05D006690 ORTHO05D044287 1.2e-06 58.2 103 33.0
MCO05G575 Micromonas commoda HOM05D006690 ORTHO05D044287 1.2e-06 58.2 120 33.3


User provided reference genes

Program Settings