Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G00815 Aquilegia oxysepala HOM05D003497 ORTHO05D003964 6.0e-163 577.4 284 100.0
Nn6g34530 Nelumbo nucifera HOM05D003497 ORTHO05D003964 1.0e-61 241.1 286 47.9
Nn3g19312 Nelumbo nucifera HOM05D003497 ORTHO05D003964 1.1e-60 237.7 288 47.2
PSO017G1612 Papaver somniferum HOM05D003497 ORTHO05D003964 2.0e-57 226.9 311 45.0
PSO170G5054 Papaver somniferum HOM05D003497 ORTHO05D003964 1.9e-55 220.3 311 44.4
TAR625G0452 Trochodendron aralioides HOM05D003497 ORTHO05D003964 1.2e-54 217.6 285 47.7
CSS0013379 Camellia sinensis var. sinensis HOM05D003497 ORTHO05D003964 4.6e-54 215.7 285 46.0
TAR381G0023 Trochodendron aralioides HOM05D003497 ORTHO05D003964 1.0e-53 214.5 228 54.4
CSS0047045 Camellia sinensis var. sinensis HOM05D003497 ORTHO05D003964 1.7e-53 213.8 287 45.3
Sabra05G0090000 Salix brachista HOM05D003497 ORTHO05D003964 3.6e-51 206.1 282 43.6
Potri.005G109700 Populus trichocarpa HOM05D003497 ORTHO05D003964 2.4e-50 203.4 278 43.2
CSS0013739 Camellia sinensis var. sinensis HOM05D003497 ORTHO05D003964 4.0e-50 202.6 237 47.7
DCAR_021943 Daucus carota HOM05D003497 ORTHO05D003964 9.0e-50 201.4 271 44.6
CSS0043603 Camellia sinensis var. sinensis HOM05D003497 ORTHO05D003964 1.5e-49 200.7 248 46.8
Rhsim05G0093000 Rhododendron simsii HOM05D003497 ORTHO05D003964 1.5e-49 200.7 284 44.7
CAN.G911.43 Capsicum annuum HOM05D003497 ORTHO05D003964 3.4e-49 199.5 286 43.7
Lj5g0015963 Lotus japonicus HOM05D003497 ORTHO05D003964 3.4e-49 199.5 280 44.3
Oeu025307.1 Olea europaea HOM05D003497 ORTHO05D003964 9.9e-49 198.0 288 39.9
Sed0023460 Sechium edule HOM05D003497 ORTHO05D003964 1.7e-48 197.2 276 43.1
GSVIVG01037051001 Vitis vinifera HOM05D003497 ORTHO05D003964 8.4e-48 194.9 293 43.7
Nitab4.5_0000003g0710 Nicotiana tabacum HOM05D003497 ORTHO05D003964 1.1e-47 194.5 283 44.2
CiPaw.06G163900 Carya illinoinensis HOM05D003497 ORTHO05D003964 1.9e-47 193.7 286 42.0
Cc02_g20070 Coffea canephora HOM05D003497 ORTHO05D003964 4.2e-47 192.6 289 40.8
Nitab4.5_0003918g0020 Nicotiana tabacum HOM05D003497 ORTHO05D003964 4.2e-47 192.6 284 44.4
Prupe.8G150500 Prunus persica HOM05D003497 ORTHO05D003964 4.2e-47 192.6 285 41.1
Haze_10291 Corylus avellana HOM05D003497 ORTHO05D003964 5.5e-47 192.2 247 41.7
Eucgr.I02495 Eucalyptus grandis HOM05D003497 ORTHO05D003964 5.5e-47 192.2 282 41.5
vmacro22257 Vaccinium macrocarpon HOM05D003497 ORTHO05D003964 7.1e-47 191.8 289 42.6
TWI14G1256 Tripterygium wilfordii HOM05D003497 ORTHO05D003964 1.6e-46 190.7 275 43.6
Manes.07G056700 Manihot esculenta HOM05D003497 ORTHO05D003964 3.5e-46 189.5 227 47.1
MSTRG.16671 Avicennia marina HOM05D003497 ORTHO05D003964 6.0e-46 188.7 291 40.5
Actinidia28001 Actinidia chinensis HOM05D000349 ORTHO05D003964 7.9e-46 188.3 294 42.9
ATR0739G052 Amborella trichopoda HOM05D003497 ORTHO05D003964 7.9e-46 188.3 296 41.2
Duzib132G0146 Durio zibethinus HOM05D003497 ORTHO05D003964 7.9e-46 188.3 289 40.5
QL11p029247 Quercus lobata HOM05D003497 ORTHO05D003964 1.0e-45 188.0 262 42.4
MBI16_g32073_MAGBIO Magnolia biondii HOM05D003497 ORTHO05D003964 1.3e-45 187.6 282 42.2
AUR62027025 Chenopodium quinoa HOM05D003497 ORTHO05D003964 2.3e-45 186.8 281 39.9
Sopen01g002980 Solanum pennellii HOM05D003497 ORTHO05D003964 3.0e-45 186.4 286 41.6
Gohir.A13G047900 Gossypium hirsutum HOM05D003497 ORTHO05D003964 1.5e-44 184.1 288 40.6
Solyc01g006990.4 Solanum lycopersicum HOM05D003497 ORTHO05D003964 1.5e-44 184.1 286 41.3
Thecc.02G120200 Theobroma cacao HOM05D003497 ORTHO05D003964 2.5e-44 183.3 284 40.8
PGSC0003DMG400021329 Solanum tuberosum HOM05D003497 ORTHO05D003964 3.3e-44 183.0 286 40.6
Peaxi162Scf00152g00641 Petunia axillaris HOM05D003497 ORTHO05D003964 5.6e-44 182.2 294 41.2
Ciclev10028208m.g Citrus clementina HOM05D003497 ORTHO05D003964 9.6e-44 181.4 288 38.2
Ah.01g007110 Amaranthus hybridus HOM05D003497 ORTHO05D003964 1.6e-43 180.6 282 39.7
Eucgr.G00280 Eucalyptus grandis HOM05D003497 ORTHO05D003964 2.1e-43 180.3 274 42.0
Gorai.013G052000 Gossypium raimondii HOM05D003497 ORTHO05D003964 2.8e-43 179.9 288 40.6
CsaV3_4G000070 Cucumis sativus L. HOM05D003497 ORTHO05D003964 4.8e-43 179.1 282 38.3
AUR62030867 Chenopodium quinoa HOM05D003497 ORTHO05D003964 6.2e-43 178.7 281 38.8
COL.COLO4_32482 Corchorus olitorius HOM05D003497 ORTHO05D003964 6.2e-43 178.7 275 42.9
unitig_744.g24206 Utricularia gibba HOM05D003497 ORTHO05D003964 6.2e-43 178.7 284 37.0
Atru.chr5.2290 Acer truncatum HOM05D003497 ORTHO05D003964 8.1e-43 178.3 226 42.9
MELO3C018024.2 Cucumis melo HOM05D003497 ORTHO05D003964 1.1e-42 177.9 280 38.6
ClCG10G010030 Citrullus lanatus HOM05D003497 ORTHO05D003964 1.4e-42 177.6 289 38.4
Migut.B00464 Erythranthe guttata HOM05D003497 ORTHO05D003964 1.8e-42 177.2 263 41.1
Gohir.D13G046300 Gossypium hirsutum HOM05D003497 ORTHO05D003964 3.1e-42 176.4 288 40.3
SGA_v2.0_scaffold225G43063 Striga asiatica HOM05D003497 ORTHO05D003964 3.1e-42 176.4 288 38.5
EL10Ac9g22176 Beta vulgaris HOM05D003497 ORTHO05D003964 6.9e-42 175.3 262 40.5
PGR142G0099 Punica granatum HOM05D003497 ORTHO05D003964 6.9e-42 175.3 280 39.3
Cfa004695 Carpinus fangiana HOM05D003497 ORTHO05D003964 1.5e-41 174.1 253 41.9
Ca_11026_v3 Cicer arietinum L. HOM05D003497 ORTHO05D003964 2.6e-41 173.3 284 41.5
Atru.chr5.2286 Acer truncatum HOM05D003497 ORTHO05D003964 4.5e-41 172.6 266 39.1
TPR.G21155 Trifolium pratense HOM05D003497 ORTHO05D003964 2.2e-40 170.2 281 40.2
CDE04G1396 Ceratophyllum demersum HOM05D003497 ORTHO05D003964 3.8e-40 169.5 273 41.0
HanXRQChr16g0502181 Helianthus annuus HOM05D003497 ORTHO05D003964 3.8e-40 169.5 285 38.9
arahy.Tifrunner.gnm1.ann1.6MCD86 Arachis hypogaea HOM05D003497 ORTHO05D003964 4.9e-40 169.1 284 37.3
VMungo0720G1031 Vigna mungo HOM05D003497 ORTHO05D003964 6.5e-40 168.7 269 40.9
FvH4_2g03310 Fragaria vesca HOM05D003497 ORTHO05D003964 8.4e-40 168.3 279 38.4
FAN20G1538 Fragaria x ananassa HOM05D003497 ORTHO05D003964 8.4e-40 168.3 278 37.8
FAN20G2306 Fragaria x ananassa HOM05D003497 ORTHO05D003964 8.4e-40 168.3 278 37.8
HPP92_007713 Vanilla planifolia HOM05D003497 ORTHO05D003964 8.4e-40 168.3 285 38.6
CANSAT25G1915 Cannabis sativa HOM05D003497 ORTHO05D003964 1.1e-39 167.9 285 38.9
Aa31LG7G7660 Aethionema arabicum HOM05D003497 ORTHO05D003964 3.2e-39 166.4 263 39.9
Lsat_1_v5_gn_5_117220 Lactuca sativa HOM05D003497 ORTHO05D003964 5.5e-39 165.6 284 38.0
Medtr1g106020 Medicago truncatula HOM05D003497 ORTHO05D003964 5.5e-39 165.6 295 39.7
Phvul.007G047200 Phaseolus vulgaris HOM05D003497 ORTHO05D003964 5.5e-39 165.6 269 40.1
FAN27G0942 Fragaria x ananassa HOM05D003497 ORTHO05D003964 2.7e-38 163.3 279 37.6
Psat6g213160 Pisum sativum HOM05D003497 ORTHO05D003964 2.7e-38 163.3 281 39.9
RcHm_v2.0_Chr6g0248431 Rosa chinensis HOM05D003497 ORTHO05D003964 6.0e-38 162.2 308 34.1
Medtr4g019560 Medicago truncatula HOM05D003497 ORTHO05D003964 1.0e-37 161.4 240 40.8
Medtr7g057330 Medicago truncatula HOM05D003497 ORTHO05D003964 1.0e-37 161.4 245 42.0
Sc18g0007350 Simmondsia chinensis HOM05D003497 ORTHO05D003964 1.0e-37 161.4 279 38.4
Carub.0001s2329 Capsella rubella HOM05D003497 ORTHO05D003964 3.0e-37 159.8 261 39.5
THA.LOC104822142 Tarenaya hassleriana HOM05D003497 ORTHO05D003964 3.0e-37 159.8 281 39.1
SEGI_36088 Sequoiadendron giganteum HOM05D003497 ORTHO05D003964 3.9e-37 159.5 297 36.0
Glyma.20G135900 Glycine max HOM05D003497 ORTHO05D003964 5.1e-37 159.1 287 36.9
ECA234G0007 Erigeron canadensis HOM05D003497 ORTHO05D003964 6.7e-37 158.7 281 37.7
Lalb_Chr06g0164971 Lupinus albus HOM05D003497 ORTHO05D003964 2.5e-36 156.8 282 38.3
AT1G23780 Arabidopsis thaliana HOM05D003497 ORTHO05D003964 7.4e-36 155.2 224 40.2
Gorai.005G229700 Gossypium raimondii HOM05D003497 ORTHO05D003964 9.6e-36 154.8 271 36.5
SalBow6G6060 Salvia bowleyana HOM05D003497 ORTHO05D003964 9.6e-36 154.8 209 40.7
AL1G37530 Arabidopsis lyrata HOM05D003497 ORTHO05D003964 1.3e-35 154.5 224 40.6
Gohir.A03G180900 Gossypium hirsutum HOM05D003497 ORTHO05D003964 2.8e-35 153.3 271 36.2
Gohir.D02G203142 Gossypium hirsutum HOM05D003497 ORTHO05D004787 2.8e-35 153.3 271 36.2
Sp7g01980 Schrenkiella parvula HOM05D003497 ORTHO05D003964 3.7e-35 152.9 225 40.4
Haze_10298 Corylus avellana HOM05D003497 ORTHO05D003964 4.8e-35 152.5 232 38.4
Glyma.10G255600 Glycine max HOM05D003497 ORTHO05D003964 8.2e-35 151.8 284 37.3
TWI14G0922 Tripterygium wilfordii HOM05D003497 ORTHO05D003964 8.2e-35 151.8 210 42.4
MD10G1110300 Malus domestica HOM05D003497 ORTHO05D003964 1.4e-34 151.0 217 38.7
Sp1g21160 Schrenkiella parvula HOM05D003497 ORTHO05D003964 1.4e-34 151.0 223 41.3
Ciclev10028907m.g Citrus clementina HOM05D003497 ORTHO05D003964 1.8e-34 150.6 224 42.9
C07p20260 Brassica napus HOM05D003497 ORTHO05D003964 2.4e-34 150.2 269 40.9
BolC7t42548H Brassica oleracea HOM05D003497 ORTHO05D003964 2.4e-34 150.2 269 40.9
Thhalv10009461m.g Eutrema salsugineum HOM05D003497 ORTHO05D003964 2.4e-34 150.2 226 40.7
THA.LOC104824678 Tarenaya hassleriana HOM05D003497 ORTHO05D003964 3.1e-34 149.8 276 36.6
A07p13790 Brassica napus HOM05D003497 ORTHO05D003964 5.3e-34 149.1 280 38.6
BcaC06g35052 Brassica carinata HOM05D003497 ORTHO05D003964 6.9e-34 148.7 269 40.5
BcaB03g14136 Brassica carinata HOM05D003497 ORTHO05D003964 9.0e-34 148.3 221 41.6
BraA07t29128Z Brassica rapa HOM05D003497 ORTHO05D003964 1.2e-33 147.9 270 40.0
AT1G23770 Arabidopsis thaliana HOM05D003497 ORTHO05D003964 4.5e-33 146.0 291 38.1
CARHR024190 Cardamine hirsuta HOM05D003497 ORTHO05D003964 1.7e-32 144.1 287 34.8
Eucgr.H03378 Eucalyptus grandis HOM05D003497 ORTHO05D003964 2.2e-32 143.7 229 40.6
AL1G37520 Arabidopsis lyrata HOM05D003497 ORTHO05D003964 1.1e-31 141.4 266 38.3
Migut.B00470 Erythranthe guttata HOM05D003497 ORTHO05D003964 1.1e-31 141.4 272 33.5
Migut.B00469 Erythranthe guttata HOM05D003497 ORTHO05D003964 5.5e-31 139.0 209 39.7
Dinv09537 Davidia involucrata HOM05D006380 ORTHO05D008400 7.9e-30 135.2 290 34.8
Cpa.g.c35687 Carica papaya HOM05D003497 ORTHO05D003964 1.8e-29 134.0 177 41.8
BolC4t26586H Brassica oleracea HOM05D003497 ORTHO05D003964 5.1e-29 132.5 249 37.3
Phvul.005G029000 Phaseolus vulgaris HOM05D003497 ORTHO05D003964 6.7e-29 132.1 231 37.2
Phvul.005G037100 Phaseolus vulgaris HOM05D003497 ORTHO05D003964 6.7e-29 132.1 207 38.2
C04p49930 Brassica napus HOM05D003497 ORTHO05D003964 1.5e-28 131.0 260 35.8
Phvul.005G029200 Phaseolus vulgaris HOM05D003497 ORTHO05D003964 2.5e-28 130.2 214 38.8
Os03g0232000 Oryza sativa ssp. japonica HOM05D003497 ORTHO05D003964 3.3e-28 129.8 280 33.2
MD10G1110600 Malus domestica HOM05D003497 ORTHO05D003964 7.4e-28 128.6 227 37.0
PSO170G0850 Papaver somniferum HOM05D003497 ORTHO05D003964 7.4e-28 128.6 224 38.8
BraA04t17199Z Brassica rapa HOM05D003497 ORTHO05D003964 9.7e-28 128.3 256 36.7
CARHR164020 Cardamine hirsuta HOM05D003497 ORTHO05D003964 1.6e-27 127.5 225 39.1
PSO017G7033 Papaver somniferum HOM05D003497 ORTHO05D003964 1.6e-27 127.5 224 38.8
A04p15640 Brassica napus HOM05D003497 ORTHO05D003964 2.8e-27 126.7 256 37.1
MD05G1106300 Malus domestica HOM05D003497 ORTHO05D003964 2.8e-27 126.7 296 35.8
Carub.0001s2328 Capsella rubella HOM05D003497 ORTHO05D003964 6.3e-27 125.6 225 36.0
Carub.0002s1705 Capsella rubella HOM05D003497 ORTHO05D003964 6.3e-27 125.6 223 36.8
RcHm_v2.0_Chr4g0407371 Rosa chinensis HOM05D003497 ORTHO05D003964 6.3e-27 125.6 296 32.8
CARHR164040 Cardamine hirsuta HOM05D003497 ORTHO05D003964 1.1e-26 124.8 232 38.8
RcHm_v2.0_Chr4g0407391 Rosa chinensis HOM05D003497 ORTHO05D003964 1.8e-26 124.0 297 31.3
BcaB06g27743 Brassica carinata HOM05D003497 ORTHO05D003964 2.4e-26 123.6 253 36.4
BcaC02g08840 Brassica carinata HOM05D003497 ORTHO05D003964 2.4e-26 123.6 206 38.8
RcHm_v2.0_Chr4g0407381 Rosa chinensis HOM05D003497 ORTHO05D003964 3.1e-26 123.2 206 35.4
PGR102G1148 Punica granatum HOM05D003497 ORTHO05D003964 6.9e-26 122.1 206 37.9
AagrBONN_evm.TU.Sc2ySwM_344.3993 Anthoceros agrestis HOM05D003497 ORTHO05D003964 1.5e-25 120.9 284 33.5
HanXRQChr10g0290301 Helianthus annuus HOM05D003497 ORTHO05D003964 5.9e-25 119.0 221 33.5
Mapoly0001s0353 Marchantia polymorpha HOM05D003497 ORTHO05D003964 5.9e-25 119.0 303 30.7
Pp3c15_1340 Physcomitrium patens HOM05D003497 ORTHO05D003964 5.9e-25 119.0 311 28.9
PGR102G1733 Punica granatum HOM05D003497 ORTHO05D003964 1.0e-24 118.2 261 35.6
HanXRQChr10g0290281 Helianthus annuus HOM05D003497 ORTHO05D003964 2.9e-24 116.7 202 35.1
FvH4_5g20811 Fragaria vesca HOM05D003497 ORTHO05D003964 3.8e-24 116.3 238 32.4
MD10G1110700 Malus domestica HOM05D003497 ORTHO05D003964 3.8e-24 116.3 184 41.3
Zm00001eb009480 Zea mays HOM05D003497 ORTHO05D003964 5.0e-24 115.9 280 32.1
BcaB03g11953 Brassica carinata HOM05D003497 ORTHO05D003964 6.5e-24 115.5 222 38.7
FAN04G2985 Fragaria x ananassa HOM05D003497 ORTHO05D003964 8.5e-24 115.2 236 31.4
MD10G1175800 Malus domestica HOM05D003497 ORTHO05D003964 1.9e-23 114.0 228 34.6
Sed0000294 Sechium edule HOM05D003497 ORTHO05D003964 2.5e-23 113.6 222 34.7
FAN18G2835 Fragaria x ananassa HOM05D003497 ORTHO05D003964 4.6e-22 109.4 239 31.8
Potri.015G020600 Populus trichocarpa HOM05D003497 ORTHO05D003964 4.6e-22 109.4 140 47.1
COL.COLO4_32483 Corchorus olitorius HOM05D003497 ORTHO05D003964 8.8e-21 105.1 210 35.7
Eucgr.I02498 Eucalyptus grandis HOM05D003497 ORTHO05D003964 1.3e-19 101.3 300 30.3
AL2G29670 Arabidopsis lyrata HOM05D003497 ORTHO05D003964 1.7e-19 100.9 197 34.5
SMO270G0122 Selaginella moellendorffii HOM05D003497 ORTHO05D003964 2.2e-19 100.5 194 36.1
Haze_10290 Corylus avellana HOM05D003497 ORTHO05D003964 6.3e-19 99.0 222 32.9
RcHm_v2.0_Chr4g0395411 Rosa chinensis HOM05D003497 ORTHO05D003964 6.3e-19 99.0 159 36.5
HanXRQChr10g0290271 Helianthus annuus HOM05D003497 ORTHO05D003964 1.5e-17 94.4 167 32.3
MD10G1110400 Malus domestica HOM05D003497 ORTHO05D003964 2.0e-17 94.0 86 50.0
AL5G35170 Arabidopsis lyrata HOM05D003497 ORTHO05D003964 4.5e-17 92.8 132 44.7
Sed0003270 Sechium edule HOM05D003497 ORTHO05D003964 4.5e-17 92.8 252 29.0
Haze_10296 Corylus avellana HOM05D003497 ORTHO05D003964 1.3e-16 91.3 88 51.1
AT1G70360 Arabidopsis thaliana HOM05D003497 ORTHO05D003964 2.9e-16 90.1 192 33.9
PGR119G2181 Punica granatum HOM05D003497 ORTHO05D003964 3.8e-16 89.7 203 37.9
Actinidia04396 Actinidia chinensis HOM05D003497 ORTHO05D003964 8.5e-16 88.6 256 31.6
BcaC02g08839 Brassica carinata HOM05D003497 ORTHO05D003964 8.5e-16 88.6 150 38.0
PSO170G1569 Papaver somniferum HOM05D003497 ORTHO05D003964 1.1e-15 88.2 83 54.2
PSO017G5705 Papaver somniferum HOM05D003497 ORTHO05D003964 1.9e-15 87.4 102 47.1
Migut.B00467 Erythranthe guttata HOM05D003497 ORTHO05D003964 7.4e-12 75.5 126 36.5
Potri.017G134500 Populus trichocarpa HOM05D003497 ORTHO05D003964 9.7e-12 75.1 117 41.9
Sed0009840 Sechium edule HOM05D003497 ORTHO05D003964 1.7e-11 74.3 174 30.5
Sed0016990 Sechium edule HOM05D003497 ORTHO05D003964 1.1e-10 71.6 244 25.8
C03p57300 Brassica napus HOM05D003497 ORTHO05D003964 1.4e-10 71.2 154 31.8
Actinidia02442 Actinidia chinensis HOM05D003497 ORTHO05D003964 1.8e-10 70.9 82 47.6
Os10g0130200 Oryza sativa ssp. japonica HOM05D019728 ORTHO05D023023 2.0e-09 67.4 264 26.5
CBR_g19394 Chara braunii HOM05D003497 ORTHO05D003964 2.6e-09 67.0 107 36.4
Cfa004698 Carpinus fangiana HOM05D003497 ORTHO05D003964 1.0e-08 65.1 80 45.0
Lsat_1_v5_gn_5_117240 Lactuca sativa HOM05D003497 ORTHO05D003964 1.9e-07 60.8 147 32.0
SEGI_41103 Sequoiadendron giganteum HOM05D003497 ORTHO05D003964 3.2e-07 60.1 172 29.1
MCO07G198 Micromonas commoda HOM05D003497 ORTHO05D003964 1.2e-06 58.2 178 29.8
arahy.Tifrunner.gnm1.ann1.HH0ZDZ Arachis hypogaea HOM05D003497 ORTHO05D003964 2.7e-06 57.0 36 66.7
arahy.Tifrunner.gnm1.ann1.D86B0Q Arachis hypogaea HOM05D003497 ORTHO05D003964 4.7e-06 56.2 83 41.0


User provided reference genes

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