Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G00801 Aquilegia oxysepala HOM05D006169 ORTHO05D007698 6.8e-156 553.9 271 100.0
PSO210G0761 Papaver somniferum HOM05D006169 ORTHO05D007698 2.2e-101 372.9 248 74.2
GSVIVG01031157001 Vitis vinifera HOM05D006169 ORTHO05D007698 2.8e-101 372.5 232 78.0
Lj5g0023338 Lotus japonicus HOM05D006169 ORTHO05D007698 3.7e-101 372.1 248 72.6
Peaxi162Scf00484g00066 Petunia axillaris HOM05D006169 ORTHO05D007698 3.7e-101 372.1 229 77.3
Manes.08G114800 Manihot esculenta HOM05D006169 ORTHO05D007698 8.2e-101 370.9 275 70.2
Medtr1g083600 Medicago truncatula HOM05D006169 ORTHO05D007698 1.8e-100 369.8 216 81.0
CAN.G813.8 Capsicum annuum HOM05D006169 ORTHO05D007698 3.1e-100 369.0 217 80.2
Eucgr.L02153 Eucalyptus grandis HOM05D006169 ORTHO05D007698 3.1e-100 369.0 213 80.8
CANSAT54G3053 Cannabis sativa HOM05D006169 ORTHO05D007698 4.1e-100 368.6 263 71.1
Glyma.10G150300 Glycine max HOM05D006169 ORTHO05D007698 6.9e-100 367.9 216 80.6
Nitab4.5_0001266g0050 Nicotiana tabacum HOM05D006169 ORTHO05D007698 6.9e-100 367.9 217 80.2
THA.LOC104802790 Tarenaya hassleriana HOM05D006169 ORTHO05D007698 2.0e-99 366.3 227 76.7
Eucgr.H03261 Eucalyptus grandis HOM05D006169 ORTHO05D007698 2.6e-99 365.9 218 78.9
Hma1.2p1_1441F.1_g283670 Hydrangea macrophylla HOM05D006169 ORTHO05D007698 5.9e-99 364.8 268 70.5
Ca_10150_v3 Cicer arietinum L. HOM05D006169 ORTHO05D007698 7.6e-99 364.4 263 68.8
Duzib177G0247 Durio zibethinus HOM05D006169 ORTHO05D007698 1.0e-98 364.0 269 70.3
Ciclev10001820m.g Citrus clementina HOM05D006169 ORTHO05D007698 1.3e-98 363.6 271 69.7
Cc02_g34500 Coffea canephora HOM05D006169 ORTHO05D007698 1.7e-98 363.2 247 74.1
PSO832G1922 Papaver somniferum HOM05D006169 ORTHO05D007698 1.7e-98 363.2 243 74.1
arahy.Tifrunner.gnm1.ann1.NVQ69B Arachis hypogaea HOM05D006169 ORTHO05D007698 3.8e-98 362.1 234 75.2
AUR62000726 Chenopodium quinoa HOM05D006169 ORTHO05D007698 3.8e-98 362.1 251 69.7
Rhsim05G0136600 Rhododendron simsii HOM05D006169 ORTHO05D007698 8.5e-98 360.9 214 80.8
Gorai.007G302700 Gossypium raimondii HOM05D006169 ORTHO05D007698 1.1e-97 360.5 274 68.6
Gohir.A11G270300 Gossypium hirsutum HOM05D006169 ORTHO05D007698 1.4e-97 360.1 274 68.6
MD04G1197600 Malus domestica HOM05D006169 ORTHO05D007698 1.4e-97 360.1 224 77.7
Potri.013G012400 Populus trichocarpa HOM05D006169 ORTHO05D007698 1.4e-97 360.1 273 68.5
Phvul.007G198500 Phaseolus vulgaris HOM05D006169 ORTHO05D007698 1.9e-97 359.8 274 68.2
FvH4_6g06920 Fragaria vesca HOM05D006169 ORTHO05D007698 2.5e-97 359.4 274 69.0
Gohir.D11G280500 Gossypium hirsutum HOM05D006169 ORTHO05D007698 3.2e-97 359.0 271 68.6
RcHm_v2.0_Chr3g0456451 Rosa chinensis HOM05D006169 ORTHO05D007698 3.2e-97 359.0 274 68.6
CsaV3_2G006780 Cucumis sativus L. HOM05D006169 ORTHO05D007698 5.5e-97 358.2 215 80.5
QL03p019145 Quercus lobata HOM05D006169 ORTHO05D007698 9.3e-97 357.5 214 79.9
SalBow3G0569 Salvia bowleyana HOM05D006169 ORTHO05D007698 1.2e-96 357.1 244 71.3
Thecc.05G316900 Theobroma cacao HOM05D006169 ORTHO05D007698 2.1e-96 356.3 269 69.9
Eucgr.H04522 Eucalyptus grandis HOM05D006169 ORTHO05D007698 3.6e-96 355.5 214 79.0
Migut.N02103 Erythranthe guttata HOM05D006169 ORTHO05D007698 1.4e-95 353.6 240 72.9
Thhalv10021364m.g Eutrema salsugineum HOM05D006169 ORTHO05D007698 2.3e-95 352.8 226 73.9
AT3G05625 Arabidopsis thaliana HOM05D006169 ORTHO05D007698 3.9e-95 352.1 212 77.4
PGR031G2380 Punica granatum HOM05D006169 ORTHO05D007698 3.9e-95 352.1 264 69.3
COL.COLO4_10563 Corchorus olitorius HOM05D006169 ORTHO05D007698 5.1e-95 351.7 261 68.6
Lsat_1_v5_gn_7_73300 Lactuca sativa HOM05D006169 ORTHO05D007698 5.1e-95 351.7 205 80.5
AL3G16270 Arabidopsis lyrata HOM05D006169 ORTHO05D007698 6.7e-95 351.3 226 74.8
A03p34240 Brassica napus HOM05D006169 ORTHO05D007698 8.8e-95 350.9 228 74.6
BraA03t12598Z Brassica rapa HOM05D006169 ORTHO05D007698 8.8e-95 350.9 228 74.6
MELO3C004212.2 Cucumis melo HOM05D006169 ORTHO05D007698 8.8e-95 350.9 274 68.2
ECA236G4200 Erigeron canadensis HOM05D006169 ORTHO05D007698 1.1e-94 350.5 225 74.7
HanXRQChr06g0182151 Helianthus annuus HOM05D006169 ORTHO05D007698 1.1e-94 350.5 208 78.8
Sed0028110 Sechium edule HOM05D006169 ORTHO05D007698 1.5e-94 350.1 273 65.9
Actinidia02688 Actinidia chinensis HOM05D006169 ORTHO05D007698 1.9e-94 349.7 213 80.8
BolC3t16445H Brassica oleracea HOM05D006169 ORTHO05D007698 1.9e-94 349.7 212 77.8
CARHR080070 Cardamine hirsuta HOM05D006169 ORTHO05D007698 1.9e-94 349.7 226 74.3
Lj9C200T3 Lonicera japonica HOM05D006169 ORTHO05D007698 2.5e-94 349.4 237 72.2
Sc14g0006600 Simmondsia chinensis HOM05D006169 ORTHO05D007698 2.5e-94 349.4 215 76.3
Sp3g04510 Schrenkiella parvula HOM05D006169 ORTHO05D007698 7.4e-94 347.8 226 74.3
TWI56G0200 Tripterygium wilfordii HOM05D006169 ORTHO05D007698 7.4e-94 347.8 270 66.3
DCAR_029375 Daucus carota HOM05D006169 ORTHO05D007698 9.7e-94 347.4 270 65.6
Aa31LG5G16050 Aethionema arabicum HOM05D006169 ORTHO05D007698 1.3e-93 347.1 235 72.3
Sopen10g013390 Solanum pennellii HOM05D006169 ORTHO05D007698 1.3e-93 347.1 217 76.0
Lalb_Chr06g0167751 Lupinus albus HOM05D006169 ORTHO05D007698 2.2e-93 346.3 216 75.9
BcaB04g19252 Brassica carinata HOM05D006169 ORTHO05D007698 2.8e-93 345.9 212 76.9
Solyc10g044710.2 Solanum lycopersicum HOM05D006169 ORTHO05D007698 2.8e-93 345.9 217 75.6
Carub.0003s0495 Capsella rubella HOM05D006169 ORTHO05D007698 4.8e-93 345.1 213 77.5
BcaB04g19251 Brassica carinata HOM05D006169 ORTHO05D007698 8.2e-93 344.4 228 72.8
Atru.chr5.1841 Acer truncatum HOM05D006169 ORTHO05D007698 4.1e-92 342.0 231 72.3
Ah.04g161300 Amaranthus hybridus HOM05D006169 ORTHO05D007698 6.9e-92 341.3 231 71.0
Sabra13G0011000 Salix brachista HOM05D006169 ORTHO05D007698 6.9e-92 341.3 306 60.5
SGA_v2.0_scaffold81G26108 Striga asiatica HOM05D006169 ORTHO05D007698 7.7e-91 337.8 218 74.8
C03p41640 Brassica napus HOM05D006169 ORTHO05D007698 4.7e-88 328.6 204 77.5
CDE05G1145 Ceratophyllum demersum HOM05D006169 ORTHO05D007698 7.9e-88 327.8 231 67.5
ATR0693G261 Amborella trichopoda HOM05D006169 ORTHO05D007698 1.8e-87 326.6 265 62.6
Haze_04109 Corylus avellana HOM05D006169 ORTHO05D007698 3.9e-87 325.5 284 63.0
HPP92_016954 Vanilla planifolia HOM05D006169 ORTHO05D007698 8.8e-87 324.3 213 72.3
Nn3g21567 Nelumbo nucifera HOM05D006169 ORTHO05D007698 4.4e-86 322.0 275 64.4
HPP92_016950 Vanilla planifolia HOM05D006169 ORTHO05D007698 2.8e-85 319.3 215 71.2
TPR.G17714 Trifolium pratense HOM05D006169 ORTHO05D007698 1.1e-84 317.4 180 81.1
unitig_0.g2320 Utricularia gibba HOM05D006169 ORTHO05D007698 2.4e-84 316.2 225 69.3
BcaB04g19253 Brassica carinata HOM05D006169 ORTHO05D007698 9.1e-84 314.3 227 67.8
MBI18_g25080_MAGBIO Magnolia biondii HOM05D006169 ORTHO05D007698 1.0e-82 310.8 245 67.3
Hma1.2p1_1441F.1_g283680 Hydrangea macrophylla HOM05D006169 ORTHO05D007698 5.0e-82 308.5 233 70.0
ClCG02G015230 Citrullus lanatus HOM05D006169 ORTHO05D007698 8.5e-82 307.8 272 61.4
Prupe.6G318000 Prunus persica HOM05D006169 ORTHO05D007698 2.5e-81 306.2 267 61.8
CiPaw.08G158800 Carya illinoinensis HOM05D006169 ORTHO05D007698 7.2e-81 304.7 242 64.5
EL10Ac4g09881 Beta vulgaris HOM05D006169 ORTHO05D007698 2.1e-80 303.1 203 72.4
FAN14G4015 Fragaria x ananassa HOM05D006169 ORTHO05D007698 4.7e-80 302.0 171 81.9
Cfa006660 Carpinus fangiana HOM05D006169 ORTHO05D007698 6.1e-80 301.6 252 65.5
AUR62005238 Chenopodium quinoa HOM05D006169 ORTHO05D007698 1.1e-78 297.4 169 79.3
SEGI_23594 Sequoiadendron giganteum HOM05D006169 ORTHO05D007698 1.5e-78 297.0 214 66.4
Hund07115 Selenicereus undatus HOM05D006169 ORTHO05D007698 3.3e-78 295.8 258 61.6
FAN09G1827 Fragaria x ananassa HOM05D006169 ORTHO05D007698 4.8e-77 292.0 277 60.3
Cpa.g.sc48.120 Carica papaya HOM05D006169 ORTHO05D007698 5.0e-74 282.0 320 52.8
Pp3c1_33190 Physcomitrium patens HOM05D006169 ORTHO05D007698 6.1e-72 275.0 192 67.2
CDE11G0042 Ceratophyllum demersum HOM05D006169 ORTHO05D007698 2.3e-71 273.1 226 59.7
ClCG00G004550 Citrullus lanatus HOM05D006169 ORTHO05D007698 4.0e-71 272.3 353 47.3
Dinv24403 Davidia involucrata HOM05D006169 ORTHO05D007698 1.5e-70 270.4 206 71.8
Zm00001eb340780 Zea mays HOM05D006169 ORTHO05D007698 5.7e-70 268.5 175 72.6
Psat6g151520 Pisum sativum HOM05D006169 ORTHO05D007698 6.3e-69 265.0 148 83.8
Oeu048884.1 Olea europaea HOM05D006169 ORTHO05D007698 1.1e-68 264.2 157 80.9
arahy.Tifrunner.gnm1.ann1.X8FEVW Arachis hypogaea HOM05D006169 ORTHO05D007698 4.1e-68 262.3 156 80.1
Mapoly0065s0090 Marchantia polymorpha HOM05D006169 ORTHO05D007698 3.2e-65 252.7 198 61.1
Actinidia19770 Actinidia chinensis HOM05D006169 ORTHO05D007698 1.7e-61 240.4 169 72.2
Cre12.g508350 Chlamydomonas reinhardtii HOM05D006169 ORTHO05D007698 2.5e-57 226.5 181 58.0
CBR_g8203 Chara braunii HOM05D006169 ORTHO05D007698 3.3e-57 226.1 206 52.9
FAN05G4461 Fragaria x ananassa HOM05D006169 ORTHO05D007698 1.8e-55 220.3 184 66.3
Nitab4.5_0000005g0540 Nicotiana tabacum HOM05D006169 ORTHO05D007698 4.0e-55 219.2 141 76.6
VMungo0720G2022 Vigna mungo HOM05D006169 ORTHO05D007698 6.8e-55 218.4 244 54.9
AagrBONN_evm.TU.Sc2ySwM_344.2014 Anthoceros agrestis HOM05D006169 ORTHO05D007698 2.2e-53 213.4 162 63.6
SMO358G0244 Selaginella moellendorffii HOM05D006169 ORTHO05D007698 4.1e-52 209.1 179 53.6
Glyma.20G237950 Glycine max HOM05D006169 ORTHO05D007698 1.6e-48 197.2 117 80.3
TAR365G0132 Trochodendron aralioides HOM05D002548 ORTHO05D003031 8.0e-48 194.9 271 43.9
MCO01G635 Micromonas commoda HOM05D006169 ORTHO05D007698 5.6e-41 172.2 182 48.9
arahy.Tifrunner.gnm1.ann1.91HID7 Arachis hypogaea HOM05D006169 ORTHO05D007698 3.4e-38 162.9 81 91.4
arahy.Tifrunner.gnm1.ann1.Z5NCG3 Arachis hypogaea HOM05D006169 ORTHO05D007698 4.9e-37 159.1 81 90.1
arahy.Tifrunner.gnm1.ann1.W0CMT4 Arachis hypogaea HOM05D006169 ORTHO05D007698 2.3e-34 150.2 76 90.8
PGSC0003DMG400043741 Solanum tuberosum HOM05D006169 ORTHO05D007698 1.1e-31 141.4 117 60.7
RcHm_v2.0_Chr1g0332671 Rosa chinensis HOM05D006169 ORTHO05D007698 4.9e-29 132.5 69 87.0
PRCOL_00000586 Prasinoderma coloniale HOM05D006169 ORTHO05D007698 7.1e-28 128.6 180 41.7
SMO117G0309 Selaginella moellendorffii HOM05D006169 ORTHO05D007698 3.3e-25 119.8 118 41.5
arahy.Tifrunner.gnm1.ann1.CWA5R2 Arachis hypogaea HOM05D006169 ORTHO05D007698 4.7e-24 115.9 58 91.4
CSS0014495 Camellia sinensis var. sinensis HOM05D006169 ORTHO05D007698 4.7e-24 115.9 124 57.3
Sabra13G0011100 Salix brachista HOM05D006169 ORTHO05D007698 2.6e-22 110.2 170 45.3
MSTRG.5122 Avicennia marina HOM05D006169 ORTHO05D007698 7.1e-20 102.1 68 69.1
CSS0040457 Camellia sinensis var. sinensis HOM05D006169 ORTHO05D007698 5.6e-17 92.4 51 82.4
arahy.Tifrunner.gnm1.ann1.C5NY6B Arachis hypogaea HOM05D006169 ORTHO05D007698 6.2e-16 89.0 64 67.2
arahy.Tifrunner.gnm1.ann1.4I5A07 Arachis hypogaea HOM05D000158 ORTHO05D003614 1.4e-15 87.8 45 86.7
Os01g0343500 Oryza sativa ssp. japonica HOM05D006169 ORTHO05D007698 3.4e-14 83.2 68 55.9
arahy.Tifrunner.gnm1.ann1.GNZ56J Arachis hypogaea HOM05D006169 ORTHO05D007698 1.3e-13 81.3 44 81.8


User provided reference genes

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