Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G00753 Aquilegia oxysepala HOM05D002674 ORTHO05D008041 8.2e-55 216.9 113 100.0
TAR636G2182 Trochodendron aralioides HOM05D002674 ORTHO05D008041 3.2e-35 151.8 105 73.3
Nn3g21482 Nelumbo nucifera HOM05D002674 ORTHO05D008041 1.2e-34 149.8 105 75.2
Gohir.D08G085400 Gossypium hirsutum HOM05D002674 ORTHO05D008041 2.1e-34 149.1 100 76.0
Sabra02G0154500 Salix brachista HOM05D002674 ORTHO05D008041 2.1e-34 149.1 103 74.8
Gohir.A08G076000 Gossypium hirsutum HOM05D002674 ORTHO05D008041 2.8e-34 148.7 100 75.0
Potri.014G129800 Populus trichocarpa HOM05D002674 ORTHO05D008041 3.6e-34 148.3 103 75.7
CANSAT25G0502 Cannabis sativa HOM05D002674 ORTHO05D008041 8.0e-34 147.1 100 74.0
Cc01_g20820 Coffea canephora HOM05D002674 ORTHO05D008041 1.4e-33 146.4 110 70.9
Duzib133G1209 Durio zibethinus HOM05D002674 ORTHO05D007700 3.0e-33 145.2 100 74.0
CDE12G0521 Ceratophyllum demersum HOM05D002674 ORTHO05D008041 4.0e-33 144.8 99 72.7
ClCG10G010910 Citrullus lanatus HOM05D002674 ORTHO05D008041 4.0e-33 144.8 102 73.5
HanXRQChr15g0465661 Helianthus annuus HOM05D002674 ORTHO05D008041 4.0e-33 144.8 104 74.0
TWI14G1447 Tripterygium wilfordii HOM05D002674 ORTHO05D008041 4.0e-33 144.8 102 74.5
QL12p028510 Quercus lobata HOM05D002674 ORTHO05D008041 8.8e-33 143.7 98 75.5
GSVIVG01028011001 Vitis vinifera HOM05D002674 ORTHO05D008041 8.8e-33 143.7 100 74.0
Dinv19696 Davidia involucrata HOM05D002674 ORTHO05D008041 1.2e-32 143.3 104 71.2
FvH4_2g25692 Fragaria vesca HOM05D002674 ORTHO05D008041 1.2e-32 143.3 101 73.3
Lalb_Chr21g0306851 Lupinus albus HOM05D002674 ORTHO05D008041 1.5e-32 142.9 103 73.8
MBI19_g25355_MAGBIO Magnolia biondii HOM05D002674 ORTHO05D008041 2.6e-32 142.1 103 68.0
Prupe.8G261100 Prunus persica HOM05D002674 ORTHO05D008041 2.6e-32 142.1 101 74.3
MELO3C017957.2 Cucumis melo HOM05D002674 ORTHO05D008041 3.4e-32 141.7 102 71.6
ECA247G1692 Erigeron canadensis HOM05D002674 ORTHO05D008041 3.4e-32 141.7 108 70.4
Glyma.10G018500 Glycine max HOM05D002674 ORTHO05D008041 3.4e-32 141.7 101 72.3
Actinidia32214 Actinidia chinensis HOM05D002674 ORTHO05D008041 4.4e-32 141.4 106 70.8
CAN.G472.1 Capsicum annuum HOM05D002674 ORTHO05D008041 4.4e-32 141.4 106 67.0
Solyc09g075100.3 Solanum lycopersicum HOM05D002674 ORTHO05D008041 4.4e-32 141.4 106 67.9
Sopen09g029920 Solanum pennellii HOM05D002674 ORTHO05D008041 4.4e-32 141.4 106 67.9
MSTRG.21632 Avicennia marina HOM05D002674 ORTHO05D008041 5.7e-32 141.0 104 71.2
Thecc.01G300000 Theobroma cacao HOM05D002674 ORTHO05D008041 5.7e-32 141.0 100 73.0
CsaV3_4G000790 Cucumis sativus L. HOM05D002674 ORTHO05D008041 7.5e-32 140.6 102 69.6
Oeu048338.1 Olea europaea HOM05D002674 ORTHO05D008041 7.5e-32 140.6 102 71.6
Peaxi162Scf00001g00445 Petunia axillaris HOM05D002674 ORTHO05D008041 7.5e-32 140.6 106 67.0
Dinv33053 Davidia involucrata HOM05D002674 ORTHO05D007700 9.8e-32 140.2 108 67.6
unitig_61.g26303 Utricularia gibba HOM05D002674 ORTHO05D008041 9.8e-32 140.2 101 69.3
CSS0018179 Camellia sinensis var. sinensis HOM05D002674 ORTHO05D008041 1.3e-31 139.8 109 67.0
PGSC0003DMG400011376 Solanum tuberosum HOM05D002674 ORTHO05D008041 1.3e-31 139.8 104 68.3
Hund18156 Selenicereus undatus HOM05D002674 ORTHO05D008041 1.7e-31 139.4 105 68.6
Nitab4.5_0001879g0010 Nicotiana tabacum HOM05D002674 ORTHO05D008041 2.2e-31 139.0 106 67.0
Nitab4.5_0008207g0030 Nicotiana tabacum HOM05D002674 ORTHO05D008041 2.2e-31 139.0 106 67.0
SalBow3G0298 Salvia bowleyana HOM05D002674 ORTHO05D008041 2.8e-31 138.7 96 72.9
FvH4_3g17380 Fragaria vesca HOM05D002674 ORTHO05D008041 4.9e-31 137.9 102 70.6
FAN11G2206 Fragaria x ananassa HOM05D002674 ORTHO05D008041 4.9e-31 137.9 102 70.6
Phvul.007G146200 Phaseolus vulgaris HOM05D002674 ORTHO05D008041 4.9e-31 137.9 103 70.9
Sed0019690 Sechium edule HOM05D002674 ORTHO05D008041 4.9e-31 137.9 102 69.6
VMungo0720G1979 Vigna mungo HOM05D002674 ORTHO05D008041 4.9e-31 137.9 103 71.8
CiPaw.07G108500 Carya illinoinensis HOM05D002674 ORTHO05D008041 6.3e-31 137.5 98 70.4
FAN21G2416 Fragaria x ananassa HOM05D002674 ORTHO05D008041 6.3e-31 137.5 102 70.6
ATR0796G030 Amborella trichopoda HOM05D002674 ORTHO05D008041 8.3e-31 137.1 106 66.0
AUR62008625 Chenopodium quinoa HOM05D002674 ORTHO05D008041 1.1e-30 136.7 101 67.3
COL.COLO4_23349 Corchorus olitorius HOM05D002674 ORTHO05D008041 1.1e-30 136.7 100 71.0
SGA_v2.0_scaffold2G01395 Striga asiatica HOM05D002674 ORTHO05D008041 1.1e-30 136.7 101 68.3
Atru.chr5.1150 Acer truncatum HOM05D002674 ORTHO05D008041 1.4e-30 136.3 102 68.6
Ciclev10022953m.g Citrus clementina HOM05D002674 ORTHO05D008041 1.4e-30 136.3 102 67.6
FAN16G1943 Fragaria x ananassa HOM05D002674 ORTHO05D008041 1.4e-30 136.3 102 69.6
arahy.Tifrunner.gnm1.ann1.9NAT9F Arachis hypogaea HOM05D002674 ORTHO05D008041 1.8e-30 136.0 103 68.9
arahy.Tifrunner.gnm1.ann1.UV7MYU Arachis hypogaea HOM05D002674 ORTHO05D008041 1.8e-30 136.0 103 68.9
Ca_10338_v3 Cicer arietinum L. HOM05D002674 ORTHO05D008041 1.8e-30 136.0 103 70.9
FAN25G1445 Fragaria x ananassa HOM05D002674 ORTHO05D008041 2.4e-30 135.6 99 70.7
Manes.01G218700 Manihot esculenta HOM05D002674 ORTHO05D008041 3.1e-30 135.2 101 70.3
PSO210G6076 Papaver somniferum HOM05D002674 ORTHO05D008041 3.1e-30 135.2 105 64.8
Haze_04934 Corylus avellana HOM05D002674 ORTHO05D008041 4.1e-30 134.8 97 70.1
Atru.chr7.1564 Acer truncatum HOM05D002674 ORTHO05D008041 5.4e-30 134.4 100 68.0
AUR62033146 Chenopodium quinoa HOM05D002674 ORTHO05D008041 5.4e-30 134.4 101 66.3
MD11G1310400 Malus domestica HOM05D002674 ORTHO05D008041 5.4e-30 134.4 97 71.1
RcHm_v2.0_Chr6g0293971 Rosa chinensis HOM05D002674 ORTHO05D008041 5.4e-30 134.4 101 70.3
PSO832G1306 Papaver somniferum HOM05D002674 ORTHO05D008041 7.0e-30 134.0 105 64.8
Psat6g166360 Pisum sativum HOM05D002674 ORTHO05D008041 7.0e-30 134.0 106 68.9
PGR119G0614 Punica granatum HOM05D002674 ORTHO05D008041 7.0e-30 134.0 97 70.1
EL10Ac7g17468 Beta vulgaris HOM05D002674 ORTHO05D008041 9.2e-30 133.7 101 67.3
Cpa.g.sc9.264 Carica papaya HOM05D002674 ORTHO05D008041 9.2e-30 133.7 101 67.3
TWI23G1311 Tripterygium wilfordii HOM05D002674 ORTHO05D008041 1.2e-29 133.3 100 70.0
Cfa005915 Carpinus fangiana HOM05D002674 ORTHO05D008041 4.5e-29 131.3 97 68.0
Eucgr.H01115 Eucalyptus grandis HOM05D002674 ORTHO05D008041 5.9e-29 131.0 97 66.0
BcaC02g10314 Brassica carinata HOM05D002674 ORTHO05D008041 7.8e-29 130.6 101 67.3
A04p00510 Brassica napus HOM05D002674 ORTHO05D008041 7.8e-29 130.6 101 67.3
BolC4t24576H Brassica oleracea HOM05D002674 ORTHO05D008041 7.8e-29 130.6 101 67.3
BraA04t15771Z Brassica rapa HOM05D002674 ORTHO05D008041 7.8e-29 130.6 101 67.3
AL5G45590 Arabidopsis lyrata HOM05D002674 ORTHO05D008041 1.0e-28 130.2 101 68.3
Migut.D00216 Erythranthe guttata HOM05D002674 ORTHO05D008041 1.0e-28 130.2 100 65.0
Carub.0005s2947 Capsella rubella HOM05D002674 ORTHO05D008041 1.3e-28 129.8 99 68.7
Rhsim13G0010400 Rhododendron simsii HOM05D002674 ORTHO05D008041 1.3e-28 129.8 125 60.8
Aa31LG10G16570 Aethionema arabicum HOM05D002674 ORTHO05D008041 2.3e-28 129.0 101 65.3
Sp5g00710 Schrenkiella parvula HOM05D002674 ORTHO05D008041 2.3e-28 129.0 101 66.3
AT3G62810 Arabidopsis thaliana HOM05D002674 ORTHO05D008041 3.8e-28 128.3 101 66.3
Lj5g0008305 Lotus japonicus HOM05D002674 ORTHO05D008041 5.0e-28 127.9 103 65.0
C04p30420 Brassica napus HOM05D002674 ORTHO05D008041 1.5e-27 126.3 101 65.3
BcaB02g08097 Brassica carinata HOM05D002674 ORTHO05D008041 1.9e-27 125.9 101 66.3
TPR.G34008 Trifolium pratense HOM05D002674 ORTHO05D008041 1.9e-27 125.9 103 67.0
MD03G1287900 Malus domestica HOM05D002674 ORTHO05D008041 4.3e-27 124.8 98 66.3
BcaC07g42733 Brassica carinata HOM05D002674 ORTHO05D008041 5.6e-27 124.4 97 67.0
Thhalv10006327m.g Eutrema salsugineum HOM05D002674 ORTHO05D008041 1.2e-26 123.2 97 66.0
Lalb_Chr02g0143261 Lupinus albus HOM05D000266 ORTHO05D008041 2.3e-25 119.0 97 67.0
PGR044G1069 Punica granatum HOM05D002674 ORTHO05D008041 5.2e-25 117.9 97 60.8
BraA09t40877Z Brassica rapa HOM05D002674 ORTHO05D008041 6.8e-25 117.5 97 66.0
Os05g0363600 Oryza sativa ssp. japonica HOM05D002674 ORTHO05D008041 8.9e-25 117.1 106 57.5
Medtr1g088550 Medicago truncatula HOM05D002674 ORTHO05D008041 1.2e-24 116.7 103 61.2
CARHR173080 Cardamine hirsuta HOM05D002674 ORTHO05D008041 2.6e-24 115.5 97 61.9
Sabra14G0096400 Salix brachista HOM05D002674 ORTHO05D008041 7.5e-24 114.0 99 60.6
A09p54660 Brassica napus HOM05D002674 ORTHO05D008041 1.3e-23 113.2 97 63.9
Zm00001eb346590 Zea mays HOM05D002674 ORTHO05D008041 1.7e-23 112.8 102 57.8
Gorai.004G089900 Gossypium raimondii HOM05D002674 ORTHO05D008041 2.2e-23 112.5 76 76.3
vmacro02452 Vaccinium macrocarpon HOM05D002674 ORTHO05D008041 2.2e-23 112.5 162 47.5
CDE01G0164 Ceratophyllum demersum HOM05D002674 ORTHO05D008041 2.4e-22 109.0 79 70.9
Lsat_1_v5_gn_9_5640 Lactuca sativa HOM05D002674 ORTHO05D008643 3.2e-22 108.6 82 72.0
SEGI_38702 Sequoiadendron giganteum HOM05D002674 ORTHO05D008041 9.2e-22 107.1 102 54.9
Duzib138G1033 Durio zibethinus HOM05D002674 ORTHO05D008041 1.2e-21 106.7 78 69.2
SalBow3G1515 Salvia bowleyana HOM05D002674 ORTHO05D008041 1.6e-21 106.3 85 63.5
SalBow5G2922 Salvia bowleyana HOM05D002674 ORTHO05D008041 4.6e-21 104.8 83 67.5
Haze_04957 Corylus avellana HOM05D002674 ORTHO05D008041 3.0e-20 102.1 76 69.7
Sc24g0003780 Simmondsia chinensis HOM05D002674 ORTHO05D008041 5.0e-20 101.3 77 66.2
Oeu010670.1 Olea europaea HOM05D002674 ORTHO05D008041 1.1e-19 100.1 102 55.9
HPP92_013721 Vanilla planifolia HOM05D002674 ORTHO05D008041 1.1e-19 100.1 174 37.4
Glyma.02G018200 Glycine max HOM05D002674 ORTHO05D008041 3.3e-19 98.6 75 66.7
Hma1.2p1_0491F.1_g164520 Hydrangea macrophylla HOM05D002674 ORTHO05D008041 1.1e-17 93.6 74 62.2
DCAR_002831 Daucus carota HOM05D000067 ORTHO05D001807 1.2e-16 90.1 78 64.1
C08p37560 Brassica napus HOM05D002674 ORTHO05D008041 2.6e-16 89.0 74 62.2
Ah.15g093210 Amaranthus hybridus HOM05D002674 ORTHO05D008041 7.5e-16 87.4 76 57.9
Mapoly0061s0038 Marchantia polymorpha HOM05D002674 ORTHO05D008041 1.9e-14 82.8 107 42.1
Pp3c9_7930 Physcomitrium patens HOM05D002674 ORTHO05D008041 6.0e-13 77.8 99 45.5
AagrBONN_evm.TU.Sc2ySwM_362.373 Anthoceros agrestis HOM05D002674 ORTHO05D008041 2.3e-12 75.9 103 43.7
BcaC07g40760 Brassica carinata HOM05D002674 ORTHO05D008041 3.6e-10 68.6 52 59.6
BolC8t51336H Brassica oleracea HOM05D002674 ORTHO05D008041 3.6e-10 68.6 52 59.6
RcHm_v2.0_Chr2g0146991 Rosa chinensis HOM05D002674 ORTHO05D008041 1.8e-09 66.2 54 63.0
PSO832G3862 Papaver somniferum HOM05D001297 ORTHO05D001135 6.4e-07 57.8 77 48.1
Cre07.g332150 Chlamydomonas reinhardtii HOM05D002674 ORTHO05D008041 1.4e-06 56.6 81 35.8
Peaxi162Scf00545g00027 Petunia axillaris HOM05D002674 ORTHO05D008041 5.4e-06 54.7 50 50.0


User provided reference genes

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