Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G00730 Aquilegia oxysepala HOM05D006406 ORTHO05D007883 1.5e-192 676.0 347 100.0
TAR633G0157 Trochodendron aralioides HOM05D006406 ORTHO05D007883 1.5e-136 490.0 357 70.0
Hma1.2p1_1212F.1_g267260 Hydrangea macrophylla HOM05D006406 ORTHO05D007883 1.4e-126 456.8 346 67.6
GSVIVG01031144001 Vitis vinifera HOM05D006406 ORTHO05D007883 7.2e-126 454.5 347 66.0
Nn4g25830 Nelumbo nucifera HOM05D006406 ORTHO05D007883 6.1e-125 451.4 360 64.2
Nitab4.5_0003658g0090 Nicotiana tabacum HOM05D006406 ORTHO05D007883 6.1e-125 451.4 321 67.9
MBI18_g46420_MAGBIO Magnolia biondii HOM05D006406 ORTHO05D007883 2.0e-123 446.4 317 68.1
Thecc.05G312900 Theobroma cacao HOM05D006406 ORTHO05D007883 4.4e-123 445.3 347 64.3
QL03p020986 Quercus lobata HOM05D006406 ORTHO05D007883 6.3e-122 441.4 314 69.4
Sabra13G0015900 Salix brachista HOM05D006406 ORTHO05D007883 6.3e-122 441.4 349 65.3
Atru.chr2.29 Acer truncatum HOM05D006406 ORTHO05D007883 1.1e-121 440.7 319 68.3
COL.COLO4_10518 Corchorus olitorius HOM05D006406 ORTHO05D007883 1.1e-121 440.7 356 62.9
Duzib177G0190 Durio zibethinus HOM05D006406 ORTHO05D007883 1.1e-121 440.7 348 63.8
QL03p021882 Quercus lobata HOM05D006406 ORTHO05D007883 1.1e-121 440.7 314 69.1
Manes.08G117600 Manihot esculenta HOM05D006406 ORTHO05D007883 1.4e-121 440.3 347 63.7
Sabra13G0020100 Salix brachista HOM05D006406 ORTHO05D007883 2.4e-121 439.5 353 64.3
Lj9C146T2 Lonicera japonica HOM05D006406 ORTHO05D007883 3.1e-121 439.1 311 67.2
Nitab4.5_0003844g0020 Nicotiana tabacum HOM05D006406 ORTHO05D007883 5.3e-121 438.3 309 68.6
Rhsim07G0188300 Rhododendron simsii HOM05D006406 ORTHO05D007883 7.0e-121 438.0 307 68.7
Potri.013G017100 Populus trichocarpa HOM05D006406 ORTHO05D007883 9.1e-121 437.6 331 66.8
CiPaw.08G161900 Carya illinoinensis HOM05D006406 ORTHO05D007883 5.9e-120 434.9 351 63.0
Haze_04140 Corylus avellana HOM05D006406 ORTHO05D007883 5.9e-120 434.9 319 67.4
Cfa006628 Carpinus fangiana HOM05D006406 ORTHO05D007883 7.7e-120 434.5 302 69.9
CAN.G1459.10 Capsicum annuum HOM05D006406 ORTHO05D007883 1.3e-119 433.7 316 67.1
vmacro04816 Vaccinium macrocarpon HOM05D006406 ORTHO05D007883 2.2e-119 433.0 324 66.0
Cpa.g.sc48.95 Carica papaya HOM05D006406 ORTHO05D007883 3.8e-119 432.2 308 66.6
Solyc01g099700.3 Solanum lycopersicum HOM05D006406 ORTHO05D007883 5.0e-119 431.8 321 65.4
PGSC0003DMG400007542 Solanum tuberosum HOM05D006406 ORTHO05D007883 8.5e-119 431.0 309 68.0
Sc16g0008820 Simmondsia chinensis HOM05D006406 ORTHO05D007883 1.1e-118 430.6 353 61.2
Peaxi162Scf00037g01125 Petunia axillaris HOM05D006406 ORTHO05D007883 1.5e-118 430.3 326 65.6
Hund07096 Selenicereus undatus HOM05D006406 ORTHO05D007883 1.9e-118 429.9 322 65.8
Sopen01g043220 Solanum pennellii HOM05D006406 ORTHO05D007883 3.2e-118 429.1 321 65.1
Lalb_Chr18g0045761 Lupinus albus HOM05D006406 ORTHO05D007883 1.2e-117 427.2 316 65.8
PGR083G2713 Punica granatum HOM05D006406 ORTHO05D007883 2.7e-117 426.0 304 67.1
Glyma.03G235700 Glycine max HOM05D006406 ORTHO05D007883 3.6e-117 425.6 316 65.8
Gorai.013G125700 Gossypium raimondii HOM05D006406 ORTHO05D007883 4.7e-117 425.2 328 63.7
EL10Ac4g09916 Beta vulgaris HOM05D006406 ORTHO05D007883 1.0e-116 424.1 314 65.6
Gohir.D13G112000 Gossypium hirsutum HOM05D006406 ORTHO05D007883 1.0e-116 424.1 321 64.5
Actinidia35561 Actinidia chinensis HOM05D006406 ORTHO05D007883 1.4e-116 423.7 313 65.5
Gohir.A13G109200 Gossypium hirsutum HOM05D006406 ORTHO05D007883 1.8e-116 423.3 328 63.4
Oeu043348.1 Olea europaea HOM05D006406 ORTHO05D007883 1.8e-116 423.3 323 66.3
Ciclev10001711m.g Citrus clementina HOM05D006406 ORTHO05D007883 2.3e-116 422.9 347 60.5
Medtr7g112650 Medicago truncatula HOM05D006406 ORTHO05D007883 1.5e-115 420.2 319 63.3
CsaV3_1G038840 Cucumis sativus L. HOM05D006406 ORTHO05D007883 3.4e-115 419.1 304 65.8
VMungo0540G0116 Vigna mungo HOM05D006406 ORTHO05D007883 4.4e-115 418.7 330 63.0
Carub.0006s2486 Capsella rubella HOM05D006406 ORTHO05D007883 1.7e-114 416.8 319 63.3
RcHm_v2.0_Chr3g0455711 Rosa chinensis HOM05D006406 ORTHO05D007883 2.2e-114 416.4 351 62.1
TWI12G0288 Tripterygium wilfordii HOM05D006406 ORTHO05D007883 2.8e-114 416.0 351 60.7
MD04G1200800 Malus domestica HOM05D006406 ORTHO05D007883 3.7e-114 415.6 311 66.2
TPR.G33225 Trifolium pratense HOM05D006406 ORTHO05D007883 3.7e-114 415.6 321 63.9
PSO210G1688 Papaver somniferum HOM05D006406 ORTHO05D007883 1.1e-113 414.1 349 61.9
ClCG03G017120 Citrullus lanatus HOM05D006406 ORTHO05D007883 2.4e-113 412.9 349 59.3
PSO210G1514 Papaver somniferum HOM05D006406 ORTHO05D007883 2.4e-113 412.9 348 61.5
CANSAT54G1062 Cannabis sativa HOM05D006406 ORTHO05D007883 2.7e-112 409.5 309 64.7
Ca_05800_v3 Cicer arietinum L. HOM05D006406 ORTHO05D007883 2.7e-112 409.5 326 62.0
Eucgr.B01914 Eucalyptus grandis HOM05D006406 ORTHO05D007883 2.7e-112 409.5 367 59.1
Sp2g20880 Schrenkiella parvula HOM05D006406 ORTHO05D007883 2.7e-112 409.5 316 62.0
arahy.Tifrunner.gnm1.ann1.Q6XDLT Arachis hypogaea HOM05D006406 ORTHO05D007883 4.5e-112 408.7 347 58.2
Aa31LG11G9460 Aethionema arabicum HOM05D006406 ORTHO05D007883 1.0e-111 407.5 320 62.2
Phvul.006G089700 Phaseolus vulgaris HOM05D006406 ORTHO05D007883 1.0e-111 407.5 314 63.4
SalBow7G2778 Salvia bowleyana HOM05D006406 ORTHO05D007883 1.0e-111 407.5 302 64.9
AL6G39250 Arabidopsis lyrata HOM05D006406 ORTHO05D007883 1.9e-110 403.3 324 60.8
arahy.Tifrunner.gnm1.ann1.PP7FUY Arachis hypogaea HOM05D006406 ORTHO05D007883 1.9e-110 403.3 347 57.3
Hund07097 Selenicereus undatus HOM05D006406 ORTHO05D007883 3.2e-110 402.5 300 64.0
SGA_v2.0_scaffold172G38986 Striga asiatica HOM05D006406 ORTHO05D007883 3.2e-110 402.5 312 65.4
Thhalv10005730m.g Eutrema salsugineum HOM05D006406 ORTHO05D007883 4.2e-110 402.1 324 61.7
Lj1g0022852 Lotus japonicus HOM05D006406 ORTHO05D007883 4.2e-110 402.1 316 61.4
CDE11G0411 Ceratophyllum demersum HOM05D001335 ORTHO05D001184 9.4e-110 401.0 304 62.2
TWI36G0652 Tripterygium wilfordii HOM05D006406 ORTHO05D007883 9.4e-110 401.0 303 63.0
Sed0006495 Sechium edule HOM05D006406 ORTHO05D007883 1.6e-109 400.2 352 57.1
Psat0s27g0120 Pisum sativum HOM05D006406 ORTHO05D007883 2.1e-109 399.8 319 62.4
AT5G27710 Arabidopsis thaliana HOM05D006406 ORTHO05D007883 8.0e-109 397.9 319 62.4
THA.LOC104818716 Tarenaya hassleriana HOM05D006406 ORTHO05D007883 1.8e-108 396.7 350 59.4
unitig_52.g17112 Utricularia gibba HOM05D006406 ORTHO05D007883 2.3e-108 396.4 318 62.6
Prupe.6G320900 Prunus persica HOM05D006406 ORTHO05D007883 1.2e-107 394.0 280 69.3
FAN14G3705 Fragaria x ananassa HOM05D006406 ORTHO05D007883 7.5e-107 391.3 291 65.6
Migut.N01744 Erythranthe guttata HOM05D006406 ORTHO05D007883 6.3e-106 388.3 313 63.3
CSS0003718 Camellia sinensis var. sinensis HOM05D006406 ORTHO05D007883 1.4e-105 387.1 302 63.2
HanXRQChr11g0339311 Helianthus annuus HOM05D006406 ORTHO05D007883 3.1e-105 386.0 295 65.4
AUR62000764 Chenopodium quinoa HOM05D006406 ORTHO05D007883 5.4e-105 385.2 303 61.7
ECA236G2290 Erigeron canadensis HOM05D006406 ORTHO05D007883 1.6e-104 383.6 293 64.2
A09p05410 Brassica napus HOM05D006406 ORTHO05D007883 1.0e-103 380.9 323 60.7
Lsat_1_v5_gn_9_88181 Lactuca sativa HOM05D006406 ORTHO05D007883 2.3e-103 379.8 309 62.1
Dinv30810 Davidia involucrata HOM05D006406 ORTHO05D007883 2.9e-103 379.4 256 72.3
BraA09t36179Z Brassica rapa HOM05D006406 ORTHO05D007883 6.6e-103 378.3 323 60.1
CARHR186230 Cardamine hirsuta HOM05D006406 ORTHO05D007883 2.5e-102 376.3 293 63.5
Cc02_g34120 Coffea canephora HOM05D006406 ORTHO05D007883 1.2e-101 374.0 215 80.9
Os07g0673000 Oryza sativa ssp. japonica HOM05D006406 ORTHO05D007883 2.1e-101 373.2 273 63.4
FAN05G5419 Fragaria x ananassa HOM05D006406 ORTHO05D007883 3.6e-101 372.5 286 64.3
ATR0796G153 Amborella trichopoda HOM05D006406 ORTHO05D007883 2.3e-100 369.8 229 72.9
BcaC04g23642 Brassica carinata HOM05D006406 ORTHO05D007883 1.2e-99 367.5 324 58.6
Ah.06g189770 Amaranthus hybridus HOM05D006406 ORTHO05D007883 5.7e-99 365.2 273 65.6
C09p05890 Brassica napus HOM05D006406 ORTHO05D007883 4.9e-98 362.1 325 58.8
BolC9t53515H Brassica oleracea HOM05D006406 ORTHO05D007883 4.9e-98 362.1 325 58.8
BcaB04g19684 Brassica carinata HOM05D006406 ORTHO05D007883 3.2e-97 359.4 319 58.3
AUR62005205 Chenopodium quinoa HOM05D006406 ORTHO05D007883 1.7e-95 353.6 324 55.9
DCAR_029393 Daucus carota HOM05D006406 ORTHO05D007883 1.4e-89 334.0 317 54.3
Glyma.19G233500 Glycine max HOM05D006406 ORTHO05D007883 5.0e-87 325.5 253 63.2
SEGI_05797 Sequoiadendron giganteum HOM05D006406 ORTHO05D007883 1.9e-86 323.6 306 51.6
MELO3C015308.2 Cucumis melo HOM05D006406 ORTHO05D007883 8.3e-74 281.6 359 44.6
Pp3c6_26830 Physcomitrium patens HOM05D006406 ORTHO05D007883 1.6e-72 277.3 331 42.0
FvH4_6g06560 Fragaria vesca HOM05D006406 ORTHO05D007883 4.6e-72 275.8 227 60.4
Zm00001eb111280 Zea mays HOM05D006406 ORTHO05D007883 2.1e-69 266.9 217 58.5
SMO172G0153 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 6.2e-69 265.4 294 46.6
PGSC0003DMG400024710 Solanum tuberosum HOM05D006406 ORTHO05D007883 8.9e-68 261.5 207 63.8
Hma1.2p1_1212F.1_g267270 Hydrangea macrophylla HOM05D006406 ORTHO05D007883 1.7e-66 257.3 232 60.8
SMO172G0232 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 3.8e-66 256.1 289 45.7
HPP92_011843 Vanilla planifolia HOM05D006406 ORTHO05D007883 1.7e-63 247.3 299 45.5
Mapoly0054s0047 Marchantia polymorpha HOM05D006406 ORTHO05D007883 3.0e-63 246.5 307 41.7
Oeu043349.1 Olea europaea HOM05D006406 ORTHO05D007883 4.8e-61 239.2 209 60.3
CBR_g19246 Chara braunii HOM05D006406 ORTHO05D007883 2.4e-57 226.9 245 43.3
PSO421G0497 Papaver somniferum HOM05D006406 ORTHO05D007883 2.7e-48 196.8 328 37.5
SMO198G0100 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 1.3e-47 194.5 283 38.5
arahy.Tifrunner.gnm1.ann1.AST3BR Arachis hypogaea HOM05D006406 ORTHO05D007883 5.5e-41 172.6 158 51.9
AagrBONN_evm.TU.Sc2ySwM_362.2555 Anthoceros agrestis HOM05D006406 ORTHO05D007883 1.9e-33 147.5 114 58.8
MSTRG.16393 Avicennia marina HOM05D006406 ORTHO05D007883 3.0e-31 140.2 156 50.6
FAN02G3513 Fragaria x ananassa HOM05D006406 ORTHO05D007883 6.7e-23 112.5 130 47.7
BcaB07g32734 Brassica carinata HOM05D006406 ORTHO05D007883 6.3e-13 79.3 120 45.0
Aqoxy601s001 Aquilegia oxysepala HOM05D006406 ORTHO05D007883 3.1e-12 77.0 35 100.0
Lsat_1_v5_gn_5_186620 Lactuca sativa HOM05D006406 ORTHO05D007883 5.3e-12 76.3 114 41.2
AL3G41450 Arabidopsis lyrata HOM05D000059 ORTHO05D000128 3.5e-11 73.6 129 39.5
Cre09.g392700 Chlamydomonas reinhardtii HOM05D006406 ORTHO05D007883 4.7e-08 63.2 101 40.6


User provided reference genes

Program Settings