Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G00699 Aquilegia oxysepala HOM05D002567 ORTHO05D007435 1.5e-281 972.2 497 100.0
PSO832G0331 Papaver somniferum HOM05D002567 ORTHO05D007435 3.9e-181 638.6 506 68.0
TAR365G0282 Trochodendron aralioides HOM05D002567 ORTHO05D007435 8.6e-181 637.5 501 68.5
Phvul.007G165166 Phaseolus vulgaris HOM05D002567 ORTHO05D007435 1.7e-176 623.2 502 66.1
TWI14G0999 Tripterygium wilfordii HOM05D002567 ORTHO05D007435 1.1e-175 620.5 503 65.4
VMungo0720G1827 Vigna mungo HOM05D002567 ORTHO05D007435 1.2e-174 617.1 501 65.5
Thecc.01G294000 Theobroma cacao HOM05D002567 ORTHO05D007435 1.9e-172 609.8 504 63.3
Nn5g30061 Nelumbo nucifera HOM05D002567 ORTHO05D007435 2.5e-172 609.4 501 65.7
Ciclev10019856m.g Citrus clementina HOM05D002567 ORTHO05D007435 4.7e-171 605.1 508 63.4
TPR.G33972 Trifolium pratense HOM05D002567 ORTHO05D007435 1.4e-170 603.6 504 64.1
Lj5g0023248 Lotus japonicus HOM05D002567 ORTHO05D007435 2.3e-170 602.8 513 63.5
Lalb_Chr06g0163361 Lupinus albus HOM05D002567 ORTHO05D007435 2.0e-169 599.7 503 65.2
Sed0025005 Sechium edule HOM05D002567 ORTHO05D007435 2.6e-169 599.4 502 63.7
Glyma.02G153800 Glycine max HOM05D002567 ORTHO05D007435 4.4e-169 598.6 500 64.4
QL12p030562 Quercus lobata HOM05D002567 ORTHO05D007435 4.4e-169 598.6 482 65.4
ClCG09G006190 Citrullus lanatus HOM05D002567 ORTHO05D007435 5.8e-169 598.2 506 63.2
Gohir.D08G083800 Gossypium hirsutum HOM05D002567 ORTHO05D007435 1.3e-168 597.0 509 62.7
Gohir.A08G074500 Gossypium hirsutum HOM05D002567 ORTHO05D007435 2.2e-168 596.3 504 62.5
Prupe.8G255700 Prunus persica HOM05D002567 ORTHO05D007435 2.2e-168 596.3 515 63.7
Medtr1g088870 Medicago truncatula HOM05D002567 ORTHO05D007435 2.9e-168 595.9 504 63.9
Rhsim01G0282400 Rhododendron simsii HOM05D002567 ORTHO05D007435 4.9e-168 595.1 503 64.6
RcHm_v2.0_Chr6g0293181 Rosa chinensis HOM05D002567 ORTHO05D007435 2.4e-167 592.8 499 63.5
CiPaw.07G103700 Carya illinoinensis HOM05D002567 ORTHO05D007435 3.2e-167 592.4 508 62.0
MD03G1284200 Malus domestica HOM05D002567 ORTHO05D007435 5.4e-167 591.7 504 63.9
Ca_10357_v3 Cicer arietinum L. HOM05D002567 ORTHO05D007435 7.1e-167 591.3 509 62.9
Glyma.10G020300 Glycine max HOM05D002567 ORTHO05D007435 1.2e-166 590.5 500 64.4
FvH4_c6g00080 Fragaria vesca HOM05D002567 ORTHO05D007435 1.6e-166 590.1 499 63.3
Cpa.g.sc9.190 Carica papaya HOM05D002567 ORTHO05D007435 2.1e-166 589.7 506 61.5
COL.COLO4_07998 Corchorus olitorius HOM05D002567 ORTHO05D006538 2.1e-166 589.7 484 65.3
GSVIVG01010968001 Vitis vinifera HOM05D002567 ORTHO05D007435 3.5e-166 589.0 506 63.4
Gorai.004G088200 Gossypium raimondii HOM05D002567 ORTHO05D007435 1.3e-165 587.0 527 60.5
FAN20G2691 Fragaria x ananassa HOM05D002567 ORTHO05D007435 3.3e-164 582.4 521 61.4
FAN24G0883 Fragaria x ananassa HOM05D002567 ORTHO05D007435 3.3e-164 582.4 517 61.3
Actinidia24843 Actinidia chinensis HOM05D002567 ORTHO05D007435 1.6e-163 580.1 520 62.5
Cfa005987 Carpinus fangiana HOM05D002567 ORTHO05D007435 2.1e-163 579.7 441 68.3
Cc01_g20520 Coffea canephora HOM05D002567 ORTHO05D007435 6.2e-163 578.2 465 64.3
FvH4_c6g00110 Fragaria vesca HOM05D002567 ORTHO05D007435 6.2e-163 578.2 478 64.4
CSS0004593 Camellia sinensis var. sinensis HOM05D002567 ORTHO05D007435 1.1e-162 577.4 500 63.4
Manes.05G065800 Manihot esculenta HOM05D002567 ORTHO05D007435 3.1e-162 575.9 503 61.8
CANSAT25G3369 Cannabis sativa HOM05D002567 ORTHO05D007435 1.5e-161 573.5 497 62.8
CSS0018114 Camellia sinensis var. sinensis HOM05D002567 ORTHO05D007435 2.6e-161 572.8 500 63.0
vmacro14988 Vaccinium macrocarpon HOM05D002567 ORTHO05D007435 4.4e-161 572.0 500 63.0
Eucgr.K03452 Eucalyptus grandis HOM05D002567 ORTHO05D007435 5.4e-159 565.1 507 60.4
Hund05401 Selenicereus undatus HOM05D002567 ORTHO05D007435 1.6e-158 563.5 518 60.4
FAN15G3695 Fragaria x ananassa HOM05D002567 ORTHO05D007435 1.7e-157 560.1 554 56.9
Sc05g0004310 Simmondsia chinensis HOM05D002567 ORTHO05D007435 2.3e-157 559.7 505 59.8
SalBow3G3633 Salvia bowleyana HOM05D002567 ORTHO05D007435 1.1e-156 557.4 505 60.0
PGR044G2614 Punica granatum HOM05D002567 ORTHO05D007435 1.9e-156 556.6 504 60.1
Lj2C1189T5 Lonicera japonica HOM05D002567 ORTHO05D007435 2.5e-156 556.2 521 60.8
Oeu046707.1 Olea europaea HOM05D002567 ORTHO05D007435 5.6e-156 555.1 506 60.3
PGSC0003DMG402011364 Solanum tuberosum HOM05D002567 ORTHO05D007435 5.6e-156 555.1 499 60.1
ATR0706G146 Amborella trichopoda HOM05D002567 ORTHO05D007435 9.6e-156 554.3 436 66.7
Sopen09g029600 Solanum pennellii HOM05D002567 ORTHO05D007435 6.2e-155 551.6 499 59.7
THA.LOC104817512 Tarenaya hassleriana HOM05D002567 ORTHO05D007435 8.9e-154 547.7 509 57.6
Aa31LG1G29180 Aethionema arabicum HOM05D002567 ORTHO05D007435 2.6e-153 546.2 506 59.9
Migut.D00184 Erythranthe guttata HOM05D002567 ORTHO05D007435 4.4e-153 545.4 506 59.3
Os03g0346800 Oryza sativa ssp. japonica HOM05D002567 ORTHO05D007435 9.9e-153 544.3 444 62.8
Thhalv10001431m.g Eutrema salsugineum HOM05D002567 ORTHO05D007435 1.4e-151 540.4 459 62.1
Haze_04858 Corylus avellana HOM05D002567 ORTHO05D006538 5.4e-151 538.5 438 65.3
Sp4g29760 Schrenkiella parvula HOM05D002567 ORTHO05D007435 1.2e-150 537.3 485 59.8
Duzib133G1128 Durio zibethinus HOM05D002567 ORTHO05D007435 1.6e-150 537.0 501 57.9
Nitab4.5_0001697g0140 Nicotiana tabacum HOM05D002567 ORTHO05D006538 3.5e-150 535.8 543 55.6
BcaB01g03155 Brassica carinata HOM05D002567 ORTHO05D007435 1.0e-149 534.3 442 63.1
A03p26080 Brassica napus HOM05D002567 ORTHO05D007435 5.1e-149 531.9 438 63.7
BraA03t11823Z Brassica rapa HOM05D002567 ORTHO05D007435 6.6e-149 531.6 438 63.7
SGA_v2.0_scaffold1G00388 Striga asiatica HOM05D002567 ORTHO05D007435 6.6e-149 531.6 505 58.6
CARHR143220 Cardamine hirsuta HOM05D002567 ORTHO05D007435 8.7e-149 531.2 478 60.0
C03p31100 Brassica napus HOM05D002567 ORTHO05D007435 2.5e-148 529.6 437 63.4
BolC3t15458H Brassica oleracea HOM05D002567 ORTHO05D007435 2.1e-147 526.6 438 63.0
AT2G47830 Arabidopsis thaliana HOM05D002567 ORTHO05D007435 3.6e-147 525.8 475 58.9
AUR62043263 Chenopodium quinoa HOM05D002567 ORTHO05D007435 4.8e-147 525.4 505 59.0
BcaC01g05016 Brassica carinata HOM05D002567 ORTHO05D007435 1.8e-146 523.5 438 62.8
DCAR_012404 Daucus carota HOM05D002567 ORTHO05D007435 2.0e-145 520.0 486 59.9
AL4G47410 Arabidopsis lyrata HOM05D002567 ORTHO05D007435 1.7e-144 516.9 434 62.2
Nitab4.5_0001447g0040 Nicotiana tabacum HOM05D002567 ORTHO05D007435 2.3e-141 506.5 499 56.9
CAN.G1562.6 Capsicum annuum HOM05D002567 ORTHO05D007435 2.8e-139 499.6 443 60.0
ECA248G3501 Erigeron canadensis HOM05D002567 ORTHO05D007435 2.8e-139 499.6 406 62.1
AUR62033190 Chenopodium quinoa HOM05D002567 ORTHO05D007435 8.1e-139 498.0 424 62.7
HanXRQChr01g0001661 Helianthus annuus HOM05D002567 ORTHO05D007435 4.0e-138 495.7 451 58.5
Lsat_1_v5_gn_5_189341 Lactuca sativa HOM05D002567 ORTHO05D007435 9.0e-138 494.6 477 55.1
Ah.15g093860 Amaranthus hybridus HOM05D002567 ORTHO05D007435 7.6e-137 491.5 494 55.7
Dinv19731 Davidia involucrata HOM05D002567 ORTHO05D007435 1.3e-131 474.2 346 71.1
Hma1.2p1_0399F.1_g143930 Hydrangea macrophylla HOM05D002567 ORTHO05D007435 1.1e-130 471.1 365 69.3
Psat6g167000 Pisum sativum HOM05D002567 ORTHO05D007435 2.7e-126 456.4 357 67.8
MELO3C016044.2 Cucumis melo HOM05D002567 ORTHO05D007435 2.9e-120 436.4 497 51.9
CsaV3_7G028940 Cucumis sativus L. HOM05D002567 ORTHO05D007435 5.7e-116 422.2 325 68.6
HPP92_011840 Vanilla planifolia HOM05D002567 ORTHO05D007435 9.7e-116 421.4 303 68.3
Mapoly0007s0103 Marchantia polymorpha HOM05D002567 ORTHO05D007435 3.7e-107 392.9 347 58.2
Carub.0004s3055 Capsella rubella HOM05D002567 ORTHO05D007435 4.8e-107 392.5 339 61.1
Sed0015917 Sechium edule HOM05D002567 ORTHO05D007435 2.6e-105 386.7 339 61.9
Potri.002G209023 Populus trichocarpa HOM05D002567 ORTHO05D007435 1.9e-103 380.6 289 67.5
SMO145G0291 Selaginella moellendorffii HOM05D002567 ORTHO05D007435 3.6e-102 376.3 334 57.8
Pp3c10_1060 Physcomitrium patens HOM05D002567 ORTHO05D007435 1.0e-101 374.8 503 43.1
Pp3c14_1830 Physcomitrium patens HOM05D002567 ORTHO05D007435 1.6e-97 360.9 514 40.7
Zm00001eb016640 Zea mays HOM05D002567 ORTHO05D007435 4.0e-93 346.3 279 63.8
CDE02G2579 Ceratophyllum demersum HOM05D002567 ORTHO05D007435 6.5e-88 328.9 316 57.9
AUR62033191 Chenopodium quinoa HOM05D002567 ORTHO05D007435 1.0e-80 305.1 246 64.6
FAN19G1365 Fragaria x ananassa HOM05D002567 ORTHO05D007435 1.0e-80 305.1 267 61.4
Solyc09g074740.2 Solanum lycopersicum HOM05D002567 ORTHO05D007435 1.6e-78 297.7 277 58.8
Peaxi162Scf00067g01814 Petunia axillaris HOM05D002567 ORTHO05D007435 2.3e-77 293.9 292 56.2
Atru.chr5.1231 Acer truncatum HOM05D002567 ORTHO05D007435 6.8e-77 292.4 280 57.1
Peaxi162Scf00067g01819 Petunia axillaris HOM05D002567 ORTHO05D007435 2.0e-68 264.2 229 61.6
Solyc09g074750.3 Solanum lycopersicum HOM05D002567 ORTHO05D007435 7.5e-68 262.3 232 59.5
Atru.chr5.1230 Acer truncatum HOM05D002567 ORTHO05D007435 7.8e-65 252.3 207 62.3
arahy.Tifrunner.gnm1.ann1.XK0FMC Arachis hypogaea HOM05D002567 ORTHO05D007435 2.3e-40 171.0 347 39.2
arahy.Tifrunner.gnm1.ann1.5I5ID6 Arachis hypogaea HOM05D002567 ORTHO05D007435 5.6e-31 139.8 154 53.2
arahy.Tifrunner.gnm1.ann1.L0WASJ Arachis hypogaea HOM05D002567 ORTHO05D007435 2.1e-30 137.9 154 52.6
CAN.G1349.13 Capsicum annuum HOM05D000586 ORTHO05D007435 1.1e-29 135.6 120 59.2
Cfa024758 Carpinus fangiana HOM05D002567 ORTHO05D007435 1.1e-29 135.6 343 30.6
PRCOL_00000973 Prasinoderma coloniale HOM05D002567 ORTHO05D007435 1.2e-25 122.1 279 29.7
DCAR_017872 Daucus carota HOM05D002567 ORTHO05D007435 3.5e-25 120.6 75 74.7
MCO08G095 Micromonas commoda HOM05D002567 ORTHO05D007435 1.0e-24 119.0 334 29.0
CAN.G312.11 Capsicum annuum HOM05D000586 ORTHO05D003356 5.3e-21 106.7 78 66.7
Nitab4.5_0011064g0040 Nicotiana tabacum HOM05D002567 ORTHO05D007435 6.9e-21 106.3 109 57.8
Duzib133G1109 Durio zibethinus HOM05D002567 ORTHO05D007435 2.6e-20 104.4 91 53.8
CARHR055860 Cardamine hirsuta HOM05D002567 ORTHO05D007435 1.3e-19 102.1 92 58.7
Duzib133G0811 Durio zibethinus HOM05D002567 ORTHO05D007435 6.4e-19 99.8 91 52.7
Ciclev10006598m.g Citrus clementina HOM05D002567 ORTHO05D007435 1.1e-18 99.0 64 78.1
Actinidia21062 Actinidia chinensis HOM05D002567 ORTHO05D007435 2.4e-18 97.8 121 52.9
CARHR220570 Cardamine hirsuta HOM05D002567 ORTHO05D007435 1.6e-17 95.1 95 55.8
CAN.G2.56 Capsicum annuum HOM05D000586 ORTHO05D003356 5.6e-15 86.7 55 70.9
Nitab4.5_0005578g0030 Nicotiana tabacum HOM05D002567 ORTHO05D007435 2.4e-13 81.3 85 52.9
Oeu011429.1 Olea europaea HOM05D002567 ORTHO05D007435 5.8e-12 76.6 50 72.0
SEGI_29117 Sequoiadendron giganteum HOM05D002567 ORTHO05D007435 4.9e-11 73.6 90 44.4
EL10Ac7g17491 Beta vulgaris HOM05D002567 ORTHO05D007435 2.1e-09 68.2 41 75.6
Sopen09g029580 Solanum pennellii HOM05D002567 ORTHO05D007435 2.7e-09 67.8 47 66.0
AUR62042552 Chenopodium quinoa HOM05D004615 ORTHO05D000004 6.7e-08 63.2 47 61.7
Cre03.g160750 Chlamydomonas reinhardtii HOM05D000870 ORTHO05D000715 1.1e-07 62.4 305 23.3
arahy.Tifrunner.gnm1.ann1.66ANXA Arachis hypogaea HOM05D002567 ORTHO05D007435 1.5e-07 62.0 41 68.3
AUR62043266 Chenopodium quinoa HOM05D003402 ORTHO05D003939 2.5e-07 61.2 44 70.5
PSO675G5941 Papaver somniferum HOM05D000870 ORTHO05D000715 2.5e-07 61.2 305 21.3
SalBow3G3649 Salvia bowleyana HOM05D000870 ORTHO05D000715 2.5e-07 61.2 321 21.8
Lalb_Chr15g0085671 Lupinus albus HOM05D000870 ORTHO05D000715 3.3e-07 60.8 320 22.5
PSO339G4208 Papaver somniferum HOM05D000870 ORTHO05D000715 4.3e-07 60.5 322 21.1
PSO384G5112 Papaver somniferum HOM05D000870 ORTHO05D000715 2.2e-06 58.2 322 22.0
Lsat_1_v5_gn_5_86321 Lactuca sativa HOM05D000295 ORTHO05D001778 2.8e-06 57.8 32 84.4
AUR62040423 Chenopodium quinoa HOM05D000107 ORTHO05D000062 3.7e-06 57.4 37 67.6
Cpa.g.sc32.72 Carica papaya HOM05D000870 ORTHO05D000715 8.2e-06 56.2 173 24.9


User provided reference genes

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