Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G00659 Aquilegia oxysepala HOM05D002420 ORTHO05D002422 2.5e-186 655.2 309 100.0
Aqoxy3G00375 Aquilegia oxysepala HOM05D002420 ORTHO05D002422 1.2e-58 231.1 275 45.8
Aqoxy3G00361 Aquilegia oxysepala HOM05D002420 ORTHO05D002422 1.4e-56 224.2 270 44.4
Aqoxy5G00664 Aquilegia oxysepala HOM05D002420 ORTHO05D002422 1.0e-51 208.0 237 46.4
Aqoxy3G00376 Aquilegia oxysepala HOM05D002420 ORTHO05D002422 5.6e-45 185.7 220 44.1
TAR371G0827 Trochodendron aralioides HOM05D002420 ORTHO05D002422 4.7e-44 182.6 281 38.4
Nn4g25094 Nelumbo nucifera HOM05D002420 ORTHO05D002422 6.8e-43 178.7 279 38.0
Dinv38297 Davidia involucrata HOM05D004446 ORTHO05D005346 1.4e-40 171.0 258 39.5
Aqoxy5G00669 Aquilegia oxysepala HOM05D002420 ORTHO05D002422 3.3e-37 159.8 125 60.8
CSS0028398 Camellia sinensis var. sinensis HOM05D002420 ORTHO05D002422 1.6e-36 157.5 260 37.3
CSS0031967 Camellia sinensis var. sinensis HOM05D002420 ORTHO05D002422 1.6e-36 157.5 260 37.3
GSVIVG01026445001 Vitis vinifera HOM05D002420 ORTHO05D002422 6.2e-36 155.6 286 34.6
QL05p077107 Quercus lobata HOM05D002420 ORTHO05D002422 8.0e-36 155.2 268 31.0
QL93p0073_1187 Quercus lobata HOM05D002420 ORTHO05D002422 8.0e-36 155.2 268 31.0
Atru.chr9.129 Acer truncatum HOM05D002420 ORTHO05D002422 1.0e-35 154.8 277 32.9
Ciclev10020526m.g Citrus clementina HOM05D002420 ORTHO05D002422 1.0e-35 154.8 251 35.5
Manes.05G199200 Manihot esculenta HOM05D002420 ORTHO05D002422 6.8e-35 152.1 258 32.9
Actinidia35149 Actinidia chinensis HOM05D002420 ORTHO05D002422 8.9e-35 151.8 264 34.8
Duzib168G0815 Durio zibethinus HOM05D002420 ORTHO05D002422 4.4e-34 149.4 284 32.7
vmacro20419 Vaccinium macrocarpon HOM05D002420 ORTHO05D002422 4.4e-34 149.4 257 37.4
Rhsim10G0188800 Rhododendron simsii HOM05D002420 ORTHO05D002422 2.2e-33 147.1 258 35.3
Thecc.09G282200 Theobroma cacao HOM05D002420 ORTHO05D002422 3.7e-33 146.4 274 32.5
DCAR_014748 Daucus carota HOM05D002420 ORTHO05D002422 2.4e-32 143.7 256 34.0
ClCG06G012330 Citrullus lanatus HOM05D000759 ORTHO05D000574 3.2e-32 143.3 260 31.9
Lalb_Chr16g0386521 Lupinus albus HOM05D002420 ORTHO05D002422 4.1e-32 142.9 285 31.9
COL.COLO4_19852 Corchorus olitorius HOM05D002420 ORTHO05D002422 2.7e-31 140.2 284 33.1
CsaV3_1G024340 Cucumis sativus L. HOM05D002420 ORTHO05D002422 3.5e-31 139.8 254 31.5
CsaV3_1G028850 Cucumis sativus L. HOM05D002420 ORTHO05D002422 3.5e-31 139.8 253 31.6
arahy.Tifrunner.gnm1.ann1.D2CQLD Arachis hypogaea HOM05D002420 ORTHO05D002422 6.0e-31 139.0 217 33.6
Sed0018683 Sechium edule HOM05D002420 ORTHO05D002422 6.0e-31 139.0 259 32.0
arahy.Tifrunner.gnm1.ann1.TS9750 Arachis hypogaea HOM05D002420 ORTHO05D002422 1.3e-30 137.9 217 33.6
Lalb_Chr05g0225771 Lupinus albus HOM05D002420 ORTHO05D002422 1.3e-30 137.9 239 33.5
Sabra15G0023700 Salix brachista HOM05D002420 ORTHO05D002422 3.9e-30 136.3 238 33.2
CANSAT01G0107 Cannabis sativa HOM05D002420 ORTHO05D002422 5.0e-30 136.0 259 31.3
MELO3C010232.2 Cucumis melo HOM05D002420 ORTHO05D002422 5.0e-30 136.0 260 31.5
Migut.M00586 Erythranthe guttata HOM05D002420 ORTHO05D002422 5.0e-30 136.0 255 32.9
Migut.O00341 Erythranthe guttata HOM05D002420 ORTHO05D002422 5.0e-30 136.0 255 32.9
PSO782G2286 Papaver somniferum HOM05D002420 ORTHO05D002422 8.6e-30 135.2 223 35.4
SGA_v2.0_scaffold90G27757 Striga asiatica HOM05D002420 ORTHO05D002422 8.6e-30 135.2 258 32.2
Migut.O00261 Erythranthe guttata HOM05D002420 ORTHO05D002422 1.1e-29 134.8 269 31.2
Nitab4.5_0003040g0190 Nicotiana tabacum HOM05D000001 ORTHO05D010224 1.9e-29 134.0 291 33.3
PSO063G5348 Papaver somniferum HOM05D002420 ORTHO05D002422 1.9e-29 134.0 223 35.0
Cpa.g.sc42.22 Carica papaya HOM05D002420 ORTHO05D002422 3.3e-29 133.3 256 32.8
PGSC0003DMG400010178 Solanum tuberosum HOM05D002420 ORTHO05D002422 5.6e-29 132.5 252 34.5
Potri.015G028500 Populus trichocarpa HOM05D002420 ORTHO05D002422 1.6e-28 131.0 259 31.7
Lj4g0009025 Lotus japonicus HOM05D002420 ORTHO05D002422 2.1e-28 130.6 256 32.4
Solyc03g098570.1 Solanum lycopersicum HOM05D002420 ORTHO05D002422 2.8e-28 130.2 252 34.9
Gorai.006G112200 Gossypium raimondii HOM05D000001 ORTHO05D010224 6.2e-28 129.0 232 34.1
Oeu038400.1 Olea europaea HOM05D002420 ORTHO05D002422 8.1e-28 128.6 255 34.1
Cc04_g08540 Coffea canephora HOM05D002420 ORTHO05D002422 1.1e-27 128.3 259 34.4
Gohir.D09G095500 Gossypium hirsutum HOM05D000001 ORTHO05D010224 1.1e-27 128.3 232 34.1
Sopen03g029280 Solanum pennellii HOM05D002420 ORTHO05D002422 1.1e-27 128.3 247 34.8
Ca_22427_v3 Cicer arietinum L. HOM05D002420 ORTHO05D002422 1.4e-27 127.9 218 32.1
COL.COLO4_11599 Corchorus olitorius HOM05D002420 ORTHO05D002422 1.8e-27 127.5 243 36.6
Gohir.A09G095800 Gossypium hirsutum HOM05D000001 ORTHO05D010224 1.8e-27 127.5 232 34.5
Peaxi162Scf00171g00214 Petunia axillaris HOM05D002420 ORTHO05D002422 1.5e-26 124.4 255 32.5
CAN.G929.25 Capsicum annuum HOM05D002420 ORTHO05D002422 2.6e-26 123.6 253 33.6
Nitab4.5_0000782g0110 Nicotiana tabacum HOM05D002420 ORTHO05D002422 4.4e-26 122.9 262 32.8
Aqoxy2G02259 Aquilegia oxysepala HOM05D002420 ORTHO05D002422 7.5e-26 122.1 149 44.3
Aqoxy59s001 Aquilegia oxysepala HOM05D002420 ORTHO05D002422 7.5e-26 122.1 149 44.3
DCAR_015611 Daucus carota HOM05D002420 ORTHO05D002422 3.2e-24 116.7 258 30.6
Psat4g001840 Pisum sativum HOM05D002420 ORTHO05D002422 3.2e-24 116.7 212 30.2
SalBow5G1081 Salvia bowleyana HOM05D002420 ORTHO05D002422 4.1e-24 116.3 272 32.0
EL10Ac8g18839 Beta vulgaris HOM05D002420 ORTHO05D002422 5.4e-24 115.9 258 30.6
Aqoxy4G01072 Aquilegia oxysepala HOM05D002420 ORTHO05D002422 9.2e-24 115.2 237 36.7
TPR.G5959 Trifolium pratense HOM05D002420 ORTHO05D002422 1.2e-23 114.8 201 30.8
Medtr4g134390 Medicago truncatula HOM05D002420 ORTHO05D002422 1.0e-22 111.7 210 29.5
Phvul.002G082800 Phaseolus vulgaris HOM05D002420 ORTHO05D002422 3.9e-22 109.8 256 30.5
Aqoxy3G00828 Aquilegia oxysepala HOM05D002420 ORTHO05D002422 1.6e-20 104.4 112 48.2
Ah.09g231660 Amaranthus hybridus HOM05D002420 ORTHO05D002422 2.1e-20 104.0 261 28.4
Aqoxy2G00892 Aquilegia oxysepala HOM05D002420 ORTHO05D002422 2.1e-20 104.0 75 61.3
Glyma.01G083900 Glycine max HOM05D002420 ORTHO05D002422 2.8e-20 103.6 198 30.8
AUR62040762 Chenopodium quinoa HOM05D002420 ORTHO05D002422 3.6e-20 103.2 260 26.9
AUR62033031 Chenopodium quinoa HOM05D002420 ORTHO05D002422 1.8e-19 100.9 232 28.4
Lj2g0005175 Lotus japonicus HOM05D002420 ORTHO05D002422 1.8e-19 100.9 217 29.0
TPR.G18684 Trifolium pratense HOM05D002420 ORTHO05D002422 1.5e-18 97.8 259 27.4
Glyma.08G259900 Glycine max HOM05D002420 ORTHO05D002422 2.0e-18 97.4 198 29.3
QL04p013493 Quercus lobata HOM05D002420 ORTHO05D002422 2.9e-17 93.6 235 26.8
QL04p012713 Quercus lobata HOM05D002420 ORTHO05D002422 4.9e-17 92.8 180 29.4
QL04p013477 Quercus lobata HOM05D002420 ORTHO05D002422 4.9e-17 92.8 180 29.4
QL04p019597 Quercus lobata HOM05D002420 ORTHO05D002422 1.1e-16 91.7 155 32.3
QL04p012655 Quercus lobata HOM05D002420 ORTHO05D002422 1.9e-16 90.9 181 30.4
QL04p020224 Quercus lobata HOM05D002420 ORTHO05D002422 2.4e-16 90.5 155 32.9
QL04p013554 Quercus lobata HOM05D002420 ORTHO05D002422 3.2e-16 90.1 181 29.8
QL04p019991 Quercus lobata HOM05D002420 ORTHO05D002422 4.1e-16 89.7 155 32.3
QL04p020508 Quercus lobata HOM05D002420 ORTHO05D002422 5.4e-16 89.4 149 32.9
QL04p012695 Quercus lobata HOM05D002420 ORTHO05D002422 7.1e-16 89.0 178 29.8
QL04p012751 Quercus lobata HOM05D002420 ORTHO05D002422 9.2e-16 88.6 180 30.0
QL04p013526 Quercus lobata HOM05D002420 ORTHO05D002422 9.2e-16 88.6 155 33.5
QL04p013429 Quercus lobata HOM05D002420 ORTHO05D002422 1.2e-15 88.2 180 29.4
QL04p020660 Quercus lobata HOM05D002420 ORTHO05D002422 6.0e-15 85.9 155 31.6
QL04p013515 Quercus lobata HOM05D002420 ORTHO05D002422 1.3e-14 84.7 154 31.8
QL04p012671 Quercus lobata HOM05D002420 ORTHO05D002422 1.7e-14 84.3 154 31.8
arahy.Tifrunner.gnm1.ann1.6LG1IJ Arachis hypogaea HOM05D002420 ORTHO05D002422 2.3e-14 84.0 292 24.7
QL04p019734 Quercus lobata HOM05D002420 ORTHO05D002422 7.3e-13 79.0 143 32.2
QL04p012624 Quercus lobata HOM05D002420 ORTHO05D002422 1.6e-12 77.8 124 32.3
Solyc03g098580.1 Solanum lycopersicum HOM05D000001 ORTHO05D010224 8.1e-12 75.5 144 31.9
arahy.Tifrunner.gnm1.ann1.XHBX5X Arachis hypogaea HOM05D002420 ORTHO05D002422 2.6e-10 70.5 240 25.8
TAR371G0475 Trochodendron aralioides HOM05D002420 ORTHO05D002422 5.8e-10 69.3 197 25.9
COL.COLO4_31566 Corchorus olitorius HOM05D008040 ORTHO05D010075 4.9e-09 66.2 198 26.8
TAR629G0425 Trochodendron aralioides HOM05D002420 ORTHO05D002422 1.9e-08 64.3 193 28.0
Manes.02G092400 Manihot esculenta HOM05D002420 ORTHO05D002422 5.4e-08 62.8 150 28.0
AUR62003167 Chenopodium quinoa HOM05D002420 ORTHO05D002422 2.7e-07 60.5 136 29.4
MBI05_g20724_MAGBIO Magnolia biondii HOM05D000664 ORTHO05D000491 2.7e-07 60.5 131 26.7
CSS0016313 Camellia sinensis var. sinensis HOM05D008040 ORTHO05D010075 3.5e-07 60.1 121 27.3
RcHm_v2.0_Chr2g0101871 Rosa chinensis HOM05D002420 ORTHO05D002422 3.5e-07 60.1 152 32.2
CSS0013591 Camellia sinensis var. sinensis HOM05D008040 ORTHO05D010075 6.0e-07 59.3 121 27.3
CsaV3_4G005120 Cucumis sativus L. HOM05D002420 ORTHO05D002422 7.8e-07 58.9 87 40.2
AUR62007985 Chenopodium quinoa HOM05D001579 ORTHO05D003470 1.0e-06 58.5 122 31.1
DCAR_015582 Daucus carota HOM05D002420 ORTHO05D002422 1.0e-06 58.5 88 35.2
CSS0010874 Camellia sinensis var. sinensis HOM05D008040 ORTHO05D010075 1.3e-06 58.2 119 27.7
MD02G1150200 Malus domestica HOM05D002420 ORTHO05D002422 3.0e-06 57.0 129 30.2
MD16G1149000 Malus domestica HOM05D007162 ORTHO05D007631 3.0e-06 57.0 145 26.9
AUR62007095 Chenopodium quinoa HOM05D000664 ORTHO05D000491 3.9e-06 56.6 158 27.8
Thecc.06G054800 Theobroma cacao HOM05D000664 ORTHO05D000491 5.1e-06 56.2 157 26.8
Sabra08G0010200 Salix brachista HOM05D008040 ORTHO05D010075 6.6e-06 55.8 155 25.8
TAR629G2457 Trochodendron aralioides HOM05D013823 ORTHO05D015322 6.6e-06 55.8 120 30.8
FAN26G2215 Fragaria x ananassa HOM05D002420 ORTHO05D002422 8.7e-06 55.5 78 39.7
FAN28G1844 Fragaria x ananassa HOM05D002420 ORTHO05D002422 8.7e-06 55.5 91 37.4


User provided reference genes

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