Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G00644 Aquilegia oxysepala HOM05D006775 ORTHO05D008344 4.6e-70 267.7 128 100.0
Aqoxy5G01958 Aquilegia oxysepala HOM05D006775 ORTHO05D008344 6.3e-35 151.0 94 77.7
QL06p007489 Quercus lobata HOM05D006775 ORTHO05D008344 1.9e-23 112.8 90 56.7
Hma1.2p1_0823F.1_g224630 Hydrangea macrophylla HOM05D006775 ORTHO05D008344 1.6e-22 109.8 90 51.1
TAR633G2345 Trochodendron aralioides HOM05D001386 ORTHO05D003791 1.4e-21 106.7 91 51.6
Actinidia40225 Actinidia chinensis HOM05D006775 ORTHO05D008344 2.3e-21 105.9 83 54.2
Haze_01265 Corylus avellana HOM05D006775 ORTHO05D008344 2.0e-20 102.8 87 55.2
Cfa015346 Carpinus fangiana HOM05D006775 ORTHO05D008344 3.3e-20 102.1 87 55.2
Nn4g25991 Nelumbo nucifera HOM05D006775 ORTHO05D008344 4.4e-20 101.7 104 45.2
Sc25g0004760 Simmondsia chinensis HOM05D006775 ORTHO05D008344 7.4e-20 100.9 78 56.4
CSS0032456 Camellia sinensis var. sinensis HOM05D006775 ORTHO05D008344 9.7e-20 100.5 88 50.0
Nn3g21322 Nelumbo nucifera HOM05D006775 ORTHO05D008344 1.7e-19 99.8 95 50.5
ECA240G4404 Erigeron canadensis HOM05D006775 ORTHO05D008344 2.8e-19 99.0 83 50.6
COL.COLO4_13925 Corchorus olitorius HOM05D006775 ORTHO05D008344 3.7e-19 98.6 82 54.9
vmacro08201 Vaccinium macrocarpon HOM05D006775 ORTHO05D008344 4.8e-19 98.2 80 52.5
Atru.chr4.2756 Acer truncatum HOM05D006775 ORTHO05D008344 6.3e-19 97.8 88 51.1
Cc03_g02340 Coffea canephora HOM05D006775 ORTHO05D008344 8.2e-19 97.4 85 52.9
CANSAT78G0382 Cannabis sativa HOM05D006775 ORTHO05D008344 1.1e-18 97.1 91 48.4
Ciclev10006777m.g Citrus clementina HOM05D000611 ORTHO05D000809 1.1e-18 97.1 90 51.1
Lj3A812T71 Lonicera japonica HOM05D006775 ORTHO05D008344 1.8e-18 96.3 83 53.0
Rhsim04G0216500 Rhododendron simsii HOM05D006775 ORTHO05D008344 1.8e-18 96.3 106 43.4
Thecc.04G277900 Theobroma cacao HOM05D006775 ORTHO05D008344 3.1e-18 95.5 81 53.1
TWI09G0159 Tripterygium wilfordii HOM05D006775 ORTHO05D008344 3.1e-18 95.5 86 51.2
TWI09G0165 Tripterygium wilfordii HOM05D006775 ORTHO05D008344 3.1e-18 95.5 86 51.2
TWI09G0706 Tripterygium wilfordii HOM05D006775 ORTHO05D008344 3.1e-18 95.5 86 51.2
Lalb_Chr13g0303871 Lupinus albus HOM05D006775 ORTHO05D008344 5.3e-18 94.7 84 52.4
Glyma.07G251400 Glycine max HOM05D006775 ORTHO05D008344 7.0e-18 94.4 83 53.0
Sed0012602 Sechium edule HOM05D006775 ORTHO05D008344 7.0e-18 94.4 82 50.0
arahy.Tifrunner.gnm1.ann1.HV9WHL Arachis hypogaea HOM05D006775 ORTHO05D008344 9.1e-18 94.0 88 52.3
arahy.Tifrunner.gnm1.ann1.UNR197 Arachis hypogaea HOM05D006775 ORTHO05D008344 9.1e-18 94.0 88 52.3
Lsat_1_v5_gn_5_50761 Lactuca sativa HOM05D006775 ORTHO05D008344 1.2e-17 93.6 83 49.4
Oeu062887.1 Olea europaea HOM05D006775 ORTHO05D008344 1.2e-17 93.6 89 48.3
DCAR_002444 Daucus carota HOM05D006775 ORTHO05D008344 2.6e-17 92.4 86 48.8
Glyma.17G022900 Glycine max HOM05D006775 ORTHO05D008344 2.6e-17 92.4 83 51.8
MBI18_g12413_MAGBIO Magnolia biondii HOM05D006775 ORTHO05D008344 2.6e-17 92.4 86 51.2
ClCG05G005800 Citrullus lanatus HOM05D006775 ORTHO05D008344 3.5e-17 92.0 103 44.7
Duzib151G0911 Durio zibethinus HOM05D006775 ORTHO05D008344 4.5e-17 91.7 72 56.9
Phvul.003G101000 Phaseolus vulgaris HOM05D006775 ORTHO05D008344 4.5e-17 91.7 85 48.2
PGR004G1240 Punica granatum HOM05D006775 ORTHO05D008344 4.5e-17 91.7 83 51.8
Gohir.D10G166800 Gossypium hirsutum HOM05D006775 ORTHO05D008344 5.9e-17 91.3 80 56.2
Gorai.011G186100 Gossypium raimondii HOM05D006775 ORTHO05D008344 5.9e-17 91.3 80 56.2
MD00G1092600 Malus domestica HOM05D006775 ORTHO05D008344 5.9e-17 91.3 80 53.8
GSVIVG01017799001 Vitis vinifera HOM05D000611 ORTHO05D000809 5.9e-17 91.3 83 50.6
Gohir.A10G101330 Gossypium hirsutum HOM05D006775 ORTHO05D008344 7.7e-17 90.9 80 55.0
Manes.15G016600 Manihot esculenta HOM05D006775 ORTHO05D008344 7.7e-17 90.9 82 52.4
Migut.G00207 Erythranthe guttata HOM05D006775 ORTHO05D008344 1.0e-16 90.5 83 48.2
HanXRQChr03g0079491 Helianthus annuus HOM05D006775 ORTHO05D008344 1.0e-16 90.5 80 48.8
PSO832G0266 Papaver somniferum HOM05D006775 ORTHO05D008344 1.0e-16 90.5 77 55.8
Peaxi162Scf00386g00010 Petunia axillaris HOM05D006775 ORTHO05D008344 1.0e-16 90.5 86 48.8
Nitab4.5_0003256g0010 Nicotiana tabacum HOM05D006775 ORTHO05D008344 1.3e-16 90.1 80 51.2
VMungo1215G1959 Vigna mungo HOM05D006775 ORTHO05D008344 1.7e-16 89.7 85 47.1
Solyc01g067280.3 Solanum lycopersicum HOM05D006775 ORTHO05D008344 2.2e-16 89.4 84 48.8
Sopen01g029070 Solanum pennellii HOM05D006775 ORTHO05D008344 2.2e-16 89.4 84 48.8
Prupe.1G365500 Prunus persica HOM05D006775 ORTHO05D008344 2.9e-16 89.0 80 51.2
SalBow2G3406 Salvia bowleyana HOM05D006775 ORTHO05D008344 5.0e-16 88.2 80 51.2
CiPaw.02G086400 Carya illinoinensis HOM05D006775 ORTHO05D008344 6.5e-16 87.8 78 56.4
CDE08G1672 Ceratophyllum demersum HOM05D006775 ORTHO05D008344 6.5e-16 87.8 93 46.2
EL10Ac3g06567 Beta vulgaris HOM05D006775 ORTHO05D008344 8.5e-16 87.4 80 51.2
MELO3C006607.2 Cucumis melo HOM05D006775 ORTHO05D008344 8.5e-16 87.4 80 48.8
Eucgr.H03770 Eucalyptus grandis HOM05D006775 ORTHO05D008344 8.5e-16 87.4 78 52.6
Medtr4g118790 Medicago truncatula HOM05D006775 ORTHO05D008344 8.5e-16 87.4 83 53.0
PGSC0003DMG400022660 Solanum tuberosum HOM05D006775 ORTHO05D008344 8.5e-16 87.4 84 48.8
Cpa.g.sc1008.3 Carica papaya HOM05D006775 ORTHO05D008344 1.1e-15 87.0 72 58.3
CsaV3_3G014150 Cucumis sativus L. HOM05D006775 ORTHO05D008344 1.1e-15 87.0 86 44.2
Nitab4.5_0005595g0020 Nicotiana tabacum HOM05D006775 ORTHO05D008344 1.1e-15 87.0 80 48.8
AUR62042989 Chenopodium quinoa HOM05D006775 ORTHO05D008344 1.5e-15 86.7 86 51.2
SGA_v2.0_scaffold57G20240 Striga asiatica HOM05D006775 ORTHO05D008344 1.9e-15 86.3 83 48.2
MSTRG.10056 Avicennia marina HOM05D006775 ORTHO05D008344 3.2e-15 85.5 79 51.9
Lj4g0016853 Lotus japonicus HOM05D006775 ORTHO05D008344 3.2e-15 85.5 100 45.0
Potri.008G204800 Populus trichocarpa HOM05D006775 ORTHO05D008344 3.2e-15 85.5 85 49.4
Psat4g030400 Pisum sativum HOM05D006775 ORTHO05D008344 4.2e-15 85.1 89 49.4
TPR.G14956 Trifolium pratense HOM05D006775 ORTHO05D008344 4.2e-15 85.1 100 45.0
Psat4g030480 Pisum sativum HOM05D006775 ORTHO05D008344 9.4e-15 84.0 89 47.2
Ah.13g074540 Amaranthus hybridus HOM05D006196 ORTHO05D007758 2.7e-14 82.4 84 50.0
Rhsim12G0090200 Rhododendron simsii HOM05D006775 ORTHO05D008344 3.6e-14 82.0 71 50.7
unitig_32.g10786 Utricularia gibba HOM05D006775 ORTHO05D008344 1.0e-13 80.5 69 52.2
Sabra08G0157200 Salix brachista HOM05D006775 ORTHO05D008344 6.8e-13 77.8 85 44.7
THA.LOC104820238 Tarenaya hassleriana HOM05D006775 ORTHO05D008344 3.4e-12 75.5 82 48.8
RcHm_v2.0_Chr6g0302841 Rosa chinensis HOM05D006775 ORTHO05D008344 5.7e-12 74.7 87 41.4
HPP92_025211 Vanilla planifolia HOM05D006775 ORTHO05D008344 7.5e-12 74.3 88 40.9
Aa31LG9G1860 Aethionema arabicum HOM05D006775 ORTHO05D008344 9.8e-12 73.9 84 45.2
HPP92_025229 Vanilla planifolia HOM05D006775 ORTHO05D008344 9.8e-12 73.9 88 40.9
HPP92_025275 Vanilla planifolia HOM05D006775 ORTHO05D008344 9.8e-12 73.9 76 43.4
A01p21970 Brassica napus HOM05D006775 ORTHO05D008344 1.3e-11 73.6 84 45.2
BraA01t02103Z Brassica rapa HOM05D006775 ORTHO05D008344 1.3e-11 73.6 84 45.2
BcaNung00261 Brassica carinata HOM05D006775 ORTHO05D008344 2.2e-11 72.8 84 45.2
ATR0706G197 Amborella trichopoda HOM05D006775 ORTHO05D008344 2.8e-11 72.4 94 35.1
Ca_21549_v3 Cicer arietinum L. HOM05D006775 ORTHO05D008344 3.7e-11 72.0 91 44.0
AL7G39920 Arabidopsis lyrata HOM05D006775 ORTHO05D008344 6.3e-11 71.2 87 44.8
BcaC09g50254 Brassica carinata HOM05D001154 ORTHO05D001175 6.3e-11 71.2 84 44.0
C01p27330 Brassica napus HOM05D006775 ORTHO05D008344 6.3e-11 71.2 84 44.0
BolC1t02676H Brassica oleracea HOM05D006775 ORTHO05D008344 6.3e-11 71.2 84 44.0
Carub.0007s2625 Capsella rubella HOM05D006775 ORTHO05D008344 1.1e-10 70.5 87 44.8
CARHR289990 Cardamine hirsuta HOM05D006775 ORTHO05D008344 1.8e-10 69.7 87 42.5
Thhalv10026419m.g Eutrema salsugineum HOM05D006775 ORTHO05D008344 2.4e-10 69.3 84 44.0
Os05g0372800 Oryza sativa ssp. japonica HOM05D006775 ORTHO05D008344 2.4e-10 69.3 72 40.3
Eucgr.A01819 Eucalyptus grandis HOM05D006775 ORTHO05D008344 5.4e-10 68.2 59 52.5
AT4G15563 Arabidopsis thaliana HOM05D006775 ORTHO05D008344 2.7e-09 65.9 76 46.1
Zm00001eb285420 Zea mays HOM05D006775 ORTHO05D008344 7.7e-09 64.3 72 40.3
FAN20G0357 Fragaria x ananassa HOM05D006775 ORTHO05D008344 1.3e-08 63.5 77 37.7
FvH4_2g38460 Fragaria vesca HOM05D006775 ORTHO05D008344 5.0e-08 61.6 98 32.7
Gohir.A09G233400 Gossypium hirsutum HOM05D006775 ORTHO05D008344 5.0e-08 61.6 82 41.5
Gorai.006G257400 Gossypium raimondii HOM05D006775 ORTHO05D008344 3.2e-07 58.9 82 40.2
Sp7g13860 Schrenkiella parvula HOM05D006775 ORTHO05D008344 5.5e-07 58.2 71 45.1
Oeu052260.1 Olea europaea HOM05D006775 ORTHO05D008344 7.2e-07 57.8 85 40.0
Pp3c2_550 Physcomitrium patens HOM05D006775 ORTHO05D008344 6.1e-06 54.7 84 32.1


User provided reference genes

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