Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G00469 Aquilegia oxysepala HOM05D008199 ORTHO05D010334 4.6e-24 113.6 53 100.0
C04p08150 Brassica napus HOM05D008199 ORTHO05D010334 5.4e-17 90.1 48 79.2
BolC4t22425H Brassica oleracea HOM05D008199 ORTHO05D010334 5.4e-17 90.1 48 79.2
BcaC02g12078 Brassica carinata HOM05D008199 ORTHO05D010334 2.1e-16 88.2 48 77.1
A05p06880 Brassica napus HOM05D008199 ORTHO05D010334 2.1e-16 88.2 48 77.1
BraA05t19653Z Brassica rapa HOM05D008199 ORTHO05D010334 2.1e-16 88.2 48 77.1
Carub.0004s2158 Capsella rubella HOM05D008199 ORTHO05D010334 4.6e-16 87.0 47 78.7
AL4G36900 Arabidopsis lyrata HOM05D008199 ORTHO05D010334 6.0e-16 86.7 48 75.0
AL4G36920 Arabidopsis lyrata HOM05D008199 ORTHO05D010334 6.0e-16 86.7 48 75.0
CANSAT11G0099 Cannabis sativa HOM05D008199 ORTHO05D010334 6.0e-16 86.7 51 76.5
Dinv31422 Davidia involucrata HOM05D000953 ORTHO05D000231 7.9e-16 86.3 51 74.5
Aa31LG5G20100 Aethionema arabicum HOM05D008199 ORTHO05D010334 1.0e-15 85.9 51 70.6
AT2G39500 Arabidopsis thaliana HOM05D008199 ORTHO05D010334 1.0e-15 85.9 48 72.9
Nn2g10469 Nelumbo nucifera HOM05D008199 ORTHO05D010334 1.0e-15 85.9 48 79.2
Hma1.2p1_0727F.1_g209100 Hydrangea macrophylla HOM05D008199 ORTHO05D010334 1.8e-15 85.1 48 75.0
TWI38G1458 Tripterygium wilfordii HOM05D008199 ORTHO05D010334 1.8e-15 85.1 48 77.1
ClCG09G020150 Citrullus lanatus HOM05D008199 ORTHO05D010334 5.1e-15 83.6 49 75.5
CARHR134390 Cardamine hirsuta HOM05D008199 ORTHO05D010334 6.7e-15 83.2 48 70.8
CiPaw.01G282700 Carya illinoinensis HOM05D008199 ORTHO05D010334 6.7e-15 83.2 46 78.3
PSO339G4122 Papaver somniferum HOM05D008199 ORTHO05D010334 8.7e-15 82.8 47 76.6
Potri.008G051100 Populus trichocarpa HOM05D008199 ORTHO05D010334 8.7e-15 82.8 49 73.5
Atru.chr12.520 Acer truncatum HOM05D008199 ORTHO05D010334 1.5e-14 82.0 53 75.5
Cpa.g.sc1.358 Carica papaya HOM05D008199 ORTHO05D010334 1.5e-14 82.0 49 75.5
Cfa001517 Carpinus fangiana HOM05D008199 ORTHO05D010334 1.5e-14 82.0 53 69.8
Sp4g21800 Schrenkiella parvula HOM05D008199 ORTHO05D010334 1.5e-14 82.0 48 70.8
GSVIVG01016602001 Vitis vinifera HOM05D000953 ORTHO05D000231 1.5e-14 82.0 49 69.4
CSS0014372 Camellia sinensis var. sinensis HOM05D008199 ORTHO05D010334 1.9e-14 81.6 48 72.9
THA.LOC104824262 Tarenaya hassleriana HOM05D008199 ORTHO05D010334 1.9e-14 81.6 45 75.6
ECA238G2613 Erigeron canadensis HOM05D008199 ORTHO05D010334 2.5e-14 81.3 49 71.4
Gohir.D04G061900 Gossypium hirsutum HOM05D008199 ORTHO05D010334 2.5e-14 81.3 48 72.9
Gorai.012G069200 Gossypium raimondii HOM05D008199 ORTHO05D010334 2.5e-14 81.3 48 72.9
Lj5g0016979 Lotus japonicus HOM05D008199 ORTHO05D010334 3.3e-14 80.9 49 71.4
Sed0003138 Sechium edule HOM05D008199 ORTHO05D010334 3.3e-14 80.9 47 74.5
TAR633G0052 Trochodendron aralioides HOM05D008199 ORTHO05D010334 4.3e-14 80.5 49 67.3
Manes.07G111800 Manihot esculenta HOM05D008199 ORTHO05D010334 5.6e-14 80.1 46 76.1
Actinidia02971 Actinidia chinensis HOM05D008199 ORTHO05D010334 9.6e-14 79.3 48 72.9
Glyma.20G099000 Glycine max HOM05D008199 ORTHO05D010334 9.6e-14 79.3 46 73.9
Lsat_1_v5_gn_2_117560 Lactuca sativa HOM05D008199 ORTHO05D010334 9.6e-14 79.3 45 75.6
Sc20g0002530 Simmondsia chinensis HOM05D008199 ORTHO05D010334 9.6e-14 79.3 49 69.4
Gohir.A05G350700 Gossypium hirsutum HOM05D008199 ORTHO05D010334 1.3e-13 79.0 46 73.9
MD01G1123400 Malus domestica HOM05D008199 ORTHO05D010334 1.6e-13 78.6 47 72.3
RcHm_v2.0_Chr1g0366131 Rosa chinensis HOM05D008199 ORTHO05D010334 1.6e-13 78.6 49 69.4
Lalb_Chr02g0144051 Lupinus albus HOM05D008199 ORTHO05D010334 2.1e-13 78.2 50 68.0
Medtr1g115355 Medicago truncatula HOM05D008199 ORTHO05D010334 2.1e-13 78.2 48 70.8
PGR142G1326 Punica granatum HOM05D008199 ORTHO05D010334 2.1e-13 78.2 49 67.3
DCAR_027672 Daucus carota HOM05D008199 ORTHO05D010334 4.8e-13 77.0 47 70.2
Prupe.2G230900 Prunus persica HOM05D008199 ORTHO05D010334 4.8e-13 77.0 49 67.3
Migut.F01496 Erythranthe guttata HOM05D008199 ORTHO05D010334 6.2e-13 76.6 51 66.7
COL.COLO4_14948 Corchorus olitorius HOM05D008199 ORTHO05D010334 1.1e-12 75.9 47 66.0
PGSC0003DMG400029465 Solanum tuberosum HOM05D008199 ORTHO05D010334 1.8e-12 75.1 50 64.0
Actinidia07733 Actinidia chinensis HOM05D008199 ORTHO05D010334 3.1e-12 74.3 45 71.1
Actinidia34336 Actinidia chinensis HOM05D008199 ORTHO05D010334 3.1e-12 74.3 45 71.1
Phvul.007G011200 Phaseolus vulgaris HOM05D008199 ORTHO05D010334 4.0e-12 73.9 43 72.1
Psat6g236360 Pisum sativum HOM05D008199 ORTHO05D010334 5.3e-12 73.6 42 76.2
Thecc.10G048500 Theobroma cacao HOM05D008199 ORTHO05D010334 6.9e-12 73.2 52 63.5
Oeu021440.1 Olea europaea HOM05D008199 ORTHO05D010334 9.0e-12 72.8 47 66.0
CAN.G74.25 Capsicum annuum HOM05D008199 ORTHO05D010334 1.5e-11 72.0 46 67.4
Manes.10G036000 Manihot esculenta HOM05D008199 ORTHO05D010334 3.4e-11 70.9 45 64.4
Zm00001eb362160 Zea mays HOM05D008199 ORTHO05D010334 3.4e-11 70.9 47 63.8
SEGI_29944 Sequoiadendron giganteum HOM05D008199 ORTHO05D010334 9.9e-11 69.3 47 68.1
Ciclev10033682m.g Citrus clementina HOM05D008199 ORTHO05D010334 1.7e-10 68.6 39 76.9
MBI05_g35603_MAGBIO Magnolia biondii HOM05D008199 ORTHO05D010334 1.9e-09 65.1 41 63.4
Duzib128G0439 Durio zibethinus HOM05D008199 ORTHO05D010334 7.1e-09 63.2 41 65.9
SHI12594 Sapria himalayana HOM05D008199 ORTHO05D010334 1.6e-08 62.0 74 40.5
Pp3c9_50 Physcomitrium patens HOM05D008199 ORTHO05D010334 1.9e-06 55.1 38 57.9
HanXRQChr16g0507891 Helianthus annuus HOM05D008199 ORTHO05D010334 5.6e-06 53.5 51 49.0


User provided reference genes

Program Settings