Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy1G01533 Aquilegia oxysepala HOM05D000384 ORTHO05D006260 1.4e-70 269.6 145 100.0
Aqoxy5G00465 Aquilegia oxysepala HOM05D000384 ORTHO05D006260 1.4e-70 269.6 145 100.0
Nn3g18529 Nelumbo nucifera HOM05D000384 ORTHO05D006260 5.2e-62 241.1 146 87.0
GSVIVG01017982001 Vitis vinifera HOM05D000384 ORTHO05D006260 1.1e-59 233.4 140 86.4
arahy.Tifrunner.gnm1.ann1.JHWM2T Arachis hypogaea HOM05D000384 ORTHO05D006260 9.2e-59 230.3 142 85.2
arahy.Tifrunner.gnm1.ann1.U3DZXE Arachis hypogaea HOM05D000384 ORTHO05D006260 9.2e-59 230.3 142 85.2
arahy.Tifrunner.gnm1.ann1.K8JXLT Arachis hypogaea HOM05D000384 ORTHO05D006260 1.2e-58 229.9 138 87.0
Nitab4.5_0007474g0030 Nicotiana tabacum HOM05D000384 ORTHO05D006260 1.6e-58 229.6 145 80.0
arahy.Tifrunner.gnm1.ann1.T2NEZJ Arachis hypogaea HOM05D000384 ORTHO05D006260 3.5e-58 228.4 139 85.6
MBI11_g07539_MAGBIO Magnolia biondii HOM05D000384 ORTHO05D006260 3.5e-58 228.4 140 84.3
Nitab4.5_0007368g0020 Nicotiana tabacum HOM05D000384 ORTHO05D006260 3.5e-58 228.4 145 80.0
PGSC0003DMG400016332 Solanum tuberosum HOM05D000384 ORTHO05D006260 4.6e-58 228.0 145 79.3
Peaxi162Scf00579g00001 Petunia axillaris HOM05D000384 ORTHO05D006260 1.0e-57 226.9 145 79.3
Lalb_Chr19g0132471 Lupinus albus HOM05D000384 ORTHO05D006260 1.3e-57 226.5 143 81.8
TAR636G3061 Trochodendron aralioides HOM05D000384 ORTHO05D006260 2.3e-57 225.7 140 83.6
Duzib128G1753 Durio zibethinus HOM05D000384 ORTHO05D006260 5.1e-57 224.6 140 81.4
Thecc.10G059100 Theobroma cacao HOM05D000384 ORTHO05D006260 5.1e-57 224.6 140 82.9
Potri.008G153900 Populus trichocarpa HOM05D000384 ORTHO05D006260 6.6e-57 224.2 143 81.1
COL.COLO4_10907 Corchorus olitorius HOM05D000384 ORTHO05D006260 1.1e-56 223.4 143 80.4
Sopen06g018540 Solanum pennellii HOM05D000384 ORTHO05D006260 1.1e-56 223.4 145 79.3
Actinidia40142 Actinidia chinensis HOM05D000384 ORTHO05D006260 2.5e-56 222.2 142 81.0
Duzib114G0643 Durio zibethinus HOM05D000384 ORTHO05D006260 2.5e-56 222.2 140 80.7
Oeu031225.1 Olea europaea HOM05D000384 ORTHO05D006260 2.5e-56 222.2 140 80.7
Oeu031229.1 Olea europaea HOM05D000384 ORTHO05D006260 2.5e-56 222.2 140 80.7
RcHm_v2.0_Chr1g0362551 Rosa chinensis HOM05D000384 ORTHO05D006260 2.5e-56 222.2 144 80.6
RcHm_v2.0_Chr4g0387021 Rosa chinensis HOM05D000384 ORTHO05D006260 2.5e-56 222.2 144 80.6
Atru.chr4.720 Acer truncatum HOM05D000384 ORTHO05D006260 3.3e-56 221.9 149 79.2
Glyma.06G316000 Glycine max HOM05D000384 ORTHO05D006260 3.3e-56 221.9 140 82.9
Atru.chr4.2459 Acer truncatum HOM05D000384 ORTHO05D006260 4.3e-56 221.5 147 80.3
CAN.G1280.23 Capsicum annuum HOM05D000384 ORTHO05D006260 4.3e-56 221.5 141 80.9
Cpa.g.sc58.101 Carica papaya HOM05D000384 ORTHO05D006260 4.3e-56 221.5 142 80.3
Glyma.13G124100 Glycine max HOM05D000384 ORTHO05D006260 4.3e-56 221.5 140 82.1
CiPaw.02G097700 Carya illinoinensis HOM05D000384 ORTHO05D006260 5.6e-56 221.1 139 83.5
Eucgr.H03463 Eucalyptus grandis HOM05D000384 ORTHO05D006260 5.6e-56 221.1 135 85.2
FAN07G0857 Fragaria x ananassa HOM05D000384 ORTHO05D006260 5.6e-56 221.1 144 79.9
EL10Ac4g08427 Beta vulgaris HOM05D000384 ORTHO05D006260 9.5e-56 220.3 142 78.9
Lj3E734T1 Lonicera japonica HOM05D000384 ORTHO05D006260 9.5e-56 220.3 145 80.7
Phvul.008G161600 Phaseolus vulgaris HOM05D000384 ORTHO05D006260 9.5e-56 220.3 140 80.7
QL06p002227 Quercus lobata HOM05D000384 ORTHO05D006260 9.5e-56 220.3 141 79.4
VMungo0720G1921 Vigna mungo HOM05D000384 ORTHO05D006260 9.5e-56 220.3 135 82.2
Haze_00893 Corylus avellana HOM05D000384 ORTHO05D006260 1.2e-55 219.9 140 82.1
Manes.03G178300 Manihot esculenta HOM05D000384 ORTHO05D006260 1.2e-55 219.9 135 81.5
PGR004G2612 Punica granatum HOM05D000384 ORTHO05D006260 1.2e-55 219.9 140 80.0
Glyma.05G087300 Glycine max HOM05D000384 ORTHO05D006260 1.6e-55 219.5 140 81.4
Sc19g0004110 Simmondsia chinensis HOM05D000384 ORTHO05D006260 1.6e-55 219.5 142 78.2
Cfa015651 Carpinus fangiana HOM05D000384 ORTHO05D006260 2.1e-55 219.2 141 83.0
Ca_14031_v3 Cicer arietinum L. HOM05D000384 ORTHO05D006260 2.1e-55 219.2 140 81.4
CANSAT64G0565 Cannabis sativa HOM05D000384 ORTHO05D006260 2.8e-55 218.8 141 81.6
Lj3g0015206 Lotus japonicus HOM05D000384 ORTHO05D006260 3.6e-55 218.4 141 80.9
PSO210G4801 Papaver somniferum HOM05D000384 ORTHO05D006260 3.6e-55 218.4 137 81.8
Sc13g0004430 Simmondsia chinensis HOM05D000384 ORTHO05D006260 3.6e-55 218.4 138 79.7
Gohir.A10G210600 Gossypium hirsutum HOM05D000384 ORTHO05D006260 4.7e-55 218.0 143 78.3
PSO832G3877 Papaver somniferum HOM05D000384 ORTHO05D006260 4.7e-55 218.0 137 81.8
CAN.G136.5 Capsicum annuum HOM05D000384 ORTHO05D006260 6.2e-55 217.6 145 77.2
Gohir.D10G218900 Gossypium hirsutum HOM05D000384 ORTHO05D006260 6.2e-55 217.6 143 78.3
Gorai.011G245600 Gossypium raimondii HOM05D000384 ORTHO05D006260 6.2e-55 217.6 143 78.3
Os12g0485800 Oryza sativa ssp. japonica HOM05D000384 ORTHO05D006260 6.2e-55 217.6 136 81.6
MSTRG.24739 Avicennia marina HOM05D000384 ORTHO05D006260 8.1e-55 217.2 141 78.0
FvH4_4g15650 Fragaria vesca HOM05D000384 ORTHO05D006260 8.1e-55 217.2 144 79.2
FAN12G1863 Fragaria x ananassa HOM05D000384 ORTHO05D006260 8.1e-55 217.2 144 79.2
FAN17G0123 Fragaria x ananassa HOM05D000384 ORTHO05D006260 8.1e-55 217.2 144 78.5
RcHm_v2.0_Chr4g0416141 Rosa chinensis HOM05D000384 ORTHO05D006260 8.1e-55 217.2 144 79.2
Sabra08G0117400 Salix brachista HOM05D000384 ORTHO05D006260 1.1e-54 216.9 138 79.7
TWI09G1519 Tripterygium wilfordii HOM05D000384 ORTHO05D006260 1.1e-54 216.9 142 76.1
CSS0003915 Camellia sinensis var. sinensis HOM05D000384 ORTHO05D006260 1.4e-54 216.5 143 79.0
CSS0025710 Camellia sinensis var. sinensis HOM05D000384 ORTHO05D006260 1.4e-54 216.5 143 79.0
Dinv44537 Davidia involucrata HOM05D000384 ORTHO05D000468 1.4e-54 216.5 135 81.5
Cc03_g03830 Coffea canephora HOM05D000384 ORTHO05D006260 1.8e-54 216.1 139 81.3
CSS0048526 Camellia sinensis var. sinensis HOM05D000384 ORTHO05D006260 2.4e-54 215.7 143 78.3
CiPaw.01G166600 Carya illinoinensis HOM05D000384 ORTHO05D006260 2.4e-54 215.7 139 81.3
AUR62013951 Chenopodium quinoa HOM05D000384 ORTHO05D006260 2.4e-54 215.7 142 78.2
AUR62019660 Chenopodium quinoa HOM05D000384 ORTHO05D006260 2.4e-54 215.7 142 78.2
FAN22G1586 Fragaria x ananassa HOM05D000384 ORTHO05D006260 2.4e-54 215.7 144 77.8
Psat0s3755g0120 Pisum sativum HOM05D000384 ORTHO05D006260 3.1e-54 215.3 140 79.3
TPR.G25531 Trifolium pratense HOM05D000384 ORTHO05D006260 3.1e-54 215.3 148 77.0
TWI53G0398 Tripterygium wilfordii HOM05D000384 ORTHO05D006260 3.1e-54 215.3 138 79.7
Ciclev10006154m.g Citrus clementina HOM05D000384 ORTHO05D006260 4.0e-54 214.9 143 76.9
SGA_v2.0_scaffold522G52709 Striga asiatica HOM05D000384 ORTHO05D006260 4.0e-54 214.9 141 79.4
ClCG05G005160 Citrullus lanatus HOM05D000384 ORTHO05D006260 6.8e-54 214.2 139 79.9
Medtr3g007250 Medicago truncatula HOM05D000384 ORTHO05D006260 6.8e-54 214.2 148 76.4
CsaV3_5G038350 Cucumis sativus L. HOM05D000384 ORTHO05D006260 8.9e-54 213.8 139 79.9
Hma1.2p1_0745F.1_g212050 Hydrangea macrophylla HOM05D000384 ORTHO05D006260 8.9e-54 213.8 137 79.6
Potri.001G240200 Populus trichocarpa HOM05D000384 ORTHO05D006260 8.9e-54 213.8 143 76.9
Hund25029 Selenicereus undatus HOM05D000384 ORTHO05D006260 2.0e-53 212.6 142 77.5
Migut.N00188 Erythranthe guttata HOM05D000384 ORTHO05D006260 4.4e-53 211.5 139 75.5
MD16G1194400 Malus domestica HOM05D000384 ORTHO05D006260 4.4e-53 211.5 135 81.5
DCAR_027219 Daucus carota HOM05D000384 ORTHO05D006260 5.8e-53 211.1 144 77.8
DCAR_024164 Daucus carota HOM05D000384 ORTHO05D006260 7.6e-53 210.7 144 77.8
Prupe.1G014300 Prunus persica HOM05D000384 ORTHO05D006260 9.9e-53 210.3 140 78.6
MELO3C022017.2 Cucumis melo HOM05D000384 ORTHO05D006260 1.3e-52 209.9 139 79.1
Zm00001eb114150 Zea mays HOM05D000384 ORTHO05D006260 1.3e-52 209.9 135 78.5
Rhsim04G0201900 Rhododendron simsii HOM05D000384 ORTHO05D006260 2.2e-52 209.1 143 75.5
Sed0018578 Sechium edule HOM05D000384 ORTHO05D006260 2.2e-52 209.1 138 78.3
Zm00001eb415970 Zea mays HOM05D000384 ORTHO05D006260 4.9e-52 208.0 135 77.0
Sabra16G0144900 Salix brachista HOM05D000384 ORTHO05D006260 8.4e-52 207.2 143 74.1
SalBow3G1001 Salvia bowleyana HOM05D000384 ORTHO05D006260 8.4e-52 207.2 135 78.5
Lsat_1_v5_gn_9_18461 Lactuca sativa HOM05D000384 ORTHO05D006260 1.9e-51 206.1 135 78.5
SEGI_35673 Sequoiadendron giganteum HOM05D000384 ORTHO05D006260 2.4e-51 205.7 139 74.8
ECA247G4089 Erigeron canadensis HOM05D000384 ORTHO05D006260 3.2e-51 205.3 139 75.5
HanXRQChr08g0229211 Helianthus annuus HOM05D000384 ORTHO05D006260 4.1e-51 204.9 139 75.5
unitig_699.g19994 Utricularia gibba HOM05D000384 ORTHO05D006260 7.1e-51 204.1 140 74.3
THA.LOC104803028 Tarenaya hassleriana HOM05D000384 ORTHO05D006260 4.6e-50 201.4 143 71.3
Oeu050282.1 Olea europaea HOM05D000384 ORTHO05D006260 3.9e-49 198.4 140 73.6
THA.LOC104822267 Tarenaya hassleriana HOM05D000384 ORTHO05D006260 3.9e-49 198.4 143 71.3
Os11g0568500 Oryza sativa ssp. japonica HOM05D000384 ORTHO05D006260 5.1e-49 198.0 136 75.0
Solyc06g053460.3 Solanum lycopersicum HOM05D000384 ORTHO05D006260 1.5e-48 196.4 125 82.4
BcaC01g03444 Brassica carinata HOM05D000384 ORTHO05D006260 1.1e-46 190.3 140 69.3
CARHR098380 Cardamine hirsuta HOM05D000384 ORTHO05D006260 1.1e-46 190.3 140 71.4
C03p52530 Brassica napus HOM05D000384 ORTHO05D006260 1.8e-46 189.5 140 69.3
Aa31LG8G9040 Aethionema arabicum HOM05D000384 ORTHO05D006260 2.4e-46 189.1 143 68.5
BolC3t17522H Brassica oleracea HOM05D000384 ORTHO05D006260 5.2e-46 188.0 140 68.6
BraA03t13424Z Brassica rapa HOM05D000384 ORTHO05D006260 6.9e-46 187.6 141 69.5
A03p42770 Brassica napus HOM05D000384 ORTHO05D006260 1.2e-45 186.8 142 69.0
BcaB04g19201 Brassica carinata HOM05D000384 ORTHO05D006260 2.0e-45 186.0 137 67.2
BcaB06g26358 Brassica carinata HOM05D000384 ORTHO05D006260 2.0e-45 186.0 134 69.4
Thhalv10021707m.g Eutrema salsugineum HOM05D000384 ORTHO05D006260 2.0e-45 186.0 144 67.4
BcaC05g28063 Brassica carinata HOM05D000384 ORTHO05D006260 5.8e-45 184.5 137 69.3
C05p40760 Brassica napus HOM05D000384 ORTHO05D006260 5.8e-45 184.5 137 69.3
BolC5t32821H Brassica oleracea HOM05D000384 ORTHO05D006260 5.8e-45 184.5 137 69.3
ATR0083G069 Amborella trichopoda HOM05D000384 ORTHO05D006260 7.6e-45 184.1 140 66.4
HanXRQChr04g0103741 Helianthus annuus HOM05D000384 ORTHO05D006260 2.9e-44 182.2 117 78.6
TAR365G0396 Trochodendron aralioides HOM05D000384 ORTHO05D006260 2.9e-44 182.2 120 82.5
A05p26280 Brassica napus HOM05D000384 ORTHO05D006260 4.9e-44 181.4 140 65.7
AT3G22480 Arabidopsis thaliana HOM05D000384 ORTHO05D006260 1.1e-43 180.3 140 67.1
BraA05t21503Z Brassica rapa HOM05D000384 ORTHO05D006260 1.1e-43 180.3 137 66.4
Mapoly0049s0105 Marchantia polymorpha HOM05D000384 ORTHO05D006260 3.2e-43 178.7 135 67.4
Ah.04g163960 Amaranthus hybridus HOM05D000384 ORTHO05D006260 9.3e-43 177.2 138 68.1
C05p40680 Brassica napus HOM05D000384 ORTHO05D006260 4.6e-42 174.9 138 67.4
BolC5t32807H Brassica oleracea HOM05D000384 ORTHO05D006260 4.6e-42 174.9 138 67.4
Carub.0003s2264 Capsella rubella HOM05D000384 ORTHO05D006260 4.6e-42 174.9 140 67.1
AL3G36790 Arabidopsis lyrata HOM05D000384 ORTHO05D006260 1.0e-41 173.7 140 66.4
AagrBONN_evm.TU.Sc2ySwM_344.1360 Anthoceros agrestis HOM05D000384 ORTHO05D006260 5.1e-41 171.4 139 61.9
SMO169G0080 Selaginella moellendorffii HOM05D000384 ORTHO05D006260 5.1e-41 171.4 138 62.3
Sp3g20250 Schrenkiella parvula HOM05D000384 ORTHO05D006260 1.1e-38 163.7 140 62.9
CBR_g42063 Chara braunii HOM05D000384 ORTHO05D006260 1.2e-37 160.2 140 60.0
HPP92_018608 Vanilla planifolia HOM05D000384 ORTHO05D006260 6.7e-33 144.4 132 58.3
Pp3c23_10300 Physcomitrium patens HOM05D000384 ORTHO05D006260 1.9e-32 142.9 130 60.8
AagrBONN_evm.TU.Sc2ySwM_228.3583 Anthoceros agrestis HOM05D000384 ORTHO05D006260 1.3e-31 140.2 129 55.8
Pp3c24_3120 Physcomitrium patens HOM05D000384 ORTHO05D006260 4.5e-29 131.7 131 58.0
Hma1.2p1_0602F.1_g187390 Hydrangea macrophylla HOM05D000384 ORTHO05D006260 8.7e-25 117.5 109 59.6
HPP92_018610 Vanilla planifolia HOM05D000384 ORTHO05D006260 6.2e-23 111.3 85 69.4
MCO05G108 Micromonas commoda HOM05D000384 ORTHO05D006260 9.0e-22 107.5 130 41.5
BcaC05g28047 Brassica carinata HOM05D000384 ORTHO05D006260 1.5e-21 106.7 96 60.4
Cre07.g342250 Chlamydomonas reinhardtii HOM05D000384 ORTHO05D006260 7.1e-19 97.8 138 40.6
PRCOL_00004688 Prasinoderma coloniale HOM05D000384 ORTHO05D006260 1.2e-13 80.5 87 50.6
CDE09G0159 Ceratophyllum demersum HOM05D000384 ORTHO05D006260 7.7e-13 77.8 50 78.0


User provided reference genes

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