Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G00451 Aquilegia oxysepala HOM05D003566 ORTHO05D026742 1.4e-70 269.6 151 100.0
Aqoxy7G00661 Aquilegia oxysepala HOM05D003566 ORTHO05D005288 5.1e-52 208.0 119 99.2
TAR374G0275 Trochodendron aralioides HOM05D003566 ORTHO05D005288 4.1e-17 92.0 130 53.1
DCAR_008553 Daucus carota HOM05D003566 ORTHO05D005288 1.6e-16 90.1 167 42.5
Manes.01G266800 Manihot esculenta HOM05D003566 ORTHO05D005288 1.6e-16 90.1 130 50.0
Ciclev10019734m.g Citrus clementina HOM05D003566 ORTHO05D005288 3.5e-16 89.0 130 46.9
Dinv32368 Davidia involucrata HOM05D003566 ORTHO05D005288 3.5e-16 89.0 130 48.5
FAN01G1013 Fragaria x ananassa HOM05D003566 ORTHO05D005288 3.5e-16 89.0 131 51.1
Nn1g01139 Nelumbo nucifera HOM05D003566 ORTHO05D005288 4.5e-16 88.6 132 50.8
FAN06G2304 Fragaria x ananassa HOM05D003566 ORTHO05D005288 5.9e-16 88.2 131 51.1
FAN06G3189 Fragaria x ananassa HOM05D003566 ORTHO05D005288 5.9e-16 88.2 131 51.1
FAN10G1568 Fragaria x ananassa HOM05D003566 ORTHO05D005288 5.9e-16 88.2 131 51.1
FAN10G2501 Fragaria x ananassa HOM05D003566 ORTHO05D005288 5.9e-16 88.2 131 51.1
Manes.05G046900 Manihot esculenta HOM05D003566 ORTHO05D005288 5.9e-16 88.2 122 53.3
Prupe.2G143700 Prunus persica HOM05D003566 ORTHO05D005288 5.9e-16 88.2 131 49.6
CANSAT56G0647 Cannabis sativa HOM05D003566 ORTHO05D005288 7.7e-16 87.8 131 51.1
CANSAT56G3470 Cannabis sativa HOM05D003566 ORTHO05D005288 7.7e-16 87.8 131 51.1
Lalb_Chr12g0208181 Lupinus albus HOM05D003566 ORTHO05D005288 7.7e-16 87.8 136 50.0
RcHm_v2.0_Chr1g0349971 Rosa chinensis HOM05D003566 ORTHO05D005288 1.0e-15 87.4 131 51.1
Hma1.2p1_0301F.1_g118610 Hydrangea macrophylla HOM05D003566 ORTHO05D005288 1.3e-15 87.0 131 50.4
Lsat_1_v5_gn_7_9680 Lactuca sativa HOM05D003566 ORTHO05D005288 1.3e-15 87.0 129 51.9
Peaxi162Scf00959g00022 Petunia axillaris HOM05D003566 ORTHO05D005288 1.3e-15 87.0 130 53.1
Phvul.010G082200 Phaseolus vulgaris HOM05D003566 ORTHO05D005288 1.3e-15 87.0 144 46.5
QL08p052721 Quercus lobata HOM05D003566 ORTHO05D005288 1.3e-15 87.0 134 48.5
CsaV3_3G009780 Cucumis sativus L. HOM05D003566 ORTHO05D005288 1.7e-15 86.7 136 48.5
Lj9A568G56 Lonicera japonica HOM05D003566 ORTHO05D005288 1.7e-15 86.7 134 49.3
Lalb_Chr07g0189911 Lupinus albus HOM05D003566 ORTHO05D005288 1.7e-15 86.7 131 47.3
MELO3C006199.2 Cucumis melo HOM05D003566 ORTHO05D005288 2.2e-15 86.3 136 47.8
THA.LOC104817242 Tarenaya hassleriana HOM05D003566 ORTHO05D005288 2.2e-15 86.3 130 48.5
FAN03G0287 Fragaria x ananassa HOM05D003566 ORTHO05D005288 2.9e-15 85.9 131 50.4
Sopen05g029450 Solanum pennellii HOM05D003566 ORTHO05D005288 2.9e-15 85.9 130 53.8
PGSC0003DMG400026006 Solanum tuberosum HOM05D003566 ORTHO05D005288 2.9e-15 85.9 119 52.1
Sabra02G0114000 Salix brachista HOM05D003566 ORTHO05D005288 3.8e-15 85.5 133 48.9
ClCG05G002340 Citrullus lanatus HOM05D003566 ORTHO05D005288 8.5e-15 84.3 130 46.2
Oeu055501.1 Olea europaea HOM05D003566 ORTHO05D005288 1.1e-14 84.0 138 46.4
Solyc05g050980.3 Solanum lycopersicum HOM05D003566 ORTHO05D005288 1.1e-14 84.0 130 53.1
VMungo0331G1999 Vigna mungo HOM05D003566 ORTHO05D005288 1.5e-14 83.6 138 45.7
Ah.05g174400 Amaranthus hybridus HOM05D003566 ORTHO05D005288 4.2e-14 82.0 132 48.5
Duzib133G0428 Durio zibethinus HOM05D003566 ORTHO05D005288 4.2e-14 82.0 151 41.7
Duzib138G1849 Durio zibethinus HOM05D003566 ORTHO05D005288 4.2e-14 82.0 130 48.5
PSO782G1824 Papaver somniferum HOM05D003566 ORTHO05D005288 4.2e-14 82.0 133 51.1
PSO832G3659 Papaver somniferum HOM05D003566 ORTHO05D005288 4.2e-14 82.0 133 51.1
Duzib138G1163 Durio zibethinus HOM05D003566 ORTHO05D005288 7.2e-14 81.3 130 48.5
MD02G1207300 Malus domestica HOM05D003566 ORTHO05D005288 7.2e-14 81.3 131 45.0
Solyc01g091190.3 Solanum lycopersicum HOM05D003566 ORTHO05D005288 7.2e-14 81.3 120 51.7
Cpa.g.sc18.106 Carica papaya HOM05D003566 ORTHO05D005288 9.4e-14 80.9 133 48.1
Sabra14G0047900 Salix brachista HOM05D003566 ORTHO05D005288 9.4e-14 80.9 130 46.2
Glyma.03G027400 Glycine max HOM05D003566 ORTHO05D005288 1.2e-13 80.5 138 44.9
TWI59G0119 Tripterygium wilfordii HOM05D003566 ORTHO05D005288 1.2e-13 80.5 120 52.5
CiPaw.01G263300 Carya illinoinensis HOM05D003566 ORTHO05D005288 1.6e-13 80.1 133 48.9
Lj3g0026165 Lotus japonicus HOM05D003566 ORTHO05D005288 1.6e-13 80.1 131 48.9
PGSC0003DMG400007018 Solanum tuberosum HOM05D003566 ORTHO05D005288 1.6e-13 80.1 130 52.3
Sed0009137 Sechium edule HOM05D003566 ORTHO05D005288 2.1e-13 79.7 133 46.6
Gorai.001G174400 Gossypium raimondii HOM05D003566 ORTHO05D005288 2.7e-13 79.3 151 39.7
Nn4g26365 Nelumbo nucifera HOM05D034528 ORTHO05D026742 2.7e-13 79.3 127 51.2
Nitab4.5_0005272g0040 Nicotiana tabacum HOM05D003566 ORTHO05D005288 2.7e-13 79.3 120 51.7
Potri.002G146400 Populus trichocarpa HOM05D003566 ORTHO05D005288 2.7e-13 79.3 130 49.2
AUR62013650 Chenopodium quinoa HOM05D003566 ORTHO05D005288 4.7e-13 78.6 130 44.6
Sed0010249 Sechium edule HOM05D003566 ORTHO05D005288 4.7e-13 78.6 133 47.4
Aa31LG10G15010 Aethionema arabicum HOM05D003566 ORTHO05D005288 6.1e-13 78.2 129 45.0
CAN.G388.31 Capsicum annuum HOM05D003566 ORTHO05D005288 6.1e-13 78.2 123 50.4
Sopen01g036940 Solanum pennellii HOM05D003566 ORTHO05D005288 6.1e-13 78.2 120 50.8
AUR62004195 Chenopodium quinoa HOM05D003566 ORTHO05D005288 8.0e-13 77.8 130 45.4
Oeu011923.1 Olea europaea HOM05D003566 ORTHO05D005288 8.0e-13 77.8 138 43.5
Thecc.01G378400 Theobroma cacao HOM05D003566 ORTHO05D005288 8.0e-13 77.8 152 42.1
arahy.Tifrunner.gnm1.ann1.VTP8RR Arachis hypogaea HOM05D003566 ORTHO05D005288 1.0e-12 77.4 137 44.5
Gohir.A07G146300 Gossypium hirsutum HOM05D003566 ORTHO05D005288 1.0e-12 77.4 136 41.9
Gohir.A12G101500 Gossypium hirsutum HOM05D003566 ORTHO05D005288 1.0e-12 77.4 128 42.2
MD07G1119600 Malus domestica HOM05D003566 ORTHO05D005288 1.0e-12 77.4 131 45.8
Gohir.D07G152400 Gossypium hirsutum HOM05D003566 ORTHO05D005288 1.4e-12 77.0 152 40.8
arahy.Tifrunner.gnm1.ann1.9A4JNA Arachis hypogaea HOM05D003566 ORTHO05D005288 1.8e-12 76.6 137 46.7
COL.COLO4_12529 Corchorus olitorius HOM05D003566 ORTHO05D005288 1.8e-12 76.6 154 40.3
TWI14G0817 Tripterygium wilfordii HOM05D003566 ORTHO05D005288 1.8e-12 76.6 120 51.7
Gorai.008G113600 Gossypium raimondii HOM05D003566 ORTHO05D005288 2.3e-12 76.3 128 42.2
Nitab4.5_0000457g0110 Nicotiana tabacum HOM05D003566 ORTHO05D005288 2.3e-12 76.3 120 54.2
Nitab4.5_0001329g0120 Nicotiana tabacum HOM05D003566 ORTHO05D005288 2.3e-12 76.3 132 47.0
SGA_v2.0_scaffold153G36998 Striga asiatica HOM05D003566 ORTHO05D005288 2.3e-12 76.3 131 48.9
GSVIVG01027673001 Vitis vinifera HOM05D003566 ORTHO05D005288 2.3e-12 76.3 131 47.3
QL08p052732 Quercus lobata HOM05D003566 ORTHO05D005288 4.0e-12 75.5 65 69.2
vmacro21022 Vaccinium macrocarpon HOM05D003566 ORTHO05D005288 4.0e-12 75.5 134 50.0
Psat0s4330g0080 Pisum sativum HOM05D003566 ORTHO05D005288 5.2e-12 75.1 139 42.4
HPP92_020661 Vanilla planifolia HOM05D003566 ORTHO05D005288 5.2e-12 75.1 63 73.0
Glyma.01G139600 Glycine max HOM05D003566 ORTHO05D005288 6.7e-12 74.7 138 43.5
PGR004G2250 Punica granatum HOM05D003566 ORTHO05D005288 6.7e-12 74.7 135 45.9
Hund17028 Selenicereus undatus HOM05D003566 ORTHO05D005288 6.7e-12 74.7 130 43.1
TPR.G31328 Trifolium pratense HOM05D003566 ORTHO05D005288 6.7e-12 74.7 135 42.2
Cfa001747 Carpinus fangiana HOM05D003566 ORTHO05D005288 8.8e-12 74.3 131 43.5
Gohir.D12G104500 Gossypium hirsutum HOM05D003566 ORTHO05D005288 8.8e-12 74.3 128 41.4
Ca_19954_v3 Cicer arietinum L. HOM05D003566 ORTHO05D005288 1.2e-11 73.9 137 43.8
Medtr4g024620 Medicago truncatula HOM05D003566 ORTHO05D005288 1.2e-11 73.9 137 43.8
unitig_749.g14378 Utricularia gibba HOM05D003566 ORTHO05D005288 1.2e-11 73.9 75 62.7
unitig_76.g29084 Utricularia gibba HOM05D003566 ORTHO05D005288 1.2e-11 73.9 75 62.7
Cc02_g24040 Coffea canephora HOM05D003566 ORTHO05D005288 2.0e-11 73.2 44 90.9
Peaxi162Scf00013g03114 Petunia axillaris HOM05D003566 ORTHO05D005288 2.0e-11 73.2 119 47.9
CSS0046086 Camellia sinensis var. sinensis HOM05D003566 ORTHO05D005288 3.3e-11 72.4 174 39.7
CARHR171150 Cardamine hirsuta HOM05D003566 ORTHO05D005288 3.3e-11 72.4 130 44.6
Eucgr.D02465 Eucalyptus grandis HOM05D003566 ORTHO05D005288 3.3e-11 72.4 121 47.1
Nitab4.5_0003912g0050 Nicotiana tabacum HOM05D003566 ORTHO05D005288 3.3e-11 72.4 132 47.7
Thhalv10001404m.g Eutrema salsugineum HOM05D003566 ORTHO05D005288 7.5e-11 71.2 130 40.8
SGA_v2.0_scaffold95G28906 Striga asiatica HOM05D003566 ORTHO05D005288 7.5e-11 71.2 84 60.7
AT2G45300 Arabidopsis thaliana HOM05D003566 ORTHO05D005288 9.7e-11 70.9 132 41.7
Sc23g0003670 Simmondsia chinensis HOM05D003566 ORTHO05D005288 1.3e-10 70.5 130 43.8
vmacro13413 Vaccinium macrocarpon HOM05D003566 ORTHO05D005288 1.3e-10 70.5 132 48.5
Actinidia12680 Actinidia chinensis HOM05D003566 ORTHO05D005288 1.7e-10 70.1 63 68.3
MSTRG.17176 Avicennia marina HOM05D003566 ORTHO05D005288 1.7e-10 70.1 130 44.6
Migut.B01621 Erythranthe guttata HOM05D003566 ORTHO05D005288 1.7e-10 70.1 119 47.1
MSTRG.4899 Avicennia marina HOM05D003566 ORTHO05D005288 2.2e-10 69.7 136 50.0
ECA234G2802 Erigeron canadensis HOM05D003566 ORTHO05D007485 2.2e-10 69.7 71 62.0
Rhsim07G0028700 Rhododendron simsii HOM05D003566 ORTHO05D005288 2.8e-10 69.3 130 46.9
BcaB01g03274 Brassica carinata HOM05D003566 ORTHO05D005288 4.8e-10 68.6 130 38.5
Carub.0004s2793 Capsella rubella HOM05D003566 ORTHO05D005288 4.8e-10 68.6 130 40.0
GSVIVG01027670001 Vitis vinifera HOM05D003566 ORTHO05D005288 4.8e-10 68.6 88 56.8
Actinidia12250 Actinidia chinensis HOM05D003566 ORTHO05D005288 6.3e-10 68.2 118 48.3
C04p71450 Brassica napus HOM05D003566 ORTHO05D005288 6.3e-10 68.2 131 39.7
CARHR140500 Cardamine hirsuta HOM05D003566 ORTHO05D005288 8.2e-10 67.8 134 41.8
Sp5g02490 Schrenkiella parvula HOM05D003566 ORTHO05D005288 1.1e-09 67.4 131 42.7
A04p33720 Brassica napus HOM05D003566 ORTHO05D005288 1.8e-09 66.6 134 40.3
Sp4g27320 Schrenkiella parvula HOM05D003566 ORTHO05D005288 2.4e-09 66.2 130 42.3
AL4G44400 Arabidopsis lyrata HOM05D003566 ORTHO05D005288 3.1e-09 65.9 130 41.5
unitig_26.g8900 Utricularia gibba HOM05D003566 ORTHO05D005288 3.1e-09 65.9 62 66.1
CDE04G0743 Ceratophyllum demersum HOM05D003566 ORTHO05D005288 4.1e-09 65.5 122 42.6
BolC4t28653H Brassica oleracea HOM05D003566 ORTHO05D005288 7.0e-09 64.7 134 40.3
Lsat_1_v5_gn_4_43461 Lactuca sativa HOM05D003566 ORTHO05D005288 7.0e-09 64.7 117 45.3
CDE12G0626 Ceratophyllum demersum HOM05D003566 ORTHO05D005288 9.1e-09 64.3 130 42.3
BraA04t18834Z Brassica rapa HOM05D003566 ORTHO05D005288 1.2e-08 63.9 134 39.6
HanXRQChr04g0122731 Helianthus annuus HOM05D003566 ORTHO05D005288 1.6e-08 63.5 100 56.0
Rhsim01G0149300 Rhododendron simsii HOM05D003566 ORTHO05D005288 1.6e-08 63.5 124 46.8
Actinidia31398 Actinidia chinensis HOM05D003566 ORTHO05D005288 3.5e-08 62.4 63 68.3
CBR_g26047 Chara braunii HOM05D003566 ORTHO05D005288 3.5e-08 62.4 50 68.0
BcaC01g05142 Brassica carinata HOM05D003566 ORTHO05D005288 4.5e-08 62.0 130 43.1
C03p30000 Brassica napus HOM05D003566 ORTHO05D005288 4.5e-08 62.0 130 43.1
BolC3t15347H Brassica oleracea HOM05D003566 ORTHO05D005288 4.5e-08 62.0 130 43.1
A03p25160 Brassica napus HOM05D003566 ORTHO05D005288 5.9e-08 61.6 132 39.4
AT1G48860 Arabidopsis thaliana HOM05D003566 ORTHO05D005288 7.7e-08 61.2 57 61.4
BraA03t11716Z Brassica rapa HOM05D003566 ORTHO05D005288 7.7e-08 61.2 132 40.9
HanXRQChr16g0520001 Helianthus annuus HOM05D003566 ORTHO05D005288 1.7e-07 60.1 117 46.2
Zm00001eb378020 Zea mays HOM05D003566 ORTHO05D005288 3.8e-07 58.9 45 75.6
AL1G55650 Arabidopsis lyrata HOM05D003566 ORTHO05D005288 5.0e-07 58.5 107 43.0
Atru.chr5.290 Acer truncatum HOM05D003566 ORTHO05D005288 6.5e-07 58.2 52 63.5
A05p05320 Brassica napus HOM05D003566 ORTHO05D003430 8.5e-07 57.8 35 82.9
BraA05t19501Z Brassica rapa HOM05D003075 ORTHO05D003430 8.5e-07 57.8 35 82.9
ATR0757G160 Amborella trichopoda HOM05D003566 ORTHO05D005288 1.1e-06 57.4 117 41.0
Pp3c23_11380 Physcomitrium patens HOM05D003566 ORTHO05D005288 1.1e-06 57.4 45 71.1
EL10Ac1g00874 Beta vulgaris HOM05D003566 ORTHO05D005288 1.5e-06 57.0 106 43.4
Os06g0133900 Oryza sativa ssp. japonica HOM05D003566 ORTHO05D005288 2.5e-06 56.2 49 65.3
Cre03.g181300 Chlamydomonas reinhardtii HOM05D003566 ORTHO05D005288 3.2e-06 55.8 46 63.0
AagrBONN_evm.TU.Sc2ySwM_117.2264 Anthoceros agrestis HOM05D003566 ORTHO05D005288 4.2e-06 55.5 57 56.1
PSO478G4413 Papaver somniferum HOM05D003566 ORTHO05D005288 4.2e-06 55.5 83 48.2
SMO137G0336 Selaginella moellendorffii HOM05D003566 ORTHO05D005288 4.2e-06 55.5 46 65.2


User provided reference genes

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