Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G00354 Aquilegia oxysepala HOM05D006082 ORTHO05D007616 9.4e-119 430.3 225 100.0
TAR375G0813 Trochodendron aralioides HOM05D006082 ORTHO05D007616 4.1e-74 282.0 225 64.4
Nn1g00467 Nelumbo nucifera HOM05D006082 ORTHO05D007616 5.6e-71 271.6 225 63.1
ATR1136G056 Amborella trichopoda HOM05D006082 ORTHO05D007616 3.3e-63 245.7 224 58.5
PSO675G6921 Papaver somniferum HOM05D006082 ORTHO05D007616 1.1e-61 240.7 228 59.6
GSVIVG01027464001 Vitis vinifera HOM05D006082 ORTHO05D007616 1.1e-61 240.7 224 55.8
PSO675G6409 Papaver somniferum HOM05D006082 ORTHO05D007616 1.4e-61 240.4 226 59.3
TWI14G1025 Tripterygium wilfordii HOM05D006082 ORTHO05D007616 2.4e-61 239.6 225 56.9
Gorai.007G114300 Gossypium raimondii HOM05D006082 ORTHO05D007616 9.0e-61 237.7 219 54.8
Potri.014G107300 Populus trichocarpa HOM05D006082 ORTHO05D007616 1.2e-60 237.3 223 56.5
Gohir.A11G102200 Gossypium hirsutum HOM05D006082 ORTHO05D007616 1.5e-60 236.9 219 55.3
QL01p017595 Quercus lobata HOM05D006082 ORTHO05D007616 2.0e-60 236.5 221 55.7
Actinidia33031 Actinidia chinensis HOM05D006082 ORTHO05D007616 4.4e-60 235.3 223 54.7
Duzib133G0864 Durio zibethinus HOM05D006082 ORTHO05D007616 4.4e-60 235.3 224 54.0
Ciclev10022037m.g Citrus clementina HOM05D006082 ORTHO05D007616 1.3e-59 233.8 219 56.6
HanXRQChr14g0454421 Helianthus annuus HOM05D006082 ORTHO05D007616 8.4e-59 231.1 225 53.3
TPR.G16094 Trifolium pratense HOM05D006082 ORTHO05D007616 4.2e-58 228.8 220 52.3
Dinv04258 Davidia involucrata HOM05D006082 ORTHO05D007616 9.3e-58 227.6 225 53.8
Glyma.03G126300 Glycine max HOM05D006082 ORTHO05D007616 9.3e-58 227.6 225 52.9
FvH4_7g17940 Fragaria vesca HOM05D006082 ORTHO05D007616 2.1e-57 226.5 223 53.8
MSTRG.15681 Avicennia marina HOM05D006082 ORTHO05D007616 2.7e-57 226.1 222 51.8
FAN06G3489 Fragaria x ananassa HOM05D006082 ORTHO05D007616 2.7e-57 226.1 223 53.4
Eucgr.G03261 Eucalyptus grandis HOM05D006082 ORTHO05D007616 4.6e-57 225.3 225 53.8
Sp1g01290 Schrenkiella parvula HOM05D006082 ORTHO05D007616 4.6e-57 225.3 224 53.1
Atru.chr5.795 Acer truncatum HOM05D006082 ORTHO05D007616 6.0e-57 224.9 219 53.0
Migut.L00265 Erythranthe guttata HOM05D006082 ORTHO05D007616 6.0e-57 224.9 222 52.3
MD01G1091900 Malus domestica HOM05D006082 ORTHO05D007616 6.0e-57 224.9 223 53.4
RcHm_v2.0_Chr1g0361381 Rosa chinensis HOM05D006082 ORTHO05D007616 6.0e-57 224.9 223 52.9
Phvul.001G121700 Phaseolus vulgaris HOM05D006082 ORTHO05D007616 1.3e-56 223.8 225 52.4
Thecc.01G331100 Theobroma cacao HOM05D006082 ORTHO05D007616 1.7e-56 223.4 219 53.9
Cc03_g11310 Coffea canephora HOM05D006082 ORTHO05D007616 2.3e-56 223.0 225 52.4
Haze_15761 Corylus avellana HOM05D006082 ORTHO05D007616 2.3e-56 223.0 225 52.9
Psat3g079600 Pisum sativum HOM05D006082 ORTHO05D007616 3.0e-56 222.6 219 50.7
Glyma.19G129400 Glycine max HOM05D006082 ORTHO05D007616 3.9e-56 222.2 225 52.4
BcaB03g13546 Brassica carinata HOM05D006082 ORTHO05D007616 5.1e-56 221.9 223 53.4
FAN03G2817 Fragaria x ananassa HOM05D006082 ORTHO05D007616 5.1e-56 221.9 233 51.5
Prupe.2G201100 Prunus persica HOM05D006082 ORTHO05D007616 8.7e-56 221.1 223 52.5
FAN06G1515 Fragaria x ananassa HOM05D006082 ORTHO05D007616 1.5e-55 220.3 229 52.0
Lalb_Chr17g0343121 Lupinus albus HOM05D006082 ORTHO05D007616 1.5e-55 220.3 226 51.3
Lj1g0004702 Lotus japonicus HOM05D006082 ORTHO05D007616 1.9e-55 219.9 220 50.9
ECA238G2330 Erigeron canadensis HOM05D006082 ORTHO05D007616 3.3e-55 219.2 220 50.9
CARHR001490 Cardamine hirsuta HOM05D006082 ORTHO05D007616 7.4e-55 218.0 223 52.5
BraA10t42369Z Brassica rapa HOM05D006082 ORTHO05D007616 2.1e-54 216.5 224 50.9
Medtr7g089460 Medicago truncatula HOM05D006082 ORTHO05D007616 2.1e-54 216.5 218 50.0
THA.LOC104815904 Tarenaya hassleriana HOM05D006082 ORTHO05D007616 2.8e-54 216.1 220 50.5
CDE08G0270 Ceratophyllum demersum HOM05D006082 ORTHO05D007616 3.6e-54 215.7 225 51.1
Thhalv10028930m.g Eutrema salsugineum HOM05D006082 ORTHO05D007616 3.6e-54 215.7 223 52.5
A10p00890 Brassica napus HOM05D006082 ORTHO05D007616 6.2e-54 214.9 224 51.3
PGSC0003DMG400016241 Solanum tuberosum HOM05D006082 ORTHO05D007616 6.2e-54 214.9 225 52.0
Carub.0001s0120 Capsella rubella HOM05D006082 ORTHO05D007616 8.1e-54 214.5 224 50.9
AL1G11510 Arabidopsis lyrata HOM05D006082 ORTHO05D007616 1.1e-53 214.2 218 53.2
CAN.G691.19 Capsicum annuum HOM05D006082 ORTHO05D007616 1.1e-53 214.2 225 51.6
Solyc11g008790.3 Solanum lycopersicum HOM05D006082 ORTHO05D007616 1.1e-53 214.2 225 52.0
Sopen11g004570 Solanum pennellii HOM05D006082 ORTHO05D007616 1.1e-53 214.2 225 52.0
HPP92_015681 Vanilla planifolia HOM05D006082 ORTHO05D007616 1.8e-53 213.4 223 51.1
AL6G51830 Arabidopsis lyrata HOM05D006082 ORTHO05D007616 2.4e-53 213.0 220 50.5
A09p01070 Brassica napus HOM05D006082 ORTHO05D007616 2.4e-53 213.0 223 52.5
C09p01160 Brassica napus HOM05D006082 ORTHO05D007616 2.4e-53 213.0 223 52.5
C05p00920 Brassica napus HOM05D006082 ORTHO05D007616 4.0e-53 212.2 223 50.2
arahy.Tifrunner.gnm1.ann1.6SRZ86 Arachis hypogaea HOM05D006082 ORTHO05D007616 5.3e-53 211.8 225 48.0
Carub.0006s3568 Capsella rubella HOM05D006082 ORTHO05D007616 5.3e-53 211.8 221 50.2
BolC5t28877H Brassica oleracea HOM05D006082 ORTHO05D007616 9.0e-53 211.1 224 49.6
arahy.Tifrunner.gnm1.ann1.9R6DDK Arachis hypogaea HOM05D006082 ORTHO05D007616 2.0e-52 209.9 225 48.0
Sp6g01450 Schrenkiella parvula HOM05D006082 ORTHO05D007616 2.6e-52 209.5 223 51.6
ClCG05G000050 Citrullus lanatus HOM05D006082 ORTHO05D007616 3.4e-52 209.1 236 48.7
PGR031G0479 Punica granatum HOM05D006082 ORTHO05D007616 3.4e-52 209.1 231 50.6
Thhalv10008618m.g Eutrema salsugineum HOM05D006082 ORTHO05D007616 4.5e-52 208.8 219 52.5
CARHR250170 Cardamine hirsuta HOM05D006082 ORTHO05D007616 5.8e-52 208.4 224 49.6
CsaV3_3G007110 Cucumis sativus L. HOM05D006082 ORTHO05D007616 7.6e-52 208.0 222 49.1
MELO3C005932.2 Cucumis melo HOM05D006082 ORTHO05D007616 2.9e-51 206.1 228 48.7
Ah.01g019340 Amaranthus hybridus HOM05D006082 ORTHO05D007616 1.4e-50 203.8 228 48.7
CANSAT56G1086 Cannabis sativa HOM05D006082 ORTHO05D007616 1.9e-50 203.4 210 53.8
AUR62016743 Chenopodium quinoa HOM05D006082 ORTHO05D007616 7.1e-50 201.4 228 48.7
FAN10G2982 Fragaria x ananassa HOM05D006082 ORTHO05D007616 7.1e-50 201.4 236 48.7
Aa31LG1G10340 Aethionema arabicum HOM05D006082 ORTHO05D007616 1.2e-49 200.7 228 50.0
Ca_08380_v3 Cicer arietinum L. HOM05D006082 ORTHO05D007616 1.6e-49 200.3 197 51.8
Os03g0784300 Oryza sativa ssp. japonica HOM05D006082 ORTHO05D007616 1.6e-49 200.3 223 50.2
BraA09t35778Z Brassica rapa HOM05D006082 ORTHO05D007616 7.9e-49 198.0 251 46.6
BolC9t53049H Brassica oleracea HOM05D006082 ORTHO05D007616 1.0e-48 197.6 252 46.4
Gohir.D11G106800 Gossypium hirsutum HOM05D006082 ORTHO05D007616 5.1e-48 195.3 217 47.9
SEGI_04405 Sequoiadendron giganteum HOM05D006082 ORTHO05D007616 9.6e-47 191.0 225 46.7
MBI06_g35217_MAGBIO Magnolia biondii HOM05D006082 ORTHO05D007616 4.0e-45 185.7 223 50.7
CANSAT56G0035 Cannabis sativa HOM05D006082 ORTHO05D007616 1.5e-44 183.7 208 51.9
Aa31LG5G1260 Aethionema arabicum HOM05D006082 ORTHO05D007616 3.4e-44 182.6 218 47.7
unitig_899.g14456 Utricularia gibba HOM05D003044 ORTHO05D007616 2.9e-43 179.5 198 50.0
AT4G01510 Arabidopsis thaliana HOM05D006082 ORTHO05D007616 6.5e-43 178.3 193 50.3
Manes.05G014900 Manihot esculenta HOM05D006082 ORTHO05D007616 7.1e-42 174.9 172 54.7
Lsat_1_v5_gn_2_88861 Lactuca sativa HOM05D006082 ORTHO05D007616 7.9e-41 171.4 201 51.2
Nitab4.5_0000743g0220 Nicotiana tabacum HOM05D006082 ORTHO05D007616 7.9e-41 171.4 231 44.2
vmacro11192 Vaccinium macrocarpon HOM05D006082 ORTHO05D007616 1.1e-39 167.5 313 38.7
FAN01G2730 Fragaria x ananassa HOM05D006082 ORTHO05D007616 7.4e-39 164.9 221 45.2
COL.COLO4_23067 Corchorus olitorius HOM05D006082 ORTHO05D007616 7.6e-36 154.8 143 53.1
Zm00001eb059810 Zea mays HOM05D006082 ORTHO05D007616 1.7e-35 153.7 197 44.2
Peaxi162Scf00090g00046 Petunia axillaris HOM05D006082 ORTHO05D007616 1.4e-34 150.6 253 39.5
C05p00960 Brassica napus HOM05D006082 ORTHO05D007616 7.2e-34 148.3 301 36.2
Pp3c10_9330 Physcomitrium patens HOM05D006082 ORTHO05D007616 1.6e-33 147.1 204 43.1
Sc24g0001860 Simmondsia chinensis HOM05D006082 ORTHO05D007616 2.7e-33 146.4 199 43.7
EL10Ac9g21719 Beta vulgaris HOM05D006082 ORTHO05D003517 6.1e-33 145.2 168 50.0
Potri.002G181700 Populus trichocarpa HOM05D006082 ORTHO05D007616 6.1e-33 145.2 222 39.2
CiPaw.01G087100 Carya illinoinensis HOM05D006082 ORTHO05D007616 7.9e-33 144.8 179 48.0
DCAR_014739 Daucus carota HOM05D006082 ORTHO05D007616 3.3e-31 139.4 222 38.7
BolC5t28880H Brassica oleracea HOM05D006082 ORTHO05D007616 9.7e-31 137.9 291 35.7
CSS0012451 Camellia sinensis var. sinensis HOM05D006082 ORTHO05D007616 3.7e-30 136.0 197 44.2
AT1G01020 Arabidopsis thaliana HOM05D006082 ORTHO05D007616 9.0e-29 131.3 180 43.3
SEGI_20928 Sequoiadendron giganteum HOM05D006082 ORTHO05D007616 2.0e-28 130.2 136 48.5
SMO367G0224 Selaginella moellendorffii HOM05D006082 ORTHO05D007616 1.3e-27 127.5 213 38.5
AagrBONN_evm.TU.Sc2ySwM_340.22 Anthoceros agrestis HOM05D006082 ORTHO05D007616 2.2e-27 126.7 214 39.3
Nitab4.5_0001677g0060 Nicotiana tabacum HOM05D006082 ORTHO05D007616 2.9e-27 126.3 281 35.6
Mapoly0050s0018 Marchantia polymorpha HOM05D006082 ORTHO05D007616 3.8e-27 125.9 225 34.2
Migut.L00585 Erythranthe guttata HOM05D006082 ORTHO05D007616 8.5e-27 124.8 90 61.1
Hma1.2p1_0451F.1_g155800 Hydrangea macrophylla HOM05D006082 ORTHO05D007616 3.6e-25 119.4 140 50.7
CBR_g1036 Chara braunii HOM05D006082 ORTHO05D007616 1.0e-24 117.9 230 34.3
Hma1.2p1_0262F.1_g105255 Hydrangea macrophylla HOM05D006082 ORTHO05D007616 1.4e-24 117.5 65 78.5
Hma1.2p1_0451F.1_g155790 Hydrangea macrophylla HOM05D006082 ORTHO05D007616 8.8e-24 114.8 63 79.4
GSVIVG01003191001 Vitis vinifera HOM05D006082 ORTHO05D007616 3.3e-23 112.8 132 47.0
arahy.Tifrunner.gnm1.ann1.PGF6M0 Arachis hypogaea HOM05D006082 ORTHO05D007616 1.8e-21 107.1 245 30.2
Sed0024729 Sechium edule HOM05D006082 ORTHO05D007616 5.3e-21 105.5 123 48.0
MD07G1162500 Malus domestica HOM05D006082 ORTHO05D007616 5.0e-19 99.0 144 41.7
BcaC05g24597 Brassica carinata HOM05D006082 ORTHO05D007616 3.0e-16 89.7 194 35.6
GSVIVG01003186001 Vitis vinifera HOM05D006082 ORTHO05D007616 1.1e-15 87.8 79 55.7
C05p00940 Brassica napus HOM05D006082 ORTHO05D007616 5.7e-15 85.5 115 42.6
QL03p043604 Quercus lobata HOM05D006082 ORTHO05D007616 1.4e-13 80.9 193 30.6
SMO230G0051 Selaginella moellendorffii HOM05D006082 ORTHO05D007616 2.1e-09 67.0 164 31.7
MD07G1162600 Malus domestica HOM05D006082 ORTHO05D007616 5.2e-08 62.4 58 56.9
Aqoxy4G01346 Aquilegia oxysepala HOM05D000214 ORTHO05D000131 1.1e-07 61.2 49 61.2
BcaC05g24595 Brassica carinata HOM05D006082 ORTHO05D007616 2.6e-07 60.1 81 48.1


User provided reference genes

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