Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G00349 Aquilegia oxysepala HOM05D014595 ORTHO05D010053 2.3e-40 168.3 78 100.0
Nn8g40013 Nelumbo nucifera HOM05D014595 ORTHO05D015167 1.5e-10 69.3 70 50.0
Sc25g0005050 Simmondsia chinensis HOM05D013903 ORTHO05D010053 3.6e-09 64.7 77 41.6
Migut.K00030 Erythranthe guttata HOM05D013903 ORTHO05D010053 4.7e-09 64.3 68 39.7
Nn3g17741 Nelumbo nucifera HOM05D014595 ORTHO05D015167 4.7e-09 64.3 68 44.1
Nn3g17736 Nelumbo nucifera HOM05D014595 ORTHO05D010053 6.2e-09 63.9 57 49.1
COL.COLO4_16008 Corchorus olitorius HOM05D009648 ORTHO05D012222 8.0e-09 63.5 83 38.6
Haze_20046 Corylus avellana HOM05D010058 ORTHO05D010053 1.0e-08 63.2 55 47.3
Potri.001G401800 Populus trichocarpa HOM05D013903 ORTHO05D010053 4.0e-08 61.2 75 41.3
Gohir.A01G012250 Gossypium hirsutum HOM05D010058 ORTHO05D010053 6.8e-08 60.5 72 44.4
Gohir.D01G011100 Gossypium hirsutum HOM05D010058 ORTHO05D010053 6.8e-08 60.5 72 41.7
Nn3g17735 Nelumbo nucifera HOM05D014595 ORTHO05D015167 8.9e-08 60.1 56 42.9
Nn1g09088 Nelumbo nucifera HOM05D014595 ORTHO05D015167 1.2e-07 59.7 68 42.6
Gohir.D01G011000 Gossypium hirsutum HOM05D010058 ORTHO05D010053 1.5e-07 59.3 72 41.7
CARHR182780 Cardamine hirsuta HOM05D010086 ORTHO05D010053 2.0e-07 58.9 68 41.2
CARHR183110 Cardamine hirsuta HOM05D010086 ORTHO05D010053 2.0e-07 58.9 68 41.2
Gohir.D01G011300 Gossypium hirsutum HOM05D010058 ORTHO05D010053 2.6e-07 58.5 72 40.3
Gorai.002G013200 Gossypium raimondii HOM05D010058 ORTHO05D010053 2.6e-07 58.5 72 40.3
Gohir.D01G011200 Gossypium hirsutum HOM05D010058 ORTHO05D010053 3.4e-07 58.2 72 40.3
GSVIVG01004335001 Vitis vinifera HOM05D013903 ORTHO05D010053 4.4e-07 57.8 72 38.9
Nn3g17740 Nelumbo nucifera HOM05D014595 ORTHO05D015167 5.8e-07 57.4 72 40.3
COL.COLO4_16002 Corchorus olitorius HOM05D010058 ORTHO05D010053 7.5e-07 57.0 78 38.5
Gohir.A01G011300 Gossypium hirsutum HOM05D010058 ORTHO05D010053 7.5e-07 57.0 72 41.7
Gorai.002G013100 Gossypium raimondii HOM05D010058 ORTHO05D010053 7.5e-07 57.0 72 40.3
COL.COLO4_16004 Corchorus olitorius HOM05D010058 ORTHO05D010053 9.8e-07 56.6 73 41.1
FvH4_7g05810 Fragaria vesca HOM05D009648 ORTHO05D012222 9.8e-07 56.6 81 39.5
Gohir.A01G013201 Gossypium hirsutum HOM05D010058 ORTHO05D010053 9.8e-07 56.6 72 40.3
Thecc.04G269000 Theobroma cacao HOM05D010058 ORTHO05D010053 9.8e-07 56.6 78 33.3
GSVIVG01001774001 Vitis vinifera HOM05D013903 ORTHO05D010053 9.8e-07 56.6 72 37.5
Aa31sc98G20 Aethionema arabicum HOM05D010086 ORTHO05D010053 1.7e-06 55.8 67 41.8
AT5G48905 Arabidopsis thaliana HOM05D010086 ORTHO05D010053 2.9e-06 55.1 70 37.1
Manes.15G086200 Manihot esculenta HOM05D013903 ORTHO05D010053 3.7e-06 54.7 76 36.8
Nn3g17752 Nelumbo nucifera HOM05D014595 ORTHO05D015167 3.7e-06 54.7 56 42.9
BraA06t26798Z Brassica rapa HOM05D010086 ORTHO05D010053 4.9e-06 54.3 67 35.8
Carub.0008s0863 Capsella rubella HOM05D010086 ORTHO05D010053 4.9e-06 54.3 70 40.0
Thhalv10005578m.g Eutrema salsugineum HOM05D010086 ORTHO05D010053 4.9e-06 54.3 69 39.1
A09p04690 Brassica napus HOM05D010086 ORTHO05D010053 6.4e-06 53.9 70 37.1
C09p05000 Brassica napus HOM05D010086 ORTHO05D010053 6.4e-06 53.9 70 37.1
BolC9t53429H Brassica oleracea HOM05D010086 ORTHO05D010053 6.4e-06 53.9 70 37.1
BraA09t36106Z Brassica rapa HOM05D010086 ORTHO05D010053 6.4e-06 53.9 70 37.1
Nn3g17739 Nelumbo nucifera HOM05D014595 ORTHO05D015167 6.4e-06 53.9 66 45.5
C07p39500 Brassica napus HOM05D010086 ORTHO05D010053 8.3e-06 53.5 68 33.8
BolC7t44469H Brassica oleracea HOM05D010086 ORTHO05D010053 8.3e-06 53.5 68 33.8


User provided reference genes

Program Settings