Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G00344 Aquilegia oxysepala HOM05D005019 ORTHO05D006625 5.9e-311 1070.1 576 100.0
Aqoxy6G01670 Aquilegia oxysepala HOM05D005019 ORTHO05D006625 7.3e-309 1063.1 576 98.6
Dinv22477 Davidia involucrata HOM05D005019 ORTHO05D006625 7.6e-205 717.6 589 64.5
Dinv34572 Davidia involucrata HOM05D005019 ORTHO05D006625 2.2e-204 716.1 583 69.1
TAR633G0331 Trochodendron aralioides HOM05D005019 ORTHO05D006625 2.2e-204 716.1 580 65.3
Nn7g37931 Nelumbo nucifera HOM05D005019 ORTHO05D006625 4.2e-203 711.8 568 69.0
Actinidia21157 Actinidia chinensis HOM05D005019 ORTHO05D006625 1.5e-200 703.4 586 65.2
TWI31G0602 Tripterygium wilfordii HOM05D005019 ORTHO05D006625 1.9e-200 703.0 581 64.4
Cfa002330 Carpinus fangiana HOM05D005019 ORTHO05D006625 1.6e-199 699.9 584 63.4
Lj1C59T1 Lonicera japonica HOM05D005019 ORTHO05D006625 1.8e-198 696.4 581 65.7
GSVIVG01000726001 Vitis vinifera HOM05D005019 ORTHO05D006625 1.8e-198 696.4 584 63.4
Duzib147G1145 Durio zibethinus HOM05D005019 ORTHO05D006625 7.6e-197 691.0 582 64.9
RcHm_v2.0_Chr6g0289431 Rosa chinensis HOM05D005019 ORTHO05D006625 9.9e-197 690.6 585 63.6
Ciclev10019516m.g Citrus clementina HOM05D005019 ORTHO05D006625 2.2e-196 689.5 583 63.6
Thecc.01G159500 Theobroma cacao HOM05D005019 ORTHO05D006625 4.9e-196 688.3 583 64.8
FvH4_2g22480 Fragaria vesca HOM05D005019 ORTHO05D006625 1.4e-195 686.8 499 69.9
FAN24G1214 Fragaria x ananassa HOM05D005019 ORTHO05D006625 1.9e-195 686.4 499 69.9
CiPaw.03G257900 Carya illinoinensis HOM05D005019 ORTHO05D006625 3.2e-195 685.6 584 61.8
CANSAT35G0193 Cannabis sativa HOM05D005019 ORTHO05D006625 5.4e-195 684.9 584 64.4
FAN20G1740 Fragaria x ananassa HOM05D005019 ORTHO05D006625 5.4e-195 684.9 583 62.4
Potri.005G218600 Populus trichocarpa HOM05D005019 ORTHO05D006625 7.1e-195 684.5 499 69.7
Prupe.8G231800 Prunus persica HOM05D005019 ORTHO05D006625 7.1e-195 684.5 582 62.0
FvH4_5g20520 Fragaria vesca HOM05D005019 ORTHO05D006625 1.6e-194 683.3 501 69.1
FAN27G0650 Fragaria x ananassa HOM05D005019 ORTHO05D006625 1.6e-194 683.3 583 62.3
Prupe.5G054300 Prunus persica HOM05D005019 ORTHO05D006625 1.6e-194 683.3 586 62.8
Gohir.A11G329100 Gossypium hirsutum HOM05D005019 ORTHO05D006625 2.7e-194 682.6 502 69.5
arahy.Tifrunner.gnm1.ann1.TZR8AU Arachis hypogaea HOM05D005019 ORTHO05D006625 1.0e-193 680.6 498 68.1
Gorai.007G378500 Gossypium raimondii HOM05D005019 ORTHO05D006625 2.3e-193 679.5 584 64.7
Gohir.D11G348100 Gossypium hirsutum HOM05D005019 ORTHO05D006625 3.0e-193 679.1 584 64.9
Rhsim07G0080400 Rhododendron simsii HOM05D005019 ORTHO05D006625 8.7e-193 677.6 583 64.5
Manes.16G024300 Manihot esculenta HOM05D005019 ORTHO05D006625 3.3e-192 675.6 581 62.3
Lj1P543T22 Lonicera japonica HOM05D005019 ORTHO05D006625 4.3e-192 675.2 495 69.1
Cc02_g22310 Coffea canephora HOM05D005019 ORTHO05D006625 7.3e-192 674.5 577 60.8
Gohir.D04G014300 Gossypium hirsutum HOM05D005019 ORTHO05D006625 7.3e-192 674.5 502 68.3
Gorai.012G016900 Gossypium raimondii HOM05D005019 ORTHO05D006625 9.6e-192 674.1 502 68.5
Sed0015889 Sechium edule HOM05D005019 ORTHO05D006625 1.3e-191 673.7 503 68.6
FAN15G0975 Fragaria x ananassa HOM05D005019 ORTHO05D006625 2.1e-191 672.9 499 69.1
Atru.chr5.1578 Acer truncatum HOM05D005019 ORTHO05D006625 6.2e-191 671.4 584 62.7
FAN18G2643 Fragaria x ananassa HOM05D005019 ORTHO05D006625 1.1e-190 670.6 584 62.0
MELO3C020849.2 Cucumis melo HOM05D005019 ORTHO05D006625 1.4e-190 670.2 498 68.9
Haze_24536 Corylus avellana HOM05D005019 ORTHO05D006625 3.1e-190 669.1 563 62.9
FAN04G2884 Fragaria x ananassa HOM05D005019 ORTHO05D006625 6.9e-190 667.9 501 67.7
TPR.G9511 Trifolium pratense HOM05D005019 ORTHO05D006625 6.9e-190 667.9 582 61.2
Lalb_Chr19g0134621 Lupinus albus HOM05D005019 ORTHO05D006625 9.0e-190 667.5 579 61.3
Lalb_Chr03g0030271 Lupinus albus HOM05D005019 ORTHO05D006625 2.0e-189 666.4 578 61.2
ClCG02G012250 Citrullus lanatus HOM05D005019 ORTHO05D006625 3.4e-189 665.6 590 60.3
Psat1g046760 Pisum sativum HOM05D005019 ORTHO05D006625 3.4e-189 665.6 585 61.2
PSO210G0391 Papaver somniferum HOM05D005019 ORTHO05D006625 7.6e-189 664.5 577 61.2
Eucgr.K03309 Eucalyptus grandis HOM05D005019 ORTHO05D006625 1.3e-188 663.7 582 61.7
Ca_00175_v3 Cicer arietinum L. HOM05D005019 ORTHO05D006625 1.7e-188 663.3 585 60.7
Glyma.13G255400 Glycine max HOM05D005019 ORTHO05D006625 6.4e-188 661.4 585 60.7
MD05G1205400 Malus domestica HOM05D005019 ORTHO05D006625 6.4e-188 661.4 495 67.7
Lj1g0019097 Lotus japonicus HOM05D005019 ORTHO05D006625 1.1e-187 660.6 505 67.5
PGR044G0331 Punica granatum HOM05D005019 ORTHO05D006625 1.1e-187 660.6 594 60.4
Medtr2g009800 Medicago truncatula HOM05D005019 ORTHO05D006625 1.4e-187 660.2 583 60.5
PSO210G5187 Papaver somniferum HOM05D005019 ORTHO05D006625 1.4e-187 660.2 578 61.6
MD10G1192400 Malus domestica HOM05D005019 ORTHO05D006625 2.4e-187 659.4 587 60.6
Psat1g214520 Pisum sativum HOM05D005019 ORTHO05D006625 2.4e-187 659.4 589 60.8
Sc04g0003030 Simmondsia chinensis HOM05D005019 ORTHO05D006625 2.4e-187 659.4 584 62.5
CsaV3_2G016400 Cucumis sativus L. HOM05D005019 ORTHO05D006625 7.1e-187 657.9 587 60.8
VMungo0540G2473 Vigna mungo HOM05D005019 ORTHO05D006625 9.3e-187 657.5 507 65.3
Cpa.g.sc200.5 Carica papaya HOM05D005019 ORTHO05D006625 1.2e-186 657.1 582 63.7
Glyma.15G059400 Glycine max HOM05D005019 ORTHO05D006625 2.1e-186 656.4 592 60.3
Migut.N02183 Erythranthe guttata HOM05D005019 ORTHO05D006625 1.3e-185 653.7 585 62.7
MBI12_g17287_MAGBIO Magnolia biondii HOM05D005019 ORTHO05D006625 5.6e-184 648.3 582 60.8
Medtr2g101620 Medicago truncatula HOM05D005019 ORTHO05D006625 1.3e-183 647.1 582 59.8
HanXRQChr14g0454081 Helianthus annuus HOM05D005019 ORTHO05D006625 3.7e-183 645.6 494 65.0
ECA247G2036 Erigeron canadensis HOM05D005019 ORTHO05D006625 4.8e-183 645.2 495 65.5
Phvul.006G200700 Phaseolus vulgaris HOM05D005019 ORTHO05D006625 1.1e-182 644.0 586 59.6
ClCG07G000610 Citrullus lanatus HOM05D005019 ORTHO05D006625 6.9e-182 641.3 488 66.8
Sabra05G0167700 Salix brachista HOM05D005019 ORTHO05D006625 3.4e-181 639.0 573 62.0
EL10Ac5g11096 Beta vulgaris HOM05D005019 ORTHO05D006625 7.6e-181 637.9 588 59.7
DCAR_002684 Daucus carota HOM05D005019 ORTHO05D006625 7.6e-181 637.9 585 59.8
PGSC0003DMG400023686 Solanum tuberosum HOM05D005019 ORTHO05D006625 7.6e-181 637.9 500 65.0
AUR62008493 Chenopodium quinoa HOM05D005019 ORTHO05D006625 9.9e-181 637.5 498 66.7
AUR62037688 Chenopodium quinoa HOM05D005019 ORTHO05D006625 9.9e-181 637.5 502 66.7
Ah.02g113910 Amaranthus hybridus HOM05D005019 ORTHO05D006625 1.7e-180 636.7 590 58.1
GSVIVG01003806001 Vitis vinifera HOM05D005019 ORTHO05D006625 1.7e-180 636.7 580 61.0
MSTRG.12540 Avicennia marina HOM05D005019 ORTHO05D006625 1.1e-179 634.0 587 57.1
THA.LOC104806394 Tarenaya hassleriana HOM05D005019 ORTHO05D006625 1.4e-179 633.6 500 64.6
Solyc10g080180.3 Solanum lycopersicum HOM05D005019 ORTHO05D006625 1.9e-179 633.3 500 64.8
Gohir.A05G401500 Gossypium hirsutum HOM05D005019 ORTHO05D006625 4.2e-179 632.1 502 65.7
Oeu018172.1 Olea europaea HOM05D005019 ORTHO05D006625 9.3e-179 630.9 584 61.1
Nitab4.5_0010414g0010 Nicotiana tabacum HOM05D005019 ORTHO05D006625 1.2e-178 630.6 501 65.5
Lsat_1_v5_gn_9_9921 Lactuca sativa HOM05D005019 ORTHO05D006625 2.1e-178 629.8 583 59.2
Nitab4.5_0008299g0020 Nicotiana tabacum HOM05D005019 ORTHO05D006625 6.0e-178 628.2 501 65.3
Nitab4.5_0003006g0020 Nicotiana tabacum HOM05D005019 ORTHO05D006625 1.8e-177 626.7 501 65.3
CSS0021329 Camellia sinensis var. sinensis HOM05D005019 ORTHO05D006625 2.3e-177 626.3 584 60.4
Peaxi162Scf00045g00177 Petunia axillaris HOM05D005019 ORTHO05D006625 2.3e-177 626.3 502 64.5
Sopen10g030790 Solanum pennellii HOM05D005019 ORTHO05D006625 8.7e-177 624.4 500 64.0
SalBow6G4122 Salvia bowleyana HOM05D005019 ORTHO05D006625 1.6e-175 620.2 501 62.9
RcHm_v2.0_Chr7g0205871 Rosa chinensis HOM05D005019 ORTHO05D006625 2.1e-175 619.8 429 71.8
Nitab4.5_0001370g0040 Nicotiana tabacum HOM05D005019 ORTHO05D006625 2.8e-175 619.4 501 64.5
HPP92_026109 Vanilla planifolia HOM05D005019 ORTHO05D006625 3.7e-175 619.0 498 63.9
SalBow3G3235 Salvia bowleyana HOM05D005019 ORTHO05D006625 4.8e-175 618.6 588 58.7
Thhalv10013183m.g Eutrema salsugineum HOM05D005019 ORTHO05D006625 1.4e-174 617.1 499 64.1
ATR0564G197 Amborella trichopoda HOM05D005019 ORTHO05D006625 1.8e-174 616.7 500 61.6
AUR62021601 Chenopodium quinoa HOM05D005019 ORTHO05D006625 1.8e-174 616.7 584 59.2
Lsat_1_v5_gn_8_3120 Lactuca sativa HOM05D005019 ORTHO05D006625 2.4e-174 616.3 579 56.5
Aa31LG11G14850 Aethionema arabicum HOM05D005019 ORTHO05D006625 2.6e-173 612.8 540 62.4
vmacro14869 Vaccinium macrocarpon HOM05D005019 ORTHO05D006625 3.4e-173 612.5 571 61.6
AT5G14050 Arabidopsis thaliana HOM05D005019 ORTHO05D006625 2.2e-172 609.8 501 62.9
SGA_v2.0_scaffold80G25914 Striga asiatica HOM05D005019 ORTHO05D006625 2.9e-172 609.4 513 60.8
Carub.0006s1224 Capsella rubella HOM05D005019 ORTHO05D006625 3.8e-172 609.0 503 62.0
Zm00001eb227850 Zea mays HOM05D005019 ORTHO05D006625 3.8e-172 609.0 583 59.3
AL6G24710 Arabidopsis lyrata HOM05D005019 ORTHO05D006625 4.9e-172 608.6 497 63.2
Sp6g29950 Schrenkiella parvula HOM05D005019 ORTHO05D006625 1.4e-171 607.1 580 57.8
CARHR199310 Cardamine hirsuta HOM05D005019 ORTHO05D006625 9.3e-171 604.4 499 62.5
Hund02608 Selenicereus undatus HOM05D005019 ORTHO05D006625 7.9e-170 601.3 495 63.8
AUR62025557 Chenopodium quinoa HOM05D005019 ORTHO05D006625 5.1e-169 598.6 455 67.0
Lj6g0023367 Lotus japonicus HOM05D005019 ORTHO05D006625 2.2e-167 593.2 583 56.6
Thecc.05G016300 Theobroma cacao HOM05D005019 ORTHO05D006625 1.7e-164 583.6 422 68.5
Hma1.2p1_1029F.1_g249600 Hydrangea macrophylla HOM05D005019 ORTHO05D006625 1.4e-163 580.5 345 80.9
Os07g0603200 Oryza sativa ssp. japonica HOM05D005019 ORTHO05D006625 1.9e-163 580.1 580 56.4
CDE04G3201 Ceratophyllum demersum HOM05D005019 ORTHO05D006625 1.0e-161 574.3 464 63.1
SHI13722 Sapria himalayana HOM05D005019 ORTHO05D006625 9.1e-158 561.2 502 59.2
SEGI_19346 Sequoiadendron giganteum HOM05D005019 ORTHO05D006625 6.7e-153 545.0 484 58.7
HPP92_022900 Vanilla planifolia HOM05D005019 ORTHO05D006625 6.7e-153 545.0 383 69.2
unitig_8.g4702 Utricularia gibba HOM05D005019 ORTHO05D006625 7.4e-152 541.6 504 55.0
Ciclev10006829m.g Citrus clementina HOM05D005019 ORTHO05D006625 1.6e-146 523.9 497 58.1
Mapoly0051s0055 Marchantia polymorpha HOM05D005019 ORTHO05D006625 5.3e-134 482.3 500 50.8
AagrBONN_evm.TU.Sc2ySwM_362.2571 Anthoceros agrestis HOM05D005019 ORTHO05D006625 6.5e-132 475.3 478 48.7
CDE02G2819 Ceratophyllum demersum HOM05D005019 ORTHO05D006625 3.0e-129 466.5 403 60.0
SMO356G0724 Selaginella moellendorffii HOM05D005019 ORTHO05D006625 1.7e-127 460.7 432 53.5
Rhsim01G0269300 Rhododendron simsii HOM05D005019 ORTHO05D006625 6.3e-119 432.2 258 77.9
QL02p075842 Quercus lobata HOM05D005019 ORTHO05D006625 7.0e-118 428.7 410 57.1
CBR_g21842 Chara braunii HOM05D005019 ORTHO05D006625 3.1e-113 413.3 515 42.7
Pp3c26_4890 Physcomitrium patens HOM05D005019 ORTHO05D006625 6.4e-111 405.6 443 47.4
AUR62008687 Chenopodium quinoa HOM05D005019 ORTHO05D006625 3.7e-95 353.2 466 46.8
CSS0011909 Camellia sinensis var. sinensis HOM05D005019 ORTHO05D006625 3.9e-92 343.2 500 43.4
Actinidia24938 Actinidia chinensis HOM05D005019 ORTHO05D006625 1.2e-90 338.2 445 46.7
MBI17_g40264_MAGBIO Magnolia biondii HOM05D005019 ORTHO05D006625 5.4e-86 322.8 298 59.4
Cre06.g255950 Chlamydomonas reinhardtii HOM05D005019 ORTHO05D006625 1.9e-83 314.3 469 39.0
MBI17_g13392_MAGBIO Magnolia biondii HOM05D005019 ORTHO05D012924 9.6e-83 312.0 377 50.4
AagrBONN_evm.TU.Sc2ySwM_228.5554 Anthoceros agrestis HOM05D005019 ORTHO05D006625 1.4e-81 308.1 309 49.8
MCO01G264 Micromonas commoda HOM05D005019 ORTHO05D006625 6.0e-69 266.2 450 36.2
PRCOL_00000196 Prasinoderma coloniale HOM05D005019 ORTHO05D006625 1.0e-68 265.4 326 42.6
BcaNung06034 Brassica carinata HOM05D005019 ORTHO05D006625 4.0e-65 253.4 240 59.2
TAR383G0651 Trochodendron aralioides HOM05D005019 ORTHO05D006625 9.3e-54 215.7 580 33.1
BcaB01g06348 Brassica carinata HOM05D005019 ORTHO05D006625 2.9e-39 167.5 264 39.8
Cfa024923 Carpinus fangiana HOM05D005019 ORTHO05D126389 9.4e-30 136.0 392 25.8
MD05G1205300 Malus domestica HOM05D005019 ORTHO05D048639 9.1e-25 119.4 143 49.7
QL02p076237 Quercus lobata HOM05D005019 ORTHO05D006625 2.2e-15 88.2 92 57.6
Zm00001eb227870 Zea mays HOM05D005019 ORTHO05D048639 2.9e-07 61.2 77 42.9


User provided reference genes

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