Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G00309 Aquilegia oxysepala HOM05D006504 ORTHO05D007867 4.7e-57 224.9 175 100.0
TAR383G0025 Trochodendron aralioides HOM05D006504 ORTHO05D007867 5.2e-40 168.3 175 74.9
Hma1.2p1_0388F.1_g142400 Hydrangea macrophylla HOM05D006504 ORTHO05D007867 5.7e-39 164.9 181 71.3
Nn8g38840 Nelumbo nucifera HOM05D006504 ORTHO05D007867 1.3e-38 163.7 173 62.4
Atru.chr1.3757 Acer truncatum HOM05D006504 ORTHO05D007867 1.1e-37 160.6 96 84.4
Potri.003G037200 Populus trichocarpa HOM05D006504 ORTHO05D007867 3.2e-37 159.1 96 84.4
Duzib235G1492 Durio zibethinus HOM05D006504 ORTHO05D007867 4.1e-37 158.7 96 82.3
Lj5A44T119 Lonicera japonica HOM05D006504 ORTHO05D007867 2.7e-36 156.0 96 81.2
GSVIVG01016863001 Vitis vinifera HOM05D006504 ORTHO05D007867 2.7e-36 156.0 96 81.2
Cc05_g02540 Coffea canephora HOM05D006504 ORTHO05D007867 3.5e-36 155.6 96 80.2
Gohir.D05G137200 Gossypium hirsutum HOM05D006504 ORTHO05D007867 1.7e-35 153.3 95 80.0
Gorai.009G141600 Gossypium raimondii HOM05D006504 ORTHO05D007867 1.7e-35 153.3 95 80.0
Cpa.g.sc25.42 Carica papaya HOM05D006504 ORTHO05D007867 3.9e-35 152.1 96 79.2
Gohir.A05G135200 Gossypium hirsutum HOM05D006504 ORTHO05D007867 3.9e-35 152.1 95 78.9
Eucgr.F03135 Eucalyptus grandis HOM05D006504 ORTHO05D007867 8.6e-35 151.0 96 77.1
CiPaw.01G224400 Carya illinoinensis HOM05D006504 ORTHO05D007867 3.3e-34 149.1 95 77.9
Manes.04G140200 Manihot esculenta HOM05D006504 ORTHO05D007867 3.3e-34 149.1 96 77.1
CsaV3_3G043850 Cucumis sativus L. HOM05D006504 ORTHO05D007867 4.3e-34 148.7 96 78.1
PSO210G6889 Papaver somniferum HOM05D006504 ORTHO05D007867 4.3e-34 148.7 93 78.5
Prupe.3G049000 Prunus persica HOM05D006504 ORTHO05D007867 4.3e-34 148.7 96 77.1
arahy.Tifrunner.gnm1.ann1.2CYW67 Arachis hypogaea HOM05D006504 ORTHO05D007867 5.6e-34 148.3 96 78.1
arahy.Tifrunner.gnm1.ann1.S1QT98 Arachis hypogaea HOM05D006504 ORTHO05D007867 5.6e-34 148.3 96 78.1
Glyma.07G009300 Glycine max HOM05D006504 ORTHO05D007867 7.3e-34 147.9 96 77.1
Manes.11G025900 Manihot esculenta HOM05D006504 ORTHO05D007867 7.3e-34 147.9 100 76.0
HanXRQChr12g0360501 Helianthus annuus HOM05D006504 ORTHO05D007867 9.5e-34 147.5 96 76.0
Lsat_1_v5_gn_5_135100 Lactuca sativa HOM05D006504 ORTHO05D007867 9.5e-34 147.5 96 76.0
CSS0018438 Camellia sinensis var. sinensis HOM05D006504 ORTHO05D007867 1.6e-33 146.7 95 77.9
PSO210G7829 Papaver somniferum HOM05D006504 ORTHO05D007867 1.6e-33 146.7 93 77.4
Lalb_Chr25g0280741 Lupinus albus HOM05D006504 ORTHO05D007867 2.1e-33 146.4 96 77.1
Gohir.D10G060350 Gossypium hirsutum HOM05D006504 ORTHO05D007867 6.2e-33 144.8 96 76.0
TWI31G0577 Tripterygium wilfordii HOM05D006504 ORTHO05D007867 6.2e-33 144.8 96 77.1
Gorai.011G064600 Gossypium raimondii HOM05D006504 ORTHO05D007867 8.0e-33 144.4 96 76.0
HPP92_023888 Vanilla planifolia HOM05D006504 ORTHO05D007867 8.0e-33 144.4 96 71.9
Thecc.06G112500 Theobroma cacao HOM05D006504 ORTHO05D007867 1.0e-32 144.1 96 75.0
VMungo0331G1418 Vigna mungo HOM05D006504 ORTHO05D007867 1.4e-32 143.7 96 74.0
Glyma.08G192500 Glycine max HOM05D006504 ORTHO05D007867 1.8e-32 143.3 96 75.0
Lj3g0009120 Lotus japonicus HOM05D006504 ORTHO05D007867 2.3e-32 142.9 96 74.0
ECA234G1551 Erigeron canadensis HOM05D000001 ORTHO05D009948 3.1e-32 142.5 96 72.9
Ciclev10026403m.g Citrus clementina HOM05D006504 ORTHO05D007867 4.0e-32 142.1 94 76.6
THA.LOC104822636 Tarenaya hassleriana HOM05D006504 ORTHO05D007867 6.8e-32 141.4 96 74.0
CAN.G675.25 Capsicum annuum HOM05D006504 ORTHO05D007867 8.9e-32 141.0 96 74.0
Medtr8g017180 Medicago truncatula HOM05D006504 ORTHO05D007867 8.9e-32 141.0 96 74.0
RcHm_v2.0_Chr2g0143361 Rosa chinensis HOM05D006504 ORTHO05D007867 8.9e-32 141.0 96 75.0
AT1G55080 Arabidopsis thaliana HOM05D006504 ORTHO05D007867 1.2e-31 140.6 98 72.4
QL05p000757 Quercus lobata HOM05D006504 ORTHO05D007867 1.2e-31 140.6 95 75.8
Psat4g188440 Pisum sativum HOM05D006504 ORTHO05D007867 2.0e-31 139.8 96 74.0
QL05p000665 Quercus lobata HOM05D006504 ORTHO05D007867 2.6e-31 139.4 95 74.7
Solyc02g069520.2 Solanum lycopersicum HOM05D006504 ORTHO05D007867 2.6e-31 139.4 96 71.9
Sopen02g018660 Solanum pennellii HOM05D006504 ORTHO05D007867 2.6e-31 139.4 96 71.9
AL1G63070 Arabidopsis lyrata HOM05D006504 ORTHO05D007867 3.4e-31 139.0 96 71.9
TPR.G37598 Trifolium pratense HOM05D006504 ORTHO05D007867 3.4e-31 139.0 96 74.0
ATR0661G108 Amborella trichopoda HOM05D006504 ORTHO05D007867 4.4e-31 138.7 95 74.7
FvH4_6g33500 Fragaria vesca HOM05D006504 ORTHO05D007867 5.8e-31 138.3 96 71.9
FAN02G0681 Fragaria x ananassa HOM05D006504 ORTHO05D007867 5.8e-31 138.3 96 72.9
FAN14G5793 Fragaria x ananassa HOM05D006504 ORTHO05D007867 5.8e-31 138.3 96 71.9
FAN09G0296 Fragaria x ananassa HOM05D006504 ORTHO05D007867 3.7e-30 135.6 96 70.8
Nn8g38837 Nelumbo nucifera HOM05D006504 ORTHO05D007867 3.7e-30 135.6 153 61.4
MSTRG.22579 Avicennia marina HOM05D006504 ORTHO05D007867 6.4e-30 134.8 91 74.7
Carub.0001s4357 Capsella rubella HOM05D006504 ORTHO05D007867 8.3e-30 134.4 96 68.8
Sp1g40740 Schrenkiella parvula HOM05D006504 ORTHO05D007867 8.3e-30 134.4 96 69.8
Peaxi162Scf00195g00313 Petunia axillaris HOM05D006504 ORTHO05D007867 1.1e-29 134.0 94 71.3
CARHR044670 Cardamine hirsuta HOM05D006504 ORTHO05D007867 1.4e-29 133.7 96 69.8
COL.COLO4_30670 Corchorus olitorius HOM05D006504 ORTHO05D007867 1.9e-29 133.3 86 77.9
Nn5g26799 Nelumbo nucifera HOM05D006504 ORTHO05D007867 1.9e-29 133.3 156 66.0
arahy.Tifrunner.gnm1.ann1.Y1EG1J Arachis hypogaea HOM05D006504 ORTHO05D007867 4.1e-29 132.1 85 78.8
FAN21G2275 Fragaria x ananassa HOM05D006504 ORTHO05D007867 4.1e-29 132.1 94 71.3
Os01g0501000 Oryza sativa ssp. japonica HOM05D006504 ORTHO05D007867 1.2e-28 130.6 95 67.4
BcaB04g17003 Brassica carinata HOM05D006504 ORTHO05D007867 1.6e-28 130.2 96 70.8
HPP92_023833 Vanilla planifolia HOM05D006504 ORTHO05D007867 2.0e-28 129.8 91 68.1
CDE04G1380 Ceratophyllum demersum HOM05D006504 ORTHO05D007867 2.7e-28 129.4 96 66.7
BolC3t21536H Brassica oleracea HOM05D006504 ORTHO05D007867 3.5e-28 129.0 96 69.8
BraA08t32155Z Brassica rapa HOM05D006504 ORTHO05D007867 4.6e-28 128.6 96 69.8
Sc12g0010270 Simmondsia chinensis HOM05D006504 ORTHO05D007867 6.0e-28 128.3 84 76.2
BcaC01g01455 Brassica carinata HOM05D006504 ORTHO05D007867 7.8e-28 127.9 96 68.8
MELO3C030574.2 Cucumis melo HOM05D006504 ORTHO05D007867 2.3e-27 126.3 78 82.1
PGR102G0591 Punica granatum HOM05D006504 ORTHO05D007867 3.0e-27 125.9 99 68.7
Ah.08g216230 Amaranthus hybridus HOM05D006504 ORTHO05D007867 3.9e-27 125.6 88 68.2
arahy.Tifrunner.gnm1.ann1.IBA4C6 Arachis hypogaea HOM05D006504 ORTHO05D007867 6.6e-27 124.8 85 75.3
Cfa003580 Carpinus fangiana HOM05D006504 ORTHO05D007867 6.6e-27 124.8 85 74.1
MD09G1192700 Malus domestica HOM05D006504 ORTHO05D007867 6.6e-27 124.8 79 81.0
Migut.I01030 Erythranthe guttata HOM05D006504 ORTHO05D007867 8.6e-27 124.4 91 68.1
PGSC0003DMG400021202 Solanum tuberosum HOM05D006504 ORTHO05D007867 1.1e-26 124.0 87 71.3
ATR0800G060 Amborella trichopoda HOM05D006504 ORTHO05D007867 1.5e-23 113.6 77 74.0
Aa31LG10G870 Aethionema arabicum HOM05D006504 ORTHO05D007867 2.0e-23 113.2 123 52.8
BcaB03g13872 Brassica carinata HOM05D006504 ORTHO05D007867 4.4e-23 112.1 94 61.7
BolC6t36770H Brassica oleracea HOM05D006504 ORTHO05D007867 1.3e-22 110.5 96 63.5
A08p01030 Brassica napus HOM05D001264 ORTHO05D007867 1.7e-22 110.2 79 74.7
C03p92210 Brassica napus HOM05D001264 ORTHO05D007867 1.7e-22 110.2 79 74.7
BraA05t20659Z Brassica rapa HOM05D006504 ORTHO05D007867 3.7e-22 109.0 96 62.5
CDE06G0601 Ceratophyllum demersum HOM05D006504 ORTHO05D007867 3.7e-22 109.0 87 63.2
Rhsim12G0206400 Rhododendron simsii HOM05D006504 ORTHO05D007867 1.1e-21 107.5 104 60.6
A07p10460 Brassica napus HOM05D006504 ORTHO05D007867 3.2e-21 105.9 92 56.5
BraA07t28846Z Brassica rapa HOM05D006504 ORTHO05D007867 3.2e-21 105.9 92 56.5
BcaC06g35444 Brassica carinata HOM05D006504 ORTHO05D007867 4.1e-21 105.5 94 56.4
C07p16100 Brassica napus HOM05D006504 ORTHO05D007867 4.1e-21 105.5 94 56.4
BolC7t42095H Brassica oleracea HOM05D006504 ORTHO05D007867 4.1e-21 105.5 94 56.4
Mapoly0004s0244 Marchantia polymorpha HOM05D006504 ORTHO05D007867 2.1e-20 103.2 98 54.1
Carub.0001s2784 Capsella rubella HOM05D006504 ORTHO05D007867 1.0e-19 100.9 97 56.7
SEGI_28258 Sequoiadendron giganteum HOM05D006504 ORTHO05D007867 1.1e-18 97.4 93 53.8
QL05p000679 Quercus lobata HOM05D006504 ORTHO05D007867 2.5e-18 96.3 87 64.4
QL05p000687 Quercus lobata HOM05D006504 ORTHO05D007867 2.5e-18 96.3 87 64.4
A05p17670 Brassica napus HOM05D006504 ORTHO05D007867 3.3e-18 95.9 79 69.6
ClCG07G013760 Citrullus lanatus HOM05D006504 ORTHO05D007867 3.3e-18 95.9 81 66.7
C06p15780 Brassica napus HOM05D001264 ORTHO05D001167 4.3e-18 95.5 79 69.6
Zm00001eb066180 Zea mays HOM05D006504 ORTHO05D007867 4.7e-17 92.0 96 54.2
BcaC08g44177 Brassica carinata HOM05D001264 ORTHO05D001167 2.3e-16 89.7 79 67.1
Gohir.A10G058600 Gossypium hirsutum HOM05D006504 ORTHO05D007867 4.0e-16 89.0 65 67.7
TPR.G19289 Trifolium pratense HOM05D006504 ORTHO05D007867 5.2e-16 88.6 96 52.1
SGA_v2.0_scaffold127G34055 Striga asiatica HOM05D006504 ORTHO05D007867 2.9e-14 82.8 77 61.0
SMO358G0601 Selaginella moellendorffii HOM05D006504 ORTHO05D007867 1.4e-13 80.5 89 50.6
vmacro17023 Vaccinium macrocarpon HOM05D006504 ORTHO05D007867 2.4e-13 79.7 50 74.0
Sp3g12060 Schrenkiella parvula HOM05D006504 ORTHO05D007867 3.2e-13 79.3 79 55.7
AL1G43430 Arabidopsis lyrata HOM05D006504 ORTHO05D007867 7.1e-13 78.2 74 59.5
DCAR_007625 Daucus carota HOM05D006504 ORTHO05D007867 3.5e-12 75.9 85 49.4
Nitab4.5_0001219g0120 Nicotiana tabacum HOM05D006504 ORTHO05D007867 3.5e-12 75.9 88 50.0
Haze_15959 Corylus avellana HOM05D006504 ORTHO05D007867 6.0e-12 75.1 48 75.0
Thhalv10022201m.g Eutrema salsugineum HOM05D006504 ORTHO05D007867 5.1e-11 72.0 68 61.8
Pp3c21_4920 Physcomitrium patens HOM05D006504 ORTHO05D007867 9.6e-10 67.8 98 39.8
SGA_v2.0_scaffold464G52010 Striga asiatica HOM05D006504 ORTHO05D007867 5.2e-08 62.0 35 82.9
AT1G29580 Arabidopsis thaliana HOM05D006504 ORTHO05D007867 2.0e-07 60.1 96 43.8
AagrBONN_evm.TU.Sc2ySwM_344.1668 Anthoceros agrestis HOM05D006504 ORTHO05D007867 2.6e-07 59.7 59 47.5
Phvul.010G138400 Phaseolus vulgaris HOM05D006504 ORTHO05D007867 1.7e-06 57.0 37 75.7
Aa31LG8G1010 Aethionema arabicum HOM05D006504 ORTHO05D007867 8.4e-06 54.7 58 48.3


User provided reference genes

Program Settings