Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G00253 Aquilegia oxysepala HOM05D006457 ORTHO05D008275 2.0e-136 489.2 260 100.0
Nn3g19624 Nelumbo nucifera HOM05D006457 ORTHO05D008275 1.1e-118 430.3 260 87.7
Nn1g02723 Nelumbo nucifera HOM05D006457 ORTHO05D008275 1.9e-118 429.5 260 87.3
TAR636G2559 Trochodendron aralioides HOM05D006457 ORTHO05D008275 9.2e-118 427.2 260 86.5
Hma1.2p1_0267F.1_g107360 Hydrangea macrophylla HOM05D006457 ORTHO05D008275 2.3e-116 422.5 260 84.2
GSVIVG01027767001 Vitis vinifera HOM05D006457 ORTHO05D008275 5.1e-116 421.4 260 85.4
PSO210G6447 Papaver somniferum HOM05D006457 ORTHO05D008275 1.1e-115 420.2 264 85.2
PSO832G2062 Papaver somniferum HOM05D006457 ORTHO05D008275 1.1e-115 420.2 264 84.8
MBI18_g15334_MAGBIO Magnolia biondii HOM05D006457 ORTHO05D008275 3.3e-115 418.7 260 84.2
ECA233G3697 Erigeron canadensis HOM05D006457 ORTHO05D008275 1.2e-114 416.8 257 83.3
Atru.chr4.2091 Acer truncatum HOM05D006457 ORTHO05D008275 2.1e-114 416.0 260 83.1
QL06p016992 Quercus lobata HOM05D006457 ORTHO05D008275 2.1e-114 416.0 259 84.6
DCAR_027307 Daucus carota HOM05D006457 ORTHO05D008275 4.7e-114 414.8 260 82.7
Lj6A662T59 Lonicera japonica HOM05D006457 ORTHO05D008275 3.1e-113 412.1 260 82.7
Cfa008326 Carpinus fangiana HOM05D006457 ORTHO05D008275 4.0e-113 411.8 260 83.1
Haze_11345 Corylus avellana HOM05D006457 ORTHO05D008275 8.9e-113 410.6 260 82.7
Potri.008G165800 Populus trichocarpa HOM05D006457 ORTHO05D008275 8.9e-113 410.6 260 81.9
HanXRQChr05g0134481 Helianthus annuus HOM05D006457 ORTHO05D008275 1.2e-112 410.2 260 81.5
ClCG05G004380 Citrullus lanatus HOM05D006457 ORTHO05D008275 2.0e-112 409.5 257 80.9
CSS0034990 Camellia sinensis var. sinensis HOM05D006457 ORTHO05D008275 2.6e-112 409.1 260 82.7
PGR031G3937 Punica granatum HOM05D006457 ORTHO05D008275 4.4e-112 408.3 260 81.2
Ah.04g156060 Amaranthus hybridus HOM05D006457 ORTHO05D008275 9.9e-112 407.1 260 82.3
Cc03_g05380 Coffea canephora HOM05D006457 ORTHO05D008275 9.9e-112 407.1 260 81.5
Prupe.1G037500 Prunus persica HOM05D006457 ORTHO05D008275 9.9e-112 407.1 260 82.3
Psat6g128760 Pisum sativum HOM05D006457 ORTHO05D008275 2.2e-111 406.0 260 82.7
Lsat_1_v5_gn_5_72441 Lactuca sativa HOM05D006457 ORTHO05D008275 2.9e-111 405.6 257 81.7
Duzib212G0218 Durio zibethinus HOM05D006457 ORTHO05D008275 3.8e-111 405.2 260 81.5
MD13G1212500 Malus domestica HOM05D006457 ORTHO05D008275 3.8e-111 405.2 260 81.9
RcHm_v2.0_Chr4g0392411 Rosa chinensis HOM05D006457 ORTHO05D008275 3.8e-111 405.2 260 83.1
Gorai.006G072000 Gossypium raimondii HOM05D006457 ORTHO05D008275 4.9e-111 404.8 260 81.5
TPR.G26440 Trifolium pratense HOM05D006457 ORTHO05D008275 4.9e-111 404.8 260 83.1
Gohir.A09G058300 Gossypium hirsutum HOM05D006457 ORTHO05D008275 6.4e-111 404.4 260 81.5
MELO3C006434.2 Cucumis melo HOM05D006457 ORTHO05D008275 1.1e-110 403.7 260 79.6
HPP92_025980 Vanilla planifolia HOM05D006457 ORTHO05D008275 1.1e-110 403.7 260 80.8
EL10Ac3g05029 Beta vulgaris HOM05D006457 ORTHO05D008275 1.4e-110 403.3 260 80.8
Ciclev10005707m.g Citrus clementina HOM05D006457 ORTHO05D008275 1.4e-110 403.3 260 80.0
Sc19g0003600 Simmondsia chinensis HOM05D006457 ORTHO05D008275 1.4e-110 403.3 260 81.2
Hund03034 Selenicereus undatus HOM05D006457 ORTHO05D008275 2.4e-110 402.5 260 80.4
CsaV3_3G012200 Cucumis sativus L. HOM05D006457 ORTHO05D008275 3.2e-110 402.1 260 79.6
AUR62002111 Chenopodium quinoa HOM05D006457 ORTHO05D008275 4.1e-110 401.7 260 81.2
Thecc.04G253200 Theobroma cacao HOM05D006457 ORTHO05D008275 5.4e-110 401.4 260 81.5
Actinidia39894 Actinidia chinensis HOM05D006457 ORTHO05D008275 7.1e-110 401.0 260 81.2
FvH4_4g03430 Fragaria vesca HOM05D006457 ORTHO05D008275 7.1e-110 401.0 260 81.2
Glyma.10G187300 Glycine max HOM05D006457 ORTHO05D008275 7.1e-110 401.0 260 80.8
Glyma.20G203200 Glycine max HOM05D006457 ORTHO05D008275 7.1e-110 401.0 260 81.2
MSTRG.9902 Avicennia marina HOM05D006457 ORTHO05D008275 9.2e-110 400.6 260 80.8
Eucgr.H00173 Eucalyptus grandis HOM05D006457 ORTHO05D008275 9.2e-110 400.6 260 80.8
FAN22G0441 Fragaria x ananassa HOM05D006457 ORTHO05D008275 9.2e-110 400.6 260 81.5
Lj5g0021789 Lotus japonicus HOM05D006457 ORTHO05D008275 1.2e-109 400.2 260 81.2
Medtr1g074170 Medicago truncatula HOM05D006457 ORTHO05D008275 1.2e-109 400.2 260 80.8
vmacro15431 Vaccinium macrocarpon HOM05D006457 ORTHO05D008275 2.1e-109 399.4 260 81.2
Aa31LG5G3680 Aethionema arabicum HOM05D006457 ORTHO05D008275 2.7e-109 399.1 260 78.8
Migut.N00260 Erythranthe guttata HOM05D006457 ORTHO05D008275 2.7e-109 399.1 260 80.0
Manes.03G165500 Manihot esculenta HOM05D006457 ORTHO05D008275 6.0e-109 397.9 260 80.4
AL8G16870 Arabidopsis lyrata HOM05D006457 ORTHO05D008275 7.8e-109 397.5 260 78.5
Sed0004292 Sechium edule HOM05D006457 ORTHO05D008275 7.8e-109 397.5 260 78.5
Thhalv10003253m.g Eutrema salsugineum HOM05D006457 ORTHO05D008275 1.3e-108 396.7 260 78.5
Rhsim02G0036100 Rhododendron simsii HOM05D006457 ORTHO05D008275 1.3e-108 396.7 260 80.8
ATR0680G075 Amborella trichopoda HOM05D006457 ORTHO05D008275 1.7e-108 396.4 260 81.2
VMungo0720G2635 Vigna mungo HOM05D006457 ORTHO05D008275 2.3e-108 396.0 260 80.0
AT5G43430 Arabidopsis thaliana HOM05D006457 ORTHO05D008275 3.0e-108 395.6 260 78.1
CARHR180150 Cardamine hirsuta HOM05D006457 ORTHO05D008275 3.0e-108 395.6 260 77.7
CAN.G793.35 Capsicum annuum HOM05D006457 ORTHO05D008275 5.1e-108 394.8 260 78.8
Sp2g08310 Schrenkiella parvula HOM05D006457 ORTHO05D008275 5.1e-108 394.8 260 78.1
BcaC04g21915 Brassica carinata HOM05D006457 ORTHO05D008275 6.6e-108 394.4 260 79.2
BolC9t55493H Brassica oleracea HOM05D006457 ORTHO05D008275 8.6e-108 394.0 259 79.9
Peaxi162Scf00024g02411 Petunia axillaris HOM05D006457 ORTHO05D008275 1.5e-107 393.3 260 78.8
BcaB07g31008 Brassica carinata HOM05D006457 ORTHO05D008275 1.9e-107 392.9 261 78.5
Sabra08G0126300 Salix brachista HOM05D006457 ORTHO05D008275 1.9e-107 392.9 291 73.5
Solyc09g089880.3 Solanum lycopersicum HOM05D006457 ORTHO05D008275 1.9e-107 392.9 260 78.5
THA.LOC104801088 Tarenaya hassleriana HOM05D006457 ORTHO05D008275 2.5e-107 392.5 260 77.3
PGSC0003DMG400017180 Solanum tuberosum HOM05D006457 ORTHO05D008275 3.3e-107 392.1 260 78.5
A09p20470 Brassica napus HOM05D006457 ORTHO05D008275 4.3e-107 391.7 259 79.2
Nitab4.5_0003897g0020 Nicotiana tabacum HOM05D006457 ORTHO05D008275 9.6e-107 390.6 260 78.5
C09p25850 Brassica napus HOM05D006457 ORTHO05D008275 1.6e-106 389.8 259 79.5
Carub.0008s0516 Capsella rubella HOM05D006457 ORTHO05D008275 2.1e-106 389.4 260 76.5
Phvul.007G128300 Phaseolus vulgaris HOM05D006457 ORTHO05D008275 3.6e-106 388.7 260 79.2
SGA_v2.0_scaffold67G22771 Striga asiatica HOM05D006457 ORTHO05D008275 4.7e-106 388.3 291 72.5
arahy.Tifrunner.gnm1.ann1.YH23E2 Arachis hypogaea HOM05D006457 ORTHO05D008275 6.2e-106 387.9 256 78.9
Lalb_Chr02g0150531 Lupinus albus HOM05D006457 ORTHO05D008275 6.2e-106 387.9 260 77.7
Sopen09g032820 Solanum pennellii HOM05D006457 ORTHO05D008275 6.2e-106 387.9 260 78.5
arahy.Tifrunner.gnm1.ann1.AG4MDC Arachis hypogaea HOM05D006457 ORTHO05D008275 8.1e-106 387.5 260 78.1
Ca_09820_v3 Cicer arietinum L. HOM05D006457 ORTHO05D008275 1.4e-105 386.7 289 74.0
Nitab4.5_0000342g0030 Nicotiana tabacum HOM05D006457 ORTHO05D008275 2.4e-105 386.0 260 77.7
SEGI_23974 Sequoiadendron giganteum HOM05D006457 ORTHO05D008275 4.0e-105 385.2 260 79.6
Dinv27040 Davidia involucrata HOM05D006457 ORTHO05D008275 6.9e-105 384.4 247 80.6
BraA09t37652Z Brassica rapa HOM05D006457 ORTHO05D008275 1.2e-104 383.6 269 76.2
FAN17G1464 Fragaria x ananassa HOM05D006457 ORTHO05D008275 7.6e-104 380.9 260 78.5
Os04g0182800 Oryza sativa ssp. japonica HOM05D006457 ORTHO05D008275 8.7e-100 367.5 260 74.6
Zm00001eb419600 Zea mays HOM05D006457 ORTHO05D008275 2.5e-99 365.9 260 73.1
Mapoly0061s0138 Marchantia polymorpha HOM05D006457 ORTHO05D008275 6.2e-98 361.3 260 74.2
Pp3c16_12620 Physcomitrium patens HOM05D006457 ORTHO05D008275 1.8e-97 359.8 260 73.5
AUR62028231 Chenopodium quinoa HOM05D006457 ORTHO05D008275 3.1e-97 359.0 228 82.0
SMO145G0254 Selaginella moellendorffii HOM05D006457 ORTHO05D008275 3.4e-96 355.5 260 71.2
FAN12G4283 Fragaria x ananassa HOM05D006457 ORTHO05D008275 3.2e-94 349.0 280 70.0
AagrBONN_evm.TU.Sc2ySwM_228.708 Anthoceros agrestis HOM05D006457 ORTHO05D008275 7.9e-93 344.4 260 71.9
SHI00666 Sapria himalayana HOM05D006457 ORTHO05D008275 1.0e-92 344.0 275 67.3
Cpa.g.sc44.77 Carica papaya HOM05D006457 ORTHO05D008275 1.1e-86 323.9 263 68.1
TWI73G0230 Tripterygium wilfordii HOM05D006457 ORTHO05D008275 2.4e-86 322.8 260 68.8
Gohir.D09G057800 Gossypium hirsutum HOM05D006457 ORTHO05D008275 1.4e-81 307.0 198 81.3
SalBow3G1824 Salvia bowleyana HOM05D006457 ORTHO05D008275 9.0e-81 304.3 282 62.4
Dinv29877 Davidia involucrata HOM05D006457 ORTHO05D008275 5.8e-80 301.6 185 83.8
Hma1.2p1_0267F.1_g107350 Hydrangea macrophylla HOM05D006457 ORTHO05D008275 1.9e-78 296.6 184 82.6
unitig_748.g7323 Utricularia gibba HOM05D006457 ORTHO05D008275 4.2e-78 295.4 199 76.9
Haze_27028 Corylus avellana HOM05D006457 ORTHO05D008275 7.9e-77 291.2 260 61.2
THA.LOC104826077 Tarenaya hassleriana HOM05D006457 ORTHO05D008275 7.9e-77 291.2 237 66.2
CiPaw.02G113800 Carya illinoinensis HOM05D006457 ORTHO05D008275 2.3e-76 289.7 185 81.6
Cre12.g554953 Chlamydomonas reinhardtii HOM05D006457 ORTHO05D008275 1.6e-74 283.5 278 57.2
PRCOL_00002410 Prasinoderma coloniale HOM05D006457 ORTHO05D008275 1.9e-70 270.0 260 56.5
CDE05G1545 Ceratophyllum demersum HOM05D006457 ORTHO05D008275 1.9e-62 243.4 166 78.3
Haze_26122 Corylus avellana HOM05D006457 ORTHO05D008275 3.2e-62 242.7 254 54.3
Haze_27526 Corylus avellana HOM05D006457 ORTHO05D008275 1.2e-61 240.7 260 54.2
CANSAT78G2507 Cannabis sativa HOM05D006457 ORTHO05D008275 5.1e-60 235.3 153 79.7
Cfa021602 Carpinus fangiana HOM05D006457 ORTHO05D008275 1.3e-55 220.7 257 47.9
Zm00001eb087650 Zea mays HOM05D006457 ORTHO05D008275 5.3e-49 198.7 123 80.5
HanXRQChr03g0066771 Helianthus annuus HOM05D006457 ORTHO05D008275 2.8e-34 149.8 104 74.0
Oeu011992.1 Olea europaea HOM05D006457 ORTHO05D008275 6.3e-34 148.7 86 86.0
MD16G1216100 Malus domestica HOM05D006457 ORTHO05D008275 5.9e-32 142.1 99 74.7
Oeu063893.1 Olea europaea HOM05D006457 ORTHO05D000397 6.3e-26 122.1 91 71.4
MBI15_g29425_MAGBIO Magnolia biondii HOM05D016614 ORTHO05D012466 1.3e-15 87.8 71 66.2
Hma1.2p1_0267F.1_g107370 Hydrangea macrophylla HOM05D006457 ORTHO05D008275 1.2e-13 81.3 49 83.7
VMungo0720G2370 Vigna mungo HOM05D006457 ORTHO05D008275 2.9e-10 70.1 49 67.3
RcHm_v2.0_Chr5g0058341 Rosa chinensis HOM05D006457 ORTHO05D008275 6.4e-10 68.9 34 88.2


User provided reference genes

Program Settings