Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G00249 Aquilegia oxysepala HOM05D007526 ORTHO05D009350 4.4e-110 401.4 209 100.0
Nn3g19655 Nelumbo nucifera HOM05D007526 ORTHO05D009350 4.0e-31 139.0 233 42.9
TAR365G0977 Trochodendron aralioides HOM05D007526 ORTHO05D009350 2.9e-29 132.9 214 45.3
Nn1g02762 Nelumbo nucifera HOM05D007526 ORTHO05D009350 1.5e-25 120.6 240 40.8
MBI07_g16245_MAGBIO Magnolia biondii HOM05D007526 ORTHO05D009350 1.4e-20 104.0 216 38.9
TAR636G0759 Trochodendron aralioides HOM05D007526 ORTHO05D009350 1.9e-20 103.6 206 40.8
Haze_11381 Corylus avellana HOM05D007526 ORTHO05D009350 5.5e-20 102.1 216 38.0
QL06p017957 Quercus lobata HOM05D007526 ORTHO05D009350 9.3e-20 101.3 222 40.5
Cfa022958 Carpinus fangiana HOM05D007526 ORTHO05D009350 2.1e-19 100.1 216 38.9
Ciclev10005975m.g Citrus clementina HOM05D007526 ORTHO05D009350 1.1e-17 94.4 213 34.7
Oeu055231.1 Olea europaea HOM05D007526 ORTHO05D009350 1.5e-17 94.0 202 38.1
Sopen09g033060 Solanum pennellii HOM05D007526 ORTHO05D009350 4.3e-17 92.4 232 33.6
PGR004G2347 Punica granatum HOM05D007526 ORTHO05D009350 1.6e-16 90.5 221 35.3
Rhsim04G0182300 Rhododendron simsii HOM05D007526 ORTHO05D009350 2.8e-16 89.7 220 34.5
CiPaw.01G184600 Carya illinoinensis HOM05D007526 ORTHO05D009350 3.7e-16 89.4 221 37.1
Lj6g0011756 Lotus japonicus HOM05D007526 ORTHO05D009350 8.2e-16 88.2 209 33.5
CSS0033898 Camellia sinensis var. sinensis HOM05D007526 ORTHO05D009350 1.1e-15 87.8 218 35.8
Manes.15G040900 Manihot esculenta HOM05D007526 ORTHO05D009350 1.4e-15 87.4 224 34.4
Lalb_Chr19g0128211 Lupinus albus HOM05D007526 ORTHO05D009350 4.0e-15 85.9 214 34.6
RcHm_v2.0_Chr4g0393211 Rosa chinensis HOM05D007526 ORTHO05D009350 6.9e-15 85.1 215 36.3
Cc03_g05540 Coffea canephora HOM05D007526 ORTHO05D009350 9.0e-15 84.7 213 33.3
Potri.008G167200 Populus trichocarpa HOM05D007526 ORTHO05D009350 9.0e-15 84.7 216 32.9
TWI09G0237 Tripterygium wilfordii HOM05D007526 ORTHO05D009350 9.0e-15 84.7 225 32.0
Glyma.10G181000 Glycine max HOM05D007526 ORTHO05D009350 2.0e-14 83.6 210 34.3
Duzib212G0007 Durio zibethinus HOM05D007526 ORTHO05D009350 4.5e-14 82.4 220 32.7
CsaV3_3G012050 Cucumis sativus L. HOM05D007526 ORTHO05D009350 5.8e-14 82.0 225 33.3
PGSC0003DMG400017266 Solanum tuberosum HOM05D007526 ORTHO05D009350 7.6e-14 81.6 233 33.5
Atru.chr4.2058 Acer truncatum HOM05D007526 ORTHO05D009350 1.0e-13 81.3 216 31.5
CSS0016058 Camellia sinensis var. sinensis HOM05D007526 ORTHO05D009350 1.0e-13 81.3 209 34.9
Hma1.2p1_0273F.1_g109700 Hydrangea macrophylla HOM05D008367 ORTHO05D010529 1.0e-13 81.3 213 31.9
Manes.03G164000 Manihot esculenta HOM05D007526 ORTHO05D009350 1.0e-13 81.3 221 33.0
QL09p038772 Quercus lobata HOM05D008367 ORTHO05D010529 1.0e-13 81.3 211 34.1
Gorai.006G253500 Gossypium raimondii HOM05D007526 ORTHO05D009350 1.7e-13 80.5 221 31.2
VMungo0720G1630 Vigna mungo HOM05D007526 ORTHO05D009350 1.7e-13 80.5 209 32.5
FvH4_4g03670 Fragaria vesca HOM05D007526 ORTHO05D009350 2.2e-13 80.1 220 34.1
FAN12G2381 Fragaria x ananassa HOM05D007526 ORTHO05D009350 2.2e-13 80.1 220 34.1
FAN17G0331 Fragaria x ananassa HOM05D007526 ORTHO05D009350 2.9e-13 79.7 222 33.3
Prupe.1G039600 Prunus persica HOM05D007526 ORTHO05D009350 2.9e-13 79.7 240 31.7
Glyma.02G005400 Glycine max HOM05D007526 ORTHO05D009350 6.5e-13 78.6 216 34.3
Glyma.20G209500 Glycine max HOM05D007526 ORTHO05D009350 6.5e-13 78.6 211 31.8
Gohir.A09G229800 Gossypium hirsutum HOM05D007526 ORTHO05D009350 6.5e-13 78.6 221 30.8
VMungo0720G0856 Vigna mungo HOM05D007526 ORTHO05D009350 6.5e-13 78.6 238 32.4
Eucgr.H03043 Eucalyptus grandis HOM05D007526 ORTHO05D009350 8.4e-13 78.2 224 33.0
CANSAT78G2320 Cannabis sativa HOM05D007526 ORTHO05D009350 1.1e-12 77.8 238 32.8
Glyma.10G006400 Glycine max HOM05D007526 ORTHO05D009350 1.9e-12 77.0 228 32.9
MD16G1219200 Malus domestica HOM05D007526 ORTHO05D009350 1.9e-12 77.0 234 32.5
Cc01_g18350 Coffea canephora HOM05D008367 ORTHO05D010529 3.2e-12 76.3 202 34.2
Glyma.20G209600 Glycine max HOM05D007526 ORTHO05D009350 4.2e-12 75.9 205 33.2
Duzib151G1045 Durio zibethinus HOM05D007526 ORTHO05D009350 5.5e-12 75.5 217 30.0
MD13G1214200 Malus domestica HOM05D007526 ORTHO05D009350 7.1e-12 75.1 219 33.8
Potri.005G224200 Populus trichocarpa HOM05D008367 ORTHO05D010529 7.1e-12 75.1 196 33.2
Duzib138G1787 Durio zibethinus HOM05D008367 ORTHO05D010529 9.3e-12 74.7 201 33.3
Cpa.g.sc44.57 Carica papaya HOM05D007526 ORTHO05D009350 1.2e-11 74.3 214 29.9
Duzib133G0413 Durio zibethinus HOM05D008367 ORTHO05D010529 1.2e-11 74.3 206 32.5
Phvul.007G273600 Phaseolus vulgaris HOM05D007526 ORTHO05D009350 2.7e-11 73.2 239 30.5
Potri.002G038400 Populus trichocarpa HOM05D008367 ORTHO05D010529 2.7e-11 73.2 201 32.8
COL.COLO4_05894 Corchorus olitorius HOM05D008367 ORTHO05D010529 4.6e-11 72.4 213 30.5
MELO3C006420.2 Cucumis melo HOM05D007526 ORTHO05D009350 1.0e-10 71.2 212 32.1
Rhsim13G0035000 Rhododendron simsii HOM05D008367 ORTHO05D010529 1.0e-10 71.2 226 31.9
EL10Ac3g05005 Beta vulgaris HOM05D007526 ORTHO05D009350 1.3e-10 70.9 229 30.1
Medtr1g042820 Medicago truncatula HOM05D007526 ORTHO05D009350 2.3e-10 70.1 217 29.0
Thecc.04G255400 Theobroma cacao HOM05D007526 ORTHO05D009350 2.3e-10 70.1 218 32.6
CAN.G896.7 Capsicum annuum HOM05D008367 ORTHO05D010529 3.0e-10 69.7 206 32.5
DCAR_027319 Daucus carota HOM05D007526 ORTHO05D009350 3.0e-10 69.7 207 30.9
Psat6g104840 Pisum sativum HOM05D007526 ORTHO05D009350 3.0e-10 69.7 215 33.5
CDE02G1593 Ceratophyllum demersum HOM05D045424 ORTHO05D009350 5.1e-10 68.9 225 33.3
Lalb_Chr01g0012251 Lupinus albus HOM05D008367 ORTHO05D010529 6.7e-10 68.6 193 31.1
Sabra02G0030800 Salix brachista HOM05D008367 ORTHO05D010529 6.7e-10 68.6 217 29.5
Thecc.01G258200 Theobroma cacao HOM05D008367 ORTHO05D010529 6.7e-10 68.6 197 33.0
TPR.G25185 Trifolium pratense HOM05D007526 ORTHO05D009350 6.7e-10 68.6 213 26.8
Actinidia27694 Actinidia chinensis HOM05D008367 ORTHO05D010529 1.1e-09 67.8 183 31.1
Haze_24631 Corylus avellana HOM05D008367 ORTHO05D010529 1.1e-09 67.8 192 33.9
Medtr7g096950 Medicago truncatula HOM05D008367 ORTHO05D010529 1.5e-09 67.4 202 30.7
Sed0008521 Sechium edule HOM05D007526 ORTHO05D009350 1.5e-09 67.4 228 31.1
CiPaw.03G264200 Carya illinoinensis HOM05D008367 ORTHO05D010529 2.5e-09 66.6 204 33.3
Hma1.2p1_0576F.1_g182070 Hydrangea macrophylla HOM05D008367 ORTHO05D010529 2.5e-09 66.6 216 30.6
Lj5g0022077 Lotus japonicus HOM05D007526 ORTHO05D009350 5.7e-09 65.5 218 27.5
Ciclev10022407m.g Citrus clementina HOM05D008367 ORTHO05D010529 7.4e-09 65.1 215 30.2
THA.LOC104808623 Tarenaya hassleriana HOM05D007526 ORTHO05D009350 7.4e-09 65.1 210 30.0
CARHR099230 Cardamine hirsuta HOM05D007526 ORTHO05D009350 1.3e-08 64.3 219 29.2
Sabra05G0173000 Salix brachista HOM05D008367 ORTHO05D010529 1.6e-08 63.9 198 31.8
Nitab4.5_0000470g0140 Nicotiana tabacum HOM05D008367 ORTHO05D010529 2.2e-08 63.5 207 31.4
Sp3g20910 Schrenkiella parvula HOM05D007526 ORTHO05D009350 3.7e-08 62.8 212 30.7
Ah.04g155760 Amaranthus hybridus HOM05D007526 ORTHO05D009350 4.8e-08 62.4 230 30.9
Phvul.007G108400 Phaseolus vulgaris HOM05D007526 ORTHO05D009350 4.8e-08 62.4 212 31.1
Sabra08G0127400 Salix brachista HOM05D007526 ORTHO05D009350 6.3e-08 62.0 199 28.6
Cfa002424 Carpinus fangiana HOM05D008367 ORTHO05D010529 1.1e-07 61.2 199 32.2
Glyma.10G180900 Glycine max HOM05D007526 ORTHO05D009350 1.1e-07 61.2 212 30.7
RcHm_v2.0_Chr6g0288121 Rosa chinensis HOM05D008367 ORTHO05D010529 1.1e-07 61.2 190 28.9
Actinidia25788 Actinidia chinensis HOM05D008367 ORTHO05D010529 1.4e-07 60.8 213 30.5
Actinidia01843 Actinidia chinensis HOM05D007526 ORTHO05D009350 1.8e-07 60.5 44 65.9
Actinidia09550 Actinidia chinensis HOM05D008367 ORTHO05D010529 1.8e-07 60.5 213 28.2
Thhalv10026764m.g Eutrema salsugineum HOM05D007526 ORTHO05D009350 1.8e-07 60.5 212 27.8
FAN20G2986 Fragaria x ananassa HOM05D004208 ORTHO05D005156 1.8e-07 60.5 211 28.0
C04p41350 Brassica napus HOM05D007526 ORTHO05D009350 3.1e-07 59.7 226 27.9
AUR62015571 Chenopodium quinoa HOM05D007526 ORTHO05D009350 3.1e-07 59.7 219 30.6
Manes.13G034100 Manihot esculenta HOM05D008367 ORTHO05D010529 3.1e-07 59.7 205 32.2
arahy.Tifrunner.gnm1.ann1.582VFN Arachis hypogaea HOM05D007526 ORTHO05D009350 4.1e-07 59.3 220 27.7
Dinv27054 Davidia involucrata HOM05D007526 ORTHO05D009350 4.1e-07 59.3 40 72.5
Gohir.D07G155080 Gossypium hirsutum HOM05D008367 ORTHO05D010529 4.1e-07 59.3 201 30.3
Gorai.001G177400 Gossypium raimondii HOM05D008367 ORTHO05D010529 4.1e-07 59.3 201 30.3
arahy.Tifrunner.gnm1.ann1.STCN49 Arachis hypogaea HOM05D007526 ORTHO05D009350 5.3e-07 58.9 220 27.7
A04p07660 Brassica napus HOM05D007526 ORTHO05D009350 6.9e-07 58.5 226 27.4
Cpa.g.sc165.10 Carica papaya HOM05D008367 ORTHO05D010529 6.9e-07 58.5 199 32.2
FAN27G3501 Fragaria x ananassa HOM05D004208 ORTHO05D005156 6.9e-07 58.5 204 27.5
Psat3g056920 Pisum sativum HOM05D008367 ORTHO05D010529 9.0e-07 58.2 192 30.7
ATR0736G129 Amborella trichopoda HOM05D007526 ORTHO05D009350 1.2e-06 57.8 256 27.0
Ca_08710_v3 Cicer arietinum L. HOM05D008367 ORTHO05D010529 1.2e-06 57.8 213 29.6
Lsat_1_v5_gn_3_120620 Lactuca sativa HOM05D064852 ORTHO05D009350 1.2e-06 57.8 149 34.2
BcaC02g09320 Brassica carinata HOM05D007526 ORTHO05D009350 1.5e-06 57.4 226 27.4
BolC4t25713H Brassica oleracea HOM05D007526 ORTHO05D009350 1.5e-06 57.4 226 27.4
BraA04t16457Z Brassica rapa HOM05D007526 ORTHO05D009350 2.0e-06 57.0 209 26.8
Hma1.2p1_0267F.1_g107260 Hydrangea macrophylla HOM05D007526 ORTHO05D009350 2.6e-06 56.6 81 40.7
MD05G1197200 Malus domestica HOM05D008367 ORTHO05D010529 2.6e-06 56.6 202 26.2
AL7G41840 Arabidopsis lyrata HOM05D007526 ORTHO05D009350 3.4e-06 56.2 225 26.2
Glyma.19G164700 Glycine max HOM05D008367 ORTHO05D010529 3.4e-06 56.2 219 31.1
Rhsim01G0263900 Rhododendron simsii HOM05D008367 ORTHO05D010529 3.4e-06 56.2 217 29.5
Migut.G00517 Erythranthe guttata HOM05D007526 ORTHO05D009350 4.5e-06 55.8 108 35.2
Glyma.03G163200 Glycine max HOM05D008367 ORTHO05D010529 4.5e-06 55.8 214 31.8
Gohir.A07G148700 Gossypium hirsutum HOM05D008367 ORTHO05D010529 4.5e-06 55.8 194 29.9
Phvul.001G161100 Phaseolus vulgaris HOM05D008367 ORTHO05D010529 4.5e-06 55.8 208 32.2
BcaB02g08612 Brassica carinata HOM05D007526 ORTHO05D009350 5.9e-06 55.5 225 27.6
Ca_08676_v3 Cicer arietinum L. HOM05D008367 ORTHO05D010529 7.7e-06 55.1 207 29.0
Ca_08702_v3 Cicer arietinum L. HOM05D008367 ORTHO05D010529 7.7e-06 55.1 216 29.2
QL06p018008 Quercus lobata HOM05D007526 ORTHO05D009350 1.0e-05 54.7 145 35.9


User provided reference genes

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