Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G00210 Aquilegia oxysepala HOM05D007620 ORTHO05D009568 1.3e-95 354.8 171 100.0
Hma1.2p1_1512F.1_g287900 Hydrangea macrophylla HOM05D007620 ORTHO05D009568 1.8e-44 184.9 172 59.3
Nn1g02811 Nelumbo nucifera HOM05D007620 ORTHO05D009568 2.3e-44 184.5 173 57.8
TAR362G1297 Trochodendron aralioides HOM05D007620 ORTHO05D009568 1.2e-43 182.2 172 58.7
Dinv24674 Davidia involucrata HOM05D007620 ORTHO05D009568 1.5e-43 181.8 176 57.4
PSO210G6557 Papaver somniferum HOM05D007620 ORTHO05D009568 2.6e-43 181.0 174 58.0
Lsat_1_v5_gn_8_24880 Lactuca sativa HOM05D007620 ORTHO05D009568 2.9e-42 177.6 162 57.4
Haze_04424 Corylus avellana HOM05D007620 ORTHO05D009568 2.4e-41 174.5 175 56.0
QL03p030456 Quercus lobata HOM05D007620 ORTHO05D009568 1.2e-40 172.2 173 56.6
Thecc.05G270800 Theobroma cacao HOM05D007620 ORTHO05D009568 1.2e-40 172.2 149 59.1
Gohir.D11G257601 Gossypium hirsutum HOM05D007620 ORTHO05D009568 6.6e-39 166.4 150 57.3
Gorai.007G275900 Gossypium raimondii HOM05D007620 ORTHO05D009568 6.6e-39 166.4 150 57.3
CDE04G2606 Ceratophyllum demersum HOM05D007620 ORTHO05D009568 7.3e-38 162.9 172 51.7
Duzib177G1032 Durio zibethinus HOM05D007620 ORTHO05D009568 2.1e-37 161.4 138 58.7
CSS0021218 Camellia sinensis var. sinensis HOM05D007620 ORTHO05D009568 6.2e-37 159.8 175 53.7
CSS0034254 Camellia sinensis var. sinensis HOM05D007620 ORTHO05D009568 6.2e-37 159.8 175 53.7
FAN14G2205 Fragaria x ananassa HOM05D004964 ORTHO05D005918 1.8e-36 158.3 177 52.0
CSS0013452 Camellia sinensis var. sinensis HOM05D007620 ORTHO05D009568 2.3e-36 157.9 175 52.6
MELO3C010128.2 Cucumis melo HOM05D007620 ORTHO05D009568 2.3e-36 157.9 128 59.4
CsaV3_1G045110 Cucumis sativus L. HOM05D007620 ORTHO05D009568 3.4e-35 154.1 128 58.6
ClCG03G009720 Citrullus lanatus HOM05D007620 ORTHO05D009568 7.5e-35 152.9 110 64.5
MD04G1230300 Malus domestica HOM05D007620 ORTHO05D009568 2.2e-34 151.4 153 54.2
Sed0010835 Sechium edule HOM05D007620 ORTHO05D009568 2.9e-34 151.0 133 56.4
C05p62520 Brassica napus HOM05D007620 ORTHO05D009568 3.7e-34 150.6 152 53.3
Lj2C43T7 Lonicera japonica HOM05D007620 ORTHO05D009568 3.7e-34 150.6 161 51.6
A05p42800 Brassica napus HOM05D007620 ORTHO05D009568 4.9e-34 150.2 152 53.9
BraA05t22972Z Brassica rapa HOM05D007620 ORTHO05D009568 4.9e-34 150.2 152 53.9
THA.LOC104801727 Tarenaya hassleriana HOM05D007620 ORTHO05D009568 6.4e-34 149.8 171 46.2
BolC5t34907H Brassica oleracea HOM05D007620 ORTHO05D009568 1.1e-33 149.1 152 53.3
Ciclev10019446m.g Citrus clementina HOM05D007620 ORTHO05D009568 1.9e-33 148.3 177 50.3
Oeu026591.1 Olea europaea HOM05D007620 ORTHO05D009568 1.9e-33 148.3 162 48.8
Gohir.A11G247300 Gossypium hirsutum HOM05D007620 ORTHO05D009568 1.2e-32 145.6 97 70.1
Atru.chr2.986 Acer truncatum HOM05D007620 ORTHO05D009568 2.7e-32 144.4 180 48.3
Psat0s1841g0080 Pisum sativum HOM05D007620 ORTHO05D009568 3.5e-32 144.1 158 47.5
CANSAT21G0311 Cannabis sativa HOM05D007620 ORTHO05D009568 6.0e-32 143.3 144 52.1
EL10Ac4g09018 Beta vulgaris HOM05D007620 ORTHO05D009568 1.3e-31 142.1 148 50.7
Migut.F00879 Erythranthe guttata HOM05D007620 ORTHO05D009568 3.0e-31 141.0 152 50.0
Solyc04g010060.2 Solanum lycopersicum HOM05D007620 ORTHO05D009568 3.9e-31 140.6 167 49.1
Glyma.20G222800 Glycine max HOM05D007620 ORTHO05D009568 1.5e-30 138.7 180 45.0
GSVIVG01023503001 Vitis vinifera HOM05D007620 ORTHO05D009568 1.2e-29 135.6 170 47.1
Cc02_g08810 Coffea canephora HOM05D007620 ORTHO05D009568 1.6e-29 135.2 153 49.0
COL.COLO4_15485 Corchorus olitorius HOM05D007620 ORTHO05D009568 1.6e-29 135.2 98 64.3
Cfa006355 Carpinus fangiana HOM05D007620 ORTHO05D009568 2.1e-29 134.8 175 46.9
VMungo0720G2663 Vigna mungo HOM05D007620 ORTHO05D009568 2.8e-29 134.4 111 56.8
Glyma.10G166400 Glycine max HOM05D007620 ORTHO05D009568 6.2e-29 133.3 172 46.5
Potri.019G019300 Populus trichocarpa HOM05D007620 ORTHO05D009568 1.1e-28 132.5 178 44.4
Sc09g0004220 Simmondsia chinensis HOM05D007620 ORTHO05D009568 1.8e-28 131.7 162 45.7
Phvul.008G151824 Phaseolus vulgaris HOM05D007620 ORTHO05D009568 2.3e-28 131.3 175 43.4
ATR0736G141 Amborella trichopoda HOM05D007620 ORTHO05D009568 3.1e-28 131.0 101 60.4
RcHm_v2.0_Chr3g0449651 Rosa chinensis HOM05D007620 ORTHO05D009568 6.8e-28 129.8 182 47.3
Lj2C43T8 Lonicera japonica HOM05D007620 ORTHO05D009568 8.9e-28 129.4 175 44.6
Sabra13G0043000 Salix brachista HOM05D007620 ORTHO05D009568 1.2e-27 129.0 174 44.8
FAN02G1272 Fragaria x ananassa HOM05D004964 ORTHO05D005918 1.3e-26 125.6 177 45.8
FAN05G4025 Fragaria x ananassa HOM05D004964 ORTHO05D005918 1.3e-26 125.6 177 45.2
FAN05G4826 Fragaria x ananassa HOM05D004964 ORTHO05D005918 1.3e-26 125.6 177 45.2
FvH4_6g01920 Fragaria vesca HOM05D007620 ORTHO05D009568 2.9e-26 124.4 177 45.2
CSS0031974 Camellia sinensis var. sinensis HOM05D007620 ORTHO05D009568 8.4e-26 122.9 172 46.5
Psat6g139880 Pisum sativum HOM05D007620 ORTHO05D009568 2.1e-24 118.2 201 38.8
Manes.08G053900 Manihot esculenta HOM05D007620 ORTHO05D009568 2.7e-24 117.9 135 47.4
Potri.013G047000 Populus trichocarpa HOM05D007620 ORTHO05D009568 3.5e-24 117.5 178 41.0
Lalb_Chr06g0168291 Lupinus albus HOM05D007620 ORTHO05D009568 6.0e-24 116.7 140 47.1
MD12G1247400 Malus domestica HOM05D007620 ORTHO05D009568 2.3e-23 114.8 159 44.7
DCAR_023086 Daucus carota HOM05D007620 ORTHO05D009568 3.9e-23 114.0 127 52.0
PGR004G2089 Punica granatum HOM05D007620 ORTHO05D009568 5.1e-23 113.6 85 69.4
Ca_09448_v3 Cicer arietinum L. HOM05D007620 ORTHO05D009568 8.6e-23 112.8 167 40.1
SGA_v2.0_scaffold13G06478 Striga asiatica HOM05D007620 ORTHO05D009568 8.6e-23 112.8 103 53.4
ECA233G5729 Erigeron canadensis HOM05D007620 ORTHO05D009568 1.5e-22 112.1 76 69.7
Sp3g03610 Schrenkiella parvula HOM05D007620 ORTHO05D009568 1.9e-22 111.7 176 38.1
Lalb_Chr21g0311191 Lupinus albus HOM05D007620 ORTHO05D009568 2.5e-22 111.3 141 46.8
HPP92_005407 Vanilla planifolia HOM05D007620 ORTHO05D009568 3.3e-22 110.9 108 48.1
Peaxi162Scf00528g00227 Petunia axillaris HOM05D007620 ORTHO05D009568 7.3e-22 109.8 165 39.4
MD12G1247200 Malus domestica HOM05D007620 ORTHO05D009568 1.2e-21 109.0 98 58.2
PGSC0003DMG400011475 Solanum tuberosum HOM05D007620 ORTHO05D009568 1.2e-21 109.0 162 41.4
Lj5g0020911 Lotus japonicus HOM05D007620 ORTHO05D009568 6.2e-21 106.7 73 65.8
Eucgr.H04228 Eucalyptus grandis HOM05D007620 ORTHO05D009568 1.1e-20 105.9 124 50.8
Aa31LG5G15170 Aethionema arabicum HOM05D007620 ORTHO05D009568 2.4e-20 104.8 112 47.3
Medtr1g080110 Medicago truncatula HOM05D007620 ORTHO05D009568 3.1e-20 104.4 83 56.6
AL3G14890 Arabidopsis lyrata HOM05D007620 ORTHO05D009568 1.5e-19 102.1 147 40.1
Carub.0003s0393 Capsella rubella HOM05D007620 ORTHO05D009568 1.5e-19 102.1 110 48.2
AT3G04760 Arabidopsis thaliana HOM05D007620 ORTHO05D009568 2.0e-19 101.7 114 46.5
CARHR079010 Cardamine hirsuta HOM05D007620 ORTHO05D009568 1.7e-18 98.6 110 47.3
CAN.G358.141 Capsicum annuum HOM05D007620 ORTHO05D009568 2.2e-18 98.2 156 42.3
Lj1g0023548 Lotus japonicus HOM05D007620 ORTHO05D009568 6.4e-18 96.7 81 54.3
SalBow6G2000 Salvia bowleyana HOM05D007620 ORTHO05D009568 1.1e-17 95.9 73 57.5
Glyma.03G251200 Glycine max HOM05D007620 ORTHO05D009568 2.3e-15 88.2 80 52.5
PGR004G1481 Punica granatum HOM05D007620 ORTHO05D009568 3.9e-15 87.4 69 63.8
TPR.G22332 Trifolium pratense HOM05D007620 ORTHO05D009568 1.1e-14 85.9 72 54.2
AUR62004839 Chenopodium quinoa HOM05D007620 ORTHO05D009568 5.6e-14 83.6 137 38.0
AUR62040929 Chenopodium quinoa HOM05D007620 ORTHO05D009568 5.6e-14 83.6 137 38.7
Ah.06g191910 Amaranthus hybridus HOM05D007620 ORTHO05D009568 7.3e-14 83.2 117 41.0
Prupe.6G350200 Prunus persica HOM05D007620 ORTHO05D009568 1.4e-12 79.0 75 53.3
Psat0s1841g0040 Pisum sativum HOM05D007620 ORTHO05D009568 4.0e-12 77.4 64 51.6
CDE01G0171 Ceratophyllum demersum HOM05D007620 ORTHO05D009568 2.6e-11 74.7 122 39.3
Actinidia10267 Actinidia chinensis HOM05D006739 ORTHO05D008402 1.2e-08 65.9 132 36.4
Thhalv10022408m.g Eutrema salsugineum HOM05D007620 ORTHO05D009568 1.2e-08 65.9 44 68.2
Hund26855 Selenicereus undatus HOM05D006739 ORTHO05D008402 1.3e-07 62.4 95 42.1
Sopen04g005200 Solanum pennellii HOM05D007620 ORTHO05D009568 1.3e-07 62.4 45 62.2
Nitab4.5_0006737g0010 Nicotiana tabacum HOM05D007620 ORTHO05D009568 2.3e-07 61.6 42 66.7
Nitab4.5_0003780g0130 Nicotiana tabacum HOM05D007620 ORTHO05D009568 1.1e-06 59.3 42 64.3
arahy.Tifrunner.gnm1.ann1.M3C1JT Arachis hypogaea HOM05D006739 ORTHO05D008402 4.3e-06 57.4 100 36.0
RcHm_v2.0_Chr7g0226411 Rosa chinensis HOM05D009519 ORTHO05D010307 7.4e-06 56.6 90 35.6


User provided reference genes

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