Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G00188 Aquilegia oxysepala HOM05D008213 ORTHO05D009787 7.7e-250 866.7 438 100.0
TAR362G1061 Trochodendron aralioides HOM05D008213 ORTHO05D009787 1.3e-39 168.3 462 32.9
Dinv44200 Davidia involucrata HOM05D008213 ORTHO05D009787 2.7e-37 160.6 468 31.8
Hma1.2p1_0754F.1_g213080 Hydrangea macrophylla HOM05D008213 ORTHO05D009787 2.6e-24 117.5 427 28.6
Thecc.04G185000 Theobroma cacao HOM05D008213 ORTHO05D009787 3.4e-24 117.1 446 30.9
QL10p048331 Quercus lobata HOM05D008213 ORTHO05D009787 6.1e-21 106.3 459 28.3
CiPaw.01G101800 Carya illinoinensis HOM05D008213 ORTHO05D009787 2.3e-20 104.4 420 29.5
Manes.11G119400 Manihot esculenta HOM05D008213 ORTHO05D009787 8.8e-20 102.4 416 27.2
Duzib151G0756 Durio zibethinus HOM05D008213 ORTHO05D009787 2.2e-18 97.8 308 30.8
Gohir.D02G016500 Gossypium hirsutum HOM05D008213 ORTHO05D009787 6.3e-18 96.3 265 31.3
GSVIVG01010744001 Vitis vinifera HOM05D008213 ORTHO05D009787 1.8e-17 94.7 415 28.2
Potri.007G127200 Populus trichocarpa HOM05D008213 ORTHO05D009787 6.9e-17 92.8 463 27.6
Gorai.005G020000 Gossypium raimondii HOM05D008213 ORTHO05D009787 2.0e-16 91.3 232 31.0
RcHm_v2.0_Chr4g0407081 Rosa chinensis HOM05D008213 ORTHO05D009787 1.7e-15 88.2 395 24.6
Gohir.A02G015000 Gossypium hirsutum HOM05D007318 ORTHO05D009289 5.0e-15 86.7 260 32.3
Prupe.1G190600 Prunus persica HOM05D008213 ORTHO05D009787 1.1e-14 85.5 403 26.1
Sabra07G0103200 Salix brachista HOM05D008213 ORTHO05D009787 3.2e-14 84.0 273 30.4
C04p18480 Brassica napus HOM05D008213 ORTHO05D009787 6.1e-13 79.7 195 30.8
BcaC02g11256 Brassica carinata HOM05D008213 ORTHO05D009787 7.9e-13 79.3 195 30.8
BolC4t23398H Brassica oleracea HOM05D008213 ORTHO05D009787 7.9e-13 79.3 195 30.8
THA.LOC104826192 Tarenaya hassleriana HOM05D008213 ORTHO05D009787 2.3e-12 77.8 199 32.2
CSS0004350 Camellia sinensis var. sinensis HOM05D008213 ORTHO05D009787 5.1e-12 76.6 401 26.7
Carub.0004s1279 Capsella rubella HOM05D008213 ORTHO05D009787 5.1e-12 76.6 439 25.7
CARHR125120 Cardamine hirsuta HOM05D008213 ORTHO05D009787 6.7e-12 76.3 430 26.0
AT1G05894 Arabidopsis thaliana HOM05D008213 ORTHO05D009787 1.1e-11 75.5 414 25.8
Ah.07g201850 Amaranthus hybridus HOM05D022167 ORTHO05D009787 2.0e-11 74.7 178 30.9
Ciclev10023340m.g Citrus clementina HOM05D008213 ORTHO05D009787 7.4e-11 72.8 182 33.5
Aa31LG1G8440 Aethionema arabicum HOM05D008213 ORTHO05D009787 2.2e-10 71.2 476 25.0
AL1G15840 Arabidopsis lyrata HOM05D008213 ORTHO05D009787 2.8e-10 70.9 409 26.7
Carub.0001s0526 Capsella rubella HOM05D008213 ORTHO05D009787 2.8e-10 70.9 468 25.0
A05p14130 Brassica napus HOM05D008213 ORTHO05D009787 3.7e-10 70.5 485 24.5
BraA05t20342Z Brassica rapa HOM05D008213 ORTHO05D009787 3.7e-10 70.5 485 24.5
DCAR_017617 Daucus carota HOM05D008213 ORTHO05D009787 3.7e-10 70.5 295 28.8
AL4G26740 Arabidopsis lyrata HOM05D008213 ORTHO05D009787 6.3e-10 69.7 450 24.4
BcaB02g10392 Brassica carinata HOM05D008213 ORTHO05D009787 6.3e-10 69.7 190 29.5
BcaB06g28538 Brassica carinata HOM05D008213 ORTHO05D009787 6.3e-10 69.7 197 28.4
BcaC02g11257 Brassica carinata HOM05D008213 ORTHO05D009787 6.3e-10 69.7 228 27.6
MBI08_g22655_MAGBIO Magnolia biondii HOM05D008213 ORTHO05D009787 6.3e-10 69.7 462 23.8
ATR0743G282 Amborella trichopoda HOM05D008213 ORTHO05D009787 8.2e-10 69.3 355 31.8
Sp4g13940 Schrenkiella parvula HOM05D008213 ORTHO05D009787 1.4e-09 68.6 439 25.1
arahy.Tifrunner.gnm1.ann1.JQ8CCA Arachis hypogaea HOM05D010840 ORTHO05D009787 1.8e-09 68.2 202 29.2
A08p36230 Brassica napus HOM05D008213 ORTHO05D009787 3.1e-09 67.4 199 31.2
BraA04t17943Z Brassica rapa HOM05D008213 ORTHO05D009787 3.1e-09 67.4 440 24.8
AT2G31480 Arabidopsis thaliana HOM05D008213 ORTHO05D009787 4.1e-09 67.0 435 24.6
arahy.Tifrunner.gnm1.ann1.0UQ2B1 Arachis hypogaea HOM05D010840 ORTHO05D009787 4.1e-09 67.0 202 28.7
Thhalv10017539m.g Eutrema salsugineum HOM05D008213 ORTHO05D009787 4.1e-09 67.0 446 24.0
A04p24240 Brassica napus HOM05D008213 ORTHO05D009787 7.0e-09 66.2 431 24.4
CARHR005430 Cardamine hirsuta HOM05D008213 ORTHO05D009787 9.1e-09 65.9 228 28.1
BcaB02g10393 Brassica carinata HOM05D008213 ORTHO05D009787 1.2e-08 65.5 255 27.5
Phvul.011G055300 Phaseolus vulgaris HOM05D010840 ORTHO05D009787 2.6e-08 64.3 193 31.1
HanXRQChr02g0058051 Helianthus annuus HOM05D008213 ORTHO05D009787 3.5e-08 63.9 177 28.8
Sp1g04730 Schrenkiella parvula HOM05D008213 ORTHO05D009787 4.5e-08 63.5 396 25.3
VMungo1080G1829 Vigna mungo HOM05D002632 ORTHO05D002881 7.7e-08 62.8 180 32.2
BcaC02g07992 Brassica carinata HOM05D008213 ORTHO05D009787 1.0e-07 62.4 431 24.6
C04p60980 Brassica napus HOM05D008213 ORTHO05D009787 1.0e-07 62.4 431 24.6
Glyma.12G053300 Glycine max HOM05D010840 ORTHO05D009787 1.0e-07 62.4 176 31.8
Ca_01266_v3 Cicer arietinum L. HOM05D010840 ORTHO05D009787 1.3e-07 62.0 187 29.9
AUR62002285 Chenopodium quinoa HOM05D022167 ORTHO05D009787 1.7e-07 61.6 208 26.9
Thhalv10009329m.g Eutrema salsugineum HOM05D008213 ORTHO05D009787 1.7e-07 61.6 472 25.0
BcaC07g36821 Brassica carinata HOM05D008213 ORTHO05D009787 2.9e-07 60.8 329 26.4
ECA233G5141 Erigeron canadensis HOM05D008213 ORTHO05D009787 2.9e-07 60.8 311 25.4
AUR62015410 Chenopodium quinoa HOM05D022167 ORTHO05D009787 3.8e-07 60.5 208 27.9
Glyma.15G030900 Glycine max HOM05D010840 ORTHO05D009787 3.8e-07 60.5 162 32.1
BolC8t47021H Brassica oleracea HOM05D008213 ORTHO05D009787 5.0e-07 60.1 397 25.2
BraA08t35527Z Brassica rapa HOM05D008213 ORTHO05D009787 5.0e-07 60.1 288 26.4
Sc13g0006830 Simmondsia chinensis HOM05D022167 ORTHO05D009787 8.5e-07 59.3 220 29.5
Cpa.g.sc71.7 Carica papaya HOM05D008213 ORTHO05D009787 1.1e-06 58.9 374 23.8
PGR142G1601 Punica granatum HOM05D008213 ORTHO05D009787 1.9e-06 58.2 390 24.6
ECA248G0875 Erigeron canadensis HOM05D000554 ORTHO05D000860 2.5e-06 57.8 189 29.1
Glyma.11G128800 Glycine max HOM05D010840 ORTHO05D009787 4.2e-06 57.0 286 29.7
C08p02290 Brassica napus HOM05D008213 ORTHO05D009787 7.2e-06 56.2 398 24.9
COL.COLO4_24404 Corchorus olitorius HOM05D008213 ORTHO05D009787 7.2e-06 56.2 313 26.2


User provided reference genes

Program Settings