Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G00154 Aquilegia oxysepala HOM05D006824 ORTHO05D008779 1.7e-140 502.7 249 100.0
TAR362G0347 Trochodendron aralioides HOM05D006824 ORTHO05D008779 1.2e-95 353.6 246 71.1
Actinidia38928 Actinidia chinensis HOM05D006824 ORTHO05D008779 1.9e-88 329.7 225 68.0
CSS0012922 Camellia sinensis var. sinensis HOM05D006824 ORTHO05D008779 1.9e-88 329.7 212 72.2
CSS0029100 Camellia sinensis var. sinensis HOM05D006824 ORTHO05D008779 1.9e-88 329.7 212 72.2
Dinv04348 Davidia involucrata HOM05D006824 ORTHO05D008779 2.5e-88 329.3 258 65.5
vmacro06000 Vaccinium macrocarpon HOM05D006824 ORTHO05D008779 2.8e-87 325.9 240 61.7
Rhsim03G0265800 Rhododendron simsii HOM05D006824 ORTHO05D008779 6.2e-87 324.7 237 65.0
GSVIVG01019144001 Vitis vinifera HOM05D006824 ORTHO05D008779 4.0e-86 322.0 209 72.2
PSO170G6807 Papaver somniferum HOM05D006824 ORTHO05D008779 2.0e-85 319.7 213 67.1
CDE09G0666 Ceratophyllum demersum HOM05D006824 ORTHO05D008779 5.8e-85 318.2 213 70.4
RcHm_v2.0_Chr3g0448181 Rosa chinensis HOM05D006824 ORTHO05D008779 5.8e-85 318.2 231 64.9
Lj8A196G47 Lonicera japonica HOM05D006824 ORTHO05D008779 7.5e-85 317.8 219 67.6
Prupe.6G359400 Prunus persica HOM05D006824 ORTHO05D008779 1.3e-84 317.0 243 63.4
MD12G1258900 Malus domestica HOM05D006824 ORTHO05D008779 2.9e-84 315.8 234 63.7
Atru.chr12.2132 Acer truncatum HOM05D006824 ORTHO05D008779 6.4e-84 314.7 230 63.9
CANSAT54G2581 Cannabis sativa HOM05D006824 ORTHO05D008779 4.1e-83 312.0 249 59.8
EL10Ac4g09985 Beta vulgaris HOM05D006824 ORTHO05D008779 1.6e-82 310.1 226 64.6
Haze_04530 Corylus avellana HOM05D006824 ORTHO05D008779 2.1e-82 309.7 236 64.0
Manes.14G158930 Manihot esculenta HOM05D006824 ORTHO05D008779 3.5e-82 308.9 222 64.4
Oeu010150.1 Olea europaea HOM05D006824 ORTHO05D008779 6.0e-82 308.1 228 63.2
FAN05G0802 Fragaria x ananassa HOM05D006824 ORTHO05D008779 7.8e-82 307.8 240 63.8
HanXRQChr11g0323941 Helianthus annuus HOM05D006824 ORTHO05D008779 2.3e-81 306.2 214 65.4
CiPaw.08G117600 Carya illinoinensis HOM05D006824 ORTHO05D008779 3.0e-81 305.8 217 66.4
CDE02G0053 Ceratophyllum demersum HOM05D006824 ORTHO05D008779 3.0e-81 305.8 226 65.5
Cc09_g03430 Coffea canephora HOM05D006824 ORTHO05D008779 3.0e-81 305.8 245 62.9
Thecc.05G206500 Theobroma cacao HOM05D006824 ORTHO05D008779 5.1e-81 305.1 230 63.9
Lsat_1_v5_gn_9_48761 Lactuca sativa HOM05D006824 ORTHO05D008779 1.9e-80 303.1 214 65.9
Duzib128G1599 Durio zibethinus HOM05D006824 ORTHO05D008779 9.5e-80 300.8 215 65.1
Nitab4.5_0005183g0030 Nicotiana tabacum HOM05D006824 ORTHO05D008779 9.5e-80 300.8 218 64.7
ECA232G2571 Erigeron canadensis HOM05D006824 ORTHO05D008779 1.6e-79 300.1 227 59.9
TWI14G0776 Tripterygium wilfordii HOM05D006824 ORTHO05D008779 2.1e-79 299.7 215 65.1
CAN.G694.18 Capsicum annuum HOM05D006824 ORTHO05D008779 2.8e-79 299.3 226 61.9
PGR031G0982 Punica granatum HOM05D006824 ORTHO05D008779 2.8e-79 299.3 232 59.5
Gohir.A02G138800 Gossypium hirsutum HOM05D006824 ORTHO05D008779 3.6e-79 298.9 203 68.0
Glyma.09G252100 Glycine max HOM05D006824 ORTHO05D008779 4.7e-79 298.5 220 62.3
PGSC0003DMG400023472 Solanum tuberosum HOM05D006824 ORTHO05D008779 6.2e-79 298.1 222 63.5
VMungo1383G3541 Vigna mungo HOM05D006824 ORTHO05D008779 6.2e-79 298.1 220 62.3
Glyma.18G240500 Glycine max HOM05D006824 ORTHO05D008779 8.1e-79 297.7 218 61.5
TPR.G28449 Trifolium pratense HOM05D006824 ORTHO05D008779 8.1e-79 297.7 239 58.2
COL.COLO4_19831 Corchorus olitorius HOM05D006824 ORTHO05D008779 1.1e-78 297.4 208 67.8
SGA_v2.0_scaffold13G06472 Striga asiatica HOM05D006824 ORTHO05D008779 1.1e-78 297.4 225 63.1
Gorai.003G050700 Gossypium raimondii HOM05D006824 ORTHO05D008779 1.4e-78 297.0 203 68.0
Phvul.008G055700 Phaseolus vulgaris HOM05D006824 ORTHO05D008779 1.4e-78 297.0 219 60.7
Potri.010G143000 Populus trichocarpa HOM05D006824 ORTHO05D008779 1.8e-78 296.6 230 60.9
Sed0011929 Sechium edule HOM05D006824 ORTHO05D008779 1.8e-78 296.6 232 61.6
Sopen05g034220 Solanum pennellii HOM05D006824 ORTHO05D008779 8.9e-78 294.3 231 61.5
ClCG11G010940 Citrullus lanatus HOM05D006824 ORTHO05D008779 1.2e-77 293.9 237 61.2
AUR62000332 Chenopodium quinoa HOM05D006824 ORTHO05D008779 1.5e-77 293.5 212 64.2
Lalb_Chr19g0126751 Lupinus albus HOM05D006824 ORTHO05D008779 1.5e-77 293.5 203 64.5
Sabra10G0110900 Salix brachista HOM05D006824 ORTHO05D008779 1.5e-77 293.5 226 61.9
AUR62006674 Chenopodium quinoa HOM05D006824 ORTHO05D008779 2.0e-77 293.1 212 63.7
DCAR_005505 Daucus carota HOM05D006824 ORTHO05D008779 2.6e-77 292.7 245 58.0
Eucgr.H01379 Eucalyptus grandis HOM05D006824 ORTHO05D008779 2.6e-77 292.7 233 59.2
SalBow3G1586 Salvia bowleyana HOM05D006824 ORTHO05D008779 5.8e-77 291.6 255 56.9
THA.LOC104813550 Tarenaya hassleriana HOM05D006824 ORTHO05D008779 7.6e-77 291.2 207 62.8
arahy.Tifrunner.gnm1.ann1.3Y20MY Arachis hypogaea HOM05D006824 ORTHO05D008779 2.2e-76 289.7 224 60.7
Migut.F01795 Erythranthe guttata HOM05D006824 ORTHO05D008779 2.2e-76 289.7 196 65.8
Medtr7g079530 Medicago truncatula HOM05D006824 ORTHO05D008779 2.2e-76 289.7 208 63.0
Psat3g104840 Pisum sativum HOM05D006824 ORTHO05D008779 2.2e-76 289.7 235 58.3
arahy.Tifrunner.gnm1.ann1.8HY0WZ Arachis hypogaea HOM05D006824 ORTHO05D008779 4.9e-76 288.5 224 60.3
FAN02G3690 Fragaria x ananassa HOM05D006824 ORTHO05D008779 4.9e-76 288.5 249 59.0
Ca_07965_v3 Cicer arietinum L. HOM05D006824 ORTHO05D008779 8.4e-76 287.7 237 57.4
CsaV3_2G009540 Cucumis sativus L. HOM05D006824 ORTHO05D008779 8.4e-76 287.7 233 58.8
AL2G41760 Arabidopsis lyrata HOM05D006824 ORTHO05D008779 2.4e-75 286.2 229 59.8
Nn1g09799 Nelumbo nucifera HOM05D006824 ORTHO05D008779 3.2e-75 285.8 200 67.5
FAN14G1847 Fragaria x ananassa HOM05D006824 ORTHO05D008779 7.1e-75 284.6 232 62.1
Aa31LG4G40 Aethionema arabicum HOM05D006824 ORTHO05D008779 1.2e-74 283.9 226 57.5
Ciclev10012732m.g Citrus clementina HOM05D006824 ORTHO05D008779 7.8e-74 281.2 185 69.7
C06p28710 Brassica napus HOM05D006824 ORTHO05D008779 1.0e-73 280.8 237 57.4
Thhalv10019052m.g Eutrema salsugineum HOM05D006824 ORTHO05D008779 3.0e-73 279.3 227 57.7
BraA07t30276Z Brassica rapa HOM05D006824 ORTHO05D008779 3.9e-73 278.9 221 59.3
A07p26320 Brassica napus HOM05D006824 ORTHO05D008779 5.1e-73 278.5 221 59.3
Carub.0002s2772 Capsella rubella HOM05D006824 ORTHO05D008779 4.3e-72 275.4 219 59.4
Sp5g35980 Schrenkiella parvula HOM05D006824 ORTHO05D008779 7.3e-72 274.6 227 57.3
HPP92_009935 Vanilla planifolia HOM05D006824 ORTHO05D008779 7.3e-72 274.6 177 69.5
BolC6t38040H Brassica oleracea HOM05D006824 ORTHO05D008779 1.1e-70 270.8 262 52.7
MBI08_g02107_MAGBIO Magnolia biondii HOM05D006824 ORTHO05D008779 4.0e-70 268.9 175 70.3
Lj1g0017863 Lotus japonicus HOM05D006824 ORTHO05D008779 5.2e-70 268.5 200 62.5
AT1G79790 Arabidopsis thaliana HOM05D006824 ORTHO05D008779 2.0e-69 266.5 253 52.2
CARHR049030 Cardamine hirsuta HOM05D006824 ORTHO05D008779 2.0e-69 266.5 228 57.5
Cpa.g.sc123.9 Carica papaya HOM05D006824 ORTHO05D008779 5.8e-69 265.0 202 63.4
Ah.06g195550 Amaranthus hybridus HOM05D006824 ORTHO05D008779 2.4e-67 259.6 231 59.7
MELO3C008753.2 Cucumis melo HOM05D006824 ORTHO05D008779 1.0e-65 254.2 164 67.7
MELO3C025302.2 Cucumis melo HOM05D006824 ORTHO05D008779 3.9e-65 252.3 197 58.9
SMO361G0474 Selaginella moellendorffii HOM05D006824 ORTHO05D008779 2.5e-64 249.6 192 59.4
AagrBONN_evm.TU.Sc2ySwM_344.3559 Anthoceros agrestis HOM05D006824 ORTHO05D008779 1.1e-62 244.2 194 57.7
Hma1.2p1_0171F.1_g075760 Hydrangea macrophylla HOM05D006824 ORTHO05D008779 4.0e-62 242.3 134 79.1
Pp3c3_9990 Physcomitrium patens HOM05D006824 ORTHO05D008779 1.5e-61 240.4 196 54.6
CBR_g54655 Chara braunii HOM05D006824 ORTHO05D008779 6.4e-60 235.0 193 54.9
Mapoly0002s0020 Marchantia polymorpha HOM05D006824 ORTHO05D008779 2.7e-58 229.6 193 51.3
FvH4_6g00710 Fragaria vesca HOM05D006824 ORTHO05D008779 7.9e-58 228.0 180 63.3
Gohir.D03G049300 Gossypium hirsutum HOM05D006824 ORTHO05D008779 2.5e-56 223.0 143 70.6
Nitab4.5_0009285g0020 Nicotiana tabacum HOM05D006824 ORTHO05D008779 4.3e-56 222.2 183 56.8
SalBow3G1143 Salvia bowleyana HOM05D006824 ORTHO05D008779 5.6e-56 221.9 168 62.5
Zm00001eb169290 Zea mays HOM05D006824 ORTHO05D008779 5.5e-51 205.3 154 61.0
Cre13.g563200 Chlamydomonas reinhardtii HOM05D006824 ORTHO05D008779 3.3e-48 196.1 198 49.0
MD04G1242100 Malus domestica HOM05D006824 ORTHO05D008779 6.9e-46 188.3 135 64.4
QL01p046721 Quercus lobata HOM05D006824 ORTHO05D008779 3.2e-43 179.5 121 67.8
Hund07329 Selenicereus undatus HOM05D006824 ORTHO05D008779 5.1e-41 172.2 226 42.0
Nitab4.5_0008294g0020 Nicotiana tabacum HOM05D006824 ORTHO05D008779 1.3e-39 167.5 215 46.5
PRCOL_00006210 Prasinoderma coloniale HOM05D006824 ORTHO05D008779 3.7e-39 166.0 220 39.5
arahy.Tifrunner.gnm1.ann1.EIZA4A Arachis hypogaea HOM05D006824 ORTHO05D008779 5.9e-37 158.7 104 65.4
arahy.Tifrunner.gnm1.ann1.JEI8NT Arachis hypogaea HOM05D006824 ORTHO05D008779 1.9e-32 143.7 95 64.2
FAN09G4644 Fragaria x ananassa HOM05D006824 ORTHO05D008779 2.0e-29 133.7 80 73.8
Solyc05g055820.3 Solanum lycopersicum HOM05D006824 ORTHO05D008779 9.7e-24 114.8 91 58.2
CARHR074720 Cardamine hirsuta HOM05D006824 ORTHO05D008779 5.5e-19 99.0 87 54.0
SEGI_14412 Sequoiadendron giganteum HOM05D006824 ORTHO05D008779 7.2e-19 98.6 56 76.8
ATR0824G111 Amborella trichopoda HOM05D006824 ORTHO05D008779 8.0e-18 95.1 93 50.5
MD04G1242000 Malus domestica HOM05D006824 ORTHO05D008779 8.0e-18 95.1 76 57.9
Psat3g104160 Pisum sativum HOM05D006824 ORTHO05D008779 3.9e-17 92.8 60 65.0
ATR0263G001 Amborella trichopoda HOM05D006824 ORTHO05D008779 2.6e-16 90.1 68 63.2
arahy.Tifrunner.gnm1.ann1.X7EDXL Arachis hypogaea HOM05D006824 ORTHO05D021501 4.8e-15 85.9 54 70.4
SEGI_33071 Sequoiadendron giganteum HOM05D006824 ORTHO05D008779 7.0e-14 82.0 66 57.6
FAN09G1422 Fragaria x ananassa HOM05D001170 ORTHO05D002759 2.1e-10 70.5 49 63.3
arahy.Tifrunner.gnm1.ann1.LN2II4 Arachis hypogaea HOM05D006661 ORTHO05D021501 2.7e-10 70.1 42 71.4
arahy.Tifrunner.gnm1.ann1.0X0W56 Arachis hypogaea HOM05D006824 ORTHO05D021501 6.1e-10 68.9 91 42.9
arahy.Tifrunner.gnm1.ann1.2JVF5K Arachis hypogaea HOM05D001175 ORTHO05D021501 6.1e-10 68.9 91 42.9
arahy.Tifrunner.gnm1.ann1.96LZZJ Arachis hypogaea HOM05D006824 ORTHO05D021501 6.1e-10 68.9 91 42.9
arahy.Tifrunner.gnm1.ann1.DM3ST4 Arachis hypogaea HOM05D006824 ORTHO05D021501 6.1e-10 68.9 91 42.9
Cpa.g.sc32.161 Carica papaya HOM05D006824 ORTHO05D008779 4.8e-07 59.3 33 72.7


User provided reference genes

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