Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G00102 Aquilegia oxysepala HOM05D006210 ORTHO05D007510 6.2e-205 717.2 363 100.0
TAR362G1053 Trochodendron aralioides HOM05D006210 ORTHO05D007510 4.7e-144 515.0 363 73.8
MBI10_g26060_MAGBIO Magnolia biondii HOM05D006210 ORTHO05D007510 3.1e-140 502.3 363 69.1
Nn1g03023 Nelumbo nucifera HOM05D006210 ORTHO05D007510 3.1e-140 502.3 363 70.2
GSVIVG01028451001 Vitis vinifera HOM05D006210 ORTHO05D007510 1.7e-138 496.5 363 69.4
QL09p042418 Quercus lobata HOM05D006210 ORTHO05D007510 4.3e-137 491.9 381 66.7
CiPaw.03G272200 Carya illinoinensis HOM05D006210 ORTHO05D007510 9.5e-137 490.7 365 68.2
Ciclev10020743m.g Citrus clementina HOM05D006210 ORTHO05D007510 4.7e-136 488.4 365 66.8
Potri.002G255300 Populus trichocarpa HOM05D006210 ORTHO05D007510 1.4e-135 486.9 364 69.2
Prupe.1G573100 Prunus persica HOM05D006210 ORTHO05D007510 5.2e-135 485.0 365 66.8
Actinidia30115 Actinidia chinensis HOM05D006210 ORTHO05D007510 9.8e-134 480.7 361 65.7
PSO210G7683 Papaver somniferum HOM05D006210 ORTHO05D007510 1.3e-133 480.3 367 67.3
Rhsim13G0040700 Rhododendron simsii HOM05D006210 ORTHO05D007510 2.9e-133 479.2 371 63.9
Thecc.01G247800 Theobroma cacao HOM05D006210 ORTHO05D007510 2.9e-133 479.2 363 65.6
PSO170G6901 Papaver somniferum HOM05D006210 ORTHO05D007510 4.9e-133 478.4 367 67.0
Glyma.13G127800 Glycine max HOM05D006210 ORTHO05D007510 1.1e-132 477.2 364 67.9
Thhalv10008004m.g Eutrema salsugineum HOM05D006210 ORTHO05D007510 2.4e-132 476.1 361 64.0
Sp1g02950 Schrenkiella parvula HOM05D006210 ORTHO05D007510 7.0e-132 474.6 361 63.4
FvH4_2g20260 Fragaria vesca HOM05D006210 ORTHO05D007510 9.2e-132 474.2 363 65.8
Atru.chr5.2084_Atru.chr5.2085 Acer truncatum HOM05D006210 ORTHO05D007510 6.0e-131 471.5 363 65.6
TWI18G1043 Tripterygium wilfordii HOM05D006210 ORTHO05D007510 1.3e-130 470.3 363 66.4
Gohir.D11G140400 Gossypium hirsutum HOM05D006210 ORTHO05D007510 1.7e-130 469.9 363 65.3
Duzib138G0227 Durio zibethinus HOM05D006210 ORTHO05D007510 8.6e-130 467.6 363 64.2
Phvul.007G154100 Phaseolus vulgaris HOM05D006210 ORTHO05D007510 8.6e-130 467.6 364 66.2
BraA09t42139Z Brassica rapa HOM05D006210 ORTHO05D007510 1.1e-129 467.2 382 61.0
Glyma.10G040900 Glycine max HOM05D006210 ORTHO05D007510 1.5e-129 466.8 364 65.7
Sed0025577 Sechium edule HOM05D006210 ORTHO05D007510 1.9e-129 466.5 363 64.2
BolC8t52775H Brassica oleracea HOM05D006210 ORTHO05D007510 4.3e-129 465.3 387 60.2
Eucgr.A01369 Eucalyptus grandis HOM05D006210 ORTHO05D007510 4.3e-129 465.3 363 65.8
Gohir.A11G134300 Gossypium hirsutum HOM05D006210 ORTHO05D007510 4.3e-129 465.3 363 64.7
Manes.13G038600 Manihot esculenta HOM05D006210 ORTHO05D007510 5.6e-129 464.9 364 65.4
Dinv43053 Davidia involucrata HOM05D006210 ORTHO05D007510 2.1e-128 463.0 340 70.3
CARHR003480 Cardamine hirsuta HOM05D006210 ORTHO05D007510 3.6e-128 462.2 361 62.9
Hma1.2p1_2051F.1_g312580 Hydrangea macrophylla HOM05D006210 ORTHO05D007510 3.6e-128 462.2 365 66.6
BcaC07g42211 Brassica carinata HOM05D006210 ORTHO05D007510 4.7e-128 461.8 363 62.3
TPR.G28794 Trifolium pratense HOM05D006210 ORTHO05D007510 4.7e-128 461.8 370 64.9
CANSAT01G0995 Cannabis sativa HOM05D006210 ORTHO05D007510 6.2e-128 461.5 364 64.6
Lalb_Chr21g0314151 Lupinus albus HOM05D006210 ORTHO05D007510 8.0e-128 461.1 377 63.9
CsaV3_3G028470 Cucumis sativus L. HOM05D006210 ORTHO05D007510 1.4e-127 460.3 361 63.2
MELO3C012833.2 Cucumis melo HOM05D006210 ORTHO05D007510 1.8e-127 459.9 363 63.1
SalBow5G1930 Salvia bowleyana HOM05D006210 ORTHO05D007510 1.8e-127 459.9 375 61.9
Lj5g0001397 Lotus japonicus HOM05D006210 ORTHO05D007510 4.0e-127 458.8 363 65.3
AL1G13730 Arabidopsis lyrata HOM05D006210 ORTHO05D007510 6.8e-127 458.0 361 62.3
Psat6g064440 Pisum sativum HOM05D006210 ORTHO05D007510 8.9e-127 457.6 364 65.4
Ca_09640_v3 Cicer arietinum L. HOM05D006210 ORTHO05D007510 1.5e-126 456.8 361 64.5
Lj1C76G7 Lonicera japonica HOM05D006210 ORTHO05D007510 2.6e-126 456.1 377 63.4
AT1G04130 Arabidopsis thaliana HOM05D006210 ORTHO05D007510 4.4e-126 455.3 361 62.0
C08p52480 Brassica napus HOM05D006210 ORTHO05D007510 5.8e-126 454.9 361 62.3
Hund18317 Selenicereus undatus HOM05D006210 ORTHO05D007510 5.8e-126 454.9 361 63.2
A09p68040 Brassica napus HOM05D006210 ORTHO05D007510 7.5e-126 454.5 361 62.9
Aa31LG1G20710 Aethionema arabicum HOM05D006210 ORTHO05D007510 1.3e-125 453.8 364 62.4
Carub.0001s0328 Capsella rubella HOM05D006210 ORTHO05D007510 1.7e-125 453.4 361 61.8
Cfa002496 Carpinus fangiana HOM05D006210 ORTHO05D007510 2.2e-125 453.0 338 69.8
CSS0033273 Camellia sinensis var. sinensis HOM05D006210 ORTHO05D007510 3.7e-125 452.2 372 62.9
FAN27G1100 Fragaria x ananassa HOM05D006210 ORTHO05D007510 3.7e-125 452.2 363 63.1
PGR031G0293 Punica granatum HOM05D006210 ORTHO05D007510 4.9e-125 451.8 361 62.0
PGSC0003DMG400007719 Solanum tuberosum HOM05D006210 ORTHO05D007510 8.3e-125 451.1 369 62.6
ECA247G1810 Erigeron canadensis HOM05D006210 ORTHO05D007510 4.1e-124 448.7 364 64.3
Oeu058104.1 Olea europaea HOM05D006210 ORTHO05D007510 2.1e-123 446.4 365 62.7
THA.LOC104801120 Tarenaya hassleriana HOM05D006210 ORTHO05D007510 4.6e-123 445.3 358 61.7
MSTRG.22887 Avicennia marina HOM05D006210 ORTHO05D007510 5.0e-122 441.8 365 62.5
Sopen09g025510 Solanum pennellii HOM05D006210 ORTHO05D007510 2.5e-121 439.5 368 61.4
HanXRQChr10g0280241 Helianthus annuus HOM05D006210 ORTHO05D007510 2.3e-119 433.0 364 61.5
Migut.O00355 Erythranthe guttata HOM05D006210 ORTHO05D007510 4.0e-119 432.2 361 61.5
VMungo0720G2771 Vigna mungo HOM05D006210 ORTHO05D007510 3.4e-118 429.1 364 62.6
COL.COLO4_37372 Corchorus olitorius HOM05D006210 ORTHO05D007510 1.7e-117 426.8 366 60.4
Cpa.g.sc87.54 Carica papaya HOM05D006210 ORTHO05D007510 2.2e-117 426.4 426 55.4
Sabra02G0194000 Salix brachista HOM05D006210 ORTHO05D007510 3.7e-117 425.6 386 61.1
BcaC07g42208 Brassica carinata HOM05D006210 ORTHO05D007510 3.2e-116 422.5 377 57.6
unitig_22.g6263 Utricularia gibba HOM05D006210 ORTHO05D007510 2.7e-115 419.5 376 58.0
ClCG00G001600 Citrullus lanatus HOM05D006210 ORTHO05D007510 4.6e-115 418.7 359 60.2
SEGI_04783 Sequoiadendron giganteum HOM05D006210 ORTHO05D007510 1.3e-114 417.2 364 57.7
Ah.15g091520 Amaranthus hybridus HOM05D006210 ORTHO05D007510 1.5e-113 413.7 361 59.3
arahy.Tifrunner.gnm1.ann1.J3R5E0 Arachis hypogaea HOM05D006210 ORTHO05D007510 1.1e-111 407.5 352 62.2
Zm00001eb057360 Zea mays HOM05D006210 ORTHO05D007510 1.4e-111 407.1 375 58.1
Nitab4.5_0000385g0060 Nicotiana tabacum HOM05D006210 ORTHO05D007510 8.9e-111 404.4 363 57.3
arahy.Tifrunner.gnm1.ann1.6WB007 Arachis hypogaea HOM05D006210 ORTHO05D007510 9.9e-110 401.0 361 58.4
AUR62025420 Chenopodium quinoa HOM05D006210 ORTHO05D007510 2.4e-108 396.4 362 57.2
Haze_24722 Corylus avellana HOM05D006210 ORTHO05D007510 1.2e-107 394.0 355 60.8
SGA_v2.0_scaffold382G50403 Striga asiatica HOM05D006210 ORTHO05D007510 1.2e-107 394.0 328 59.8
ClCG07G001460 Citrullus lanatus HOM05D006210 ORTHO05D007510 4.6e-107 392.1 387 55.6
ATR0723G059 Amborella trichopoda HOM05D006210 ORTHO05D007510 2.4e-103 379.8 361 57.9
arahy.Tifrunner.gnm1.ann1.GM89QY Arachis hypogaea HOM05D006210 ORTHO05D007510 2.0e-102 376.7 347 58.5
Peaxi162Scf00043g00235 Petunia axillaris HOM05D006210 ORTHO05D007510 4.2e-100 369.0 328 56.7
AUR62008821 Chenopodium quinoa HOM05D006210 ORTHO05D007510 2.4e-95 353.2 362 53.3
Cc01_g17680 Coffea canephora HOM05D006210 ORTHO05D007510 2.4e-95 353.2 366 53.8
MD10G1174300 Malus domestica HOM05D006210 ORTHO05D007510 3.5e-91 339.3 240 72.9
FAN24G1818 Fragaria x ananassa HOM05D006210 ORTHO05D007510 1.8e-90 337.0 242 72.3
RcHm_v2.0_Chr6g0286041 Rosa chinensis HOM05D006210 ORTHO05D007510 3.3e-89 332.8 240 71.7
DCAR_000557 Daucus carota HOM05D006210 ORTHO05D007510 4.3e-89 332.4 243 70.8
arahy.Tifrunner.gnm1.ann1.5C4SPF Arachis hypogaea HOM05D006210 ORTHO05D007510 7.4e-89 331.6 243 68.3
CAN.G119.7 Capsicum annuum HOM05D006210 ORTHO05D007510 1.2e-86 324.3 244 66.4
Prupe.8G213100 Prunus persica HOM05D006210 ORTHO05D007510 3.4e-86 322.8 363 52.9
Hma1.2p1_2051F.1_g312575 Hydrangea macrophylla HOM05D006210 ORTHO05D007510 4.5e-86 322.4 240 70.0
Solyc09g064380.3 Solanum lycopersicum HOM05D006210 ORTHO05D007510 4.2e-84 315.8 261 62.8
HPP92_025825 Vanilla planifolia HOM05D006210 ORTHO05D007510 4.6e-83 312.4 361 50.1
Pp3c19_11990 Physcomitrium patens HOM05D006210 ORTHO05D007510 4.3e-81 305.8 362 47.2
Mapoly0012s0146 Marchantia polymorpha HOM05D006210 ORTHO05D007510 1.6e-80 303.9 362 46.4
Gorai.007G150600 Gossypium raimondii HOM05D006210 ORTHO05D007510 9.0e-79 298.1 221 68.8
Lsat_1_v5_gn_9_11700 Lactuca sativa HOM05D006210 ORTHO05D007510 1.2e-78 297.7 294 57.1
AagrBONN_evm.TU.Sc2ySwM_228.4049__4050 Anthoceros agrestis HOM05D006210 ORTHO05D007510 7.6e-78 295.0 306 49.7
EL10Ac7g17713 Beta vulgaris HOM05D006210 ORTHO05D007510 2.2e-72 276.9 240 58.8
Nitab4.5_0000392g0100 Nicotiana tabacum HOM05D006210 ORTHO05D007510 4.1e-63 246.1 307 46.6
Os03g0750100 Oryza sativa ssp. japonica HOM05D006210 ORTHO05D007510 2.6e-57 226.9 267 49.1
CBR_g36953 Chara braunii HOM05D006210 ORTHO05D007510 2.2e-56 223.8 301 41.2
Sc05g0002800 Simmondsia chinensis HOM05D006210 ORTHO05D007510 2.9e-53 213.4 363 37.5
PRCOL_00004543 Prasinoderma coloniale HOM05D006210 ORTHO05D007510 2.7e-38 163.7 366 33.3
MD10G1174200 Malus domestica HOM05D006210 ORTHO05D007510 7.7e-38 162.2 120 64.2
DCAR_000556 Daucus carota HOM05D006210 ORTHO05D007510 1.6e-35 154.5 124 59.7
Cre08.g375650 Chlamydomonas reinhardtii HOM05D006210 ORTHO05D007510 4.7e-35 152.9 340 30.6
RcHm_v2.0_Chr6g0286031 Rosa chinensis HOM05D006210 ORTHO05D007510 5.2e-34 149.4 120 56.7
Hma1.2p1_0559F.1_g178660 Hydrangea macrophylla HOM05D000705 ORTHO05D007510 1.5e-33 147.9 101 71.3
MCO01G218 Micromonas commoda HOM05D006210 ORTHO05D007510 2.6e-33 147.1 365 31.2
CAN.G119.6 Capsicum annuum HOM05D006210 ORTHO05D007510 4.4e-33 146.4 120 55.8
HanXRQChr01g0013201 Helianthus annuus HOM05D006210 ORTHO05D007510 2.8e-32 143.7 161 49.1
MD05G1186500 Malus domestica HOM05D006210 ORTHO05D007510 4.2e-28 129.8 90 72.2
TAR349G0001 Trochodendron aralioides HOM05D006210 ORTHO05D007510 9.5e-28 128.6 187 46.5
vmacro02716 Vaccinium macrocarpon HOM05D006210 ORTHO05D007510 3.1e-23 113.6 97 54.6
Actinidia37561 Actinidia chinensis HOM05D006210 ORTHO05D007510 8.6e-21 105.5 95 55.8
Sc05g0002820 Simmondsia chinensis HOM05D006210 ORTHO05D007510 2.0e-17 94.4 91 47.3
MD05G1186300 Malus domestica HOM05D006210 ORTHO05D007510 2.9e-16 90.5 80 58.8
Cfa024968 Carpinus fangiana HOM05D006210 ORTHO05D007510 5.4e-15 86.3 234 32.1
SEGI_25119 Sequoiadendron giganteum HOM05D006210 ORTHO05D007510 7.3e-12 75.9 53 60.4
Zm00001eb416010 Zea mays HOM05D017284 ORTHO05D007510 7.3e-12 75.9 70 51.4
Aqoxy6G02518 Aquilegia oxysepala HOM05D006210 ORTHO05D007510 6.2e-11 72.8 55 74.5
SMO196G0213 Selaginella moellendorffii HOM05D006210 ORTHO05D007510 1.7e-08 64.7 96 37.5
SMO234G0002 Selaginella moellendorffii HOM05D006210 ORTHO05D007510 3.7e-08 63.5 140 31.4
Haze_26906 Corylus avellana HOM05D002462 ORTHO05D002893 2.4e-07 60.8 117 37.6
Lalb_Chr01g0020941 Lupinus albus HOM05D006451 ORTHO05D007680 2.4e-07 60.8 174 29.9
Psat6g104120 Pisum sativum HOM05D006451 ORTHO05D007680 7.0e-07 59.3 185 28.1
Phvul.007G277400 Phaseolus vulgaris HOM05D006451 ORTHO05D007680 1.2e-06 58.5 211 27.0
AUR62015660 Chenopodium quinoa HOM05D001340 ORTHO05D005342 2.1e-06 57.8 115 34.8
Medtr1g041435 Medicago truncatula HOM05D006451 ORTHO05D007680 3.5e-06 57.0 182 29.7
Medtr2g078020 Medicago truncatula HOM05D000868 ORTHO05D000711 4.6e-06 56.6 119 37.8
Lj6g0024617 Lotus japonicus HOM05D006451 ORTHO05D007680 6.0e-06 56.2 166 30.1
TPR.G25159 Trifolium pratense HOM05D006451 ORTHO05D007680 7.8e-06 55.8 182 28.0
VMungo0720G2899 Vigna mungo HOM05D006451 ORTHO05D007680 7.8e-06 55.8 173 28.3


User provided reference genes

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