Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G00068 Aquilegia oxysepala HOM05D006020 ORTHO05D007665 1.8e-298 1028.5 521 100.0
TAR365G0939 Trochodendron aralioides HOM05D006020 ORTHO05D007665 1.3e-155 553.9 522 57.1
Nn1g07811 Nelumbo nucifera HOM05D006020 ORTHO05D007665 1.1e-141 507.7 523 55.3
MBI10_g05712_MAGBIO Magnolia biondii HOM05D006020 ORTHO05D007665 2.6e-140 503.1 492 56.9
Dinv04657 Davidia involucrata HOM05D006020 ORTHO05D007665 1.1e-130 471.1 521 52.0
PSO674G0123 Papaver somniferum HOM05D006020 ORTHO05D007665 8.8e-128 461.5 522 51.3
Dinv19209 Davidia involucrata HOM05D006020 ORTHO05D007665 1.2e-127 461.1 525 51.6
GSVIVG01028621001 Vitis vinifera HOM05D006020 ORTHO05D007665 2.4e-125 453.4 520 51.5
TAR362G0890 Trochodendron aralioides HOM05D006020 ORTHO05D007665 5.4e-125 452.2 352 66.5
ATR0736G004 Amborella trichopoda HOM05D006020 ORTHO05D007665 4.2e-122 442.6 486 51.2
Potri.002G241200 Populus trichocarpa HOM05D006020 ORTHO05D007665 3.6e-121 439.5 503 49.1
Prupe.8G204200 Prunus persica HOM05D006020 ORTHO05D007665 4.4e-119 432.6 526 48.1
Rhsim13G0044300 Rhododendron simsii HOM05D006020 ORTHO05D006855 3.7e-118 429.5 535 47.7
Atru.chr5.2019 Acer truncatum HOM05D006020 ORTHO05D007665 4.9e-118 429.1 525 48.4
Ciclev10019729m.g Citrus clementina HOM05D006020 ORTHO05D007665 1.4e-117 427.6 533 47.1
Lj1C84T12 Lonicera japonica HOM05D006020 ORTHO05D007665 5.4e-117 425.6 446 51.1
Oeu042519.1 Olea europaea HOM05D006020 ORTHO05D007665 7.0e-117 425.2 530 46.4
Migut.N02265 Erythranthe guttata HOM05D006020 ORTHO05D007665 3.5e-116 422.9 518 45.9
Sabra02G0183800 Salix brachista HOM05D006020 ORTHO05D007665 7.8e-116 421.8 482 50.0
Manes.12G041000 Manihot esculenta HOM05D006020 ORTHO05D007665 1.7e-115 420.6 520 47.1
MD05G1177200 Malus domestica HOM05D006020 ORTHO05D007665 5.0e-115 419.1 512 47.9
FvH4_2g19230 Fragaria vesca HOM05D006020 ORTHO05D007665 6.6e-115 418.7 441 52.2
FAN24G1617 Fragaria x ananassa HOM05D006020 ORTHO05D007665 3.3e-114 416.4 441 51.9
Manes.13G045000 Manihot esculenta HOM05D006020 ORTHO05D007665 3.3e-114 416.4 535 46.7
RcHm_v2.0_Chr6g0285011 Rosa chinensis HOM05D006020 ORTHO05D007665 3.3e-114 416.4 497 49.9
MSTRG.17550 Avicennia marina HOM05D006020 ORTHO05D007665 9.5e-114 414.8 439 50.1
Actinidia37585 Actinidia chinensis HOM05D006020 ORTHO05D007665 1.0e-112 411.4 523 47.8
CiPaw.04G106000 Carya illinoinensis HOM05D006020 ORTHO05D007665 6.8e-112 408.7 522 45.8
Sc05g0002440 Simmondsia chinensis HOM05D006020 ORTHO05D007665 1.2e-111 407.9 514 44.9
FAN27G2268 Fragaria x ananassa HOM05D006020 ORTHO05D007665 2.0e-111 407.1 442 51.8
Nitab4.5_0002085g0020 Nicotiana tabacum HOM05D006020 ORTHO05D007665 2.0e-111 407.1 438 51.8
Thecc.01G227300 Theobroma cacao HOM05D006020 ORTHO05D007665 2.6e-111 406.8 453 50.6
AT5G48830 Arabidopsis thaliana HOM05D006020 ORTHO05D007665 3.4e-111 406.4 511 45.8
TWI75G0236 Tripterygium wilfordii HOM05D006020 ORTHO05D007665 2.2e-110 403.7 498 47.4
Duzib133G0822 Durio zibethinus HOM05D006020 ORTHO05D007665 4.9e-110 402.5 525 45.3
Nitab4.5_0001872g0010 Nicotiana tabacum HOM05D006020 ORTHO05D007665 1.1e-109 401.4 498 46.8
PSO170G4604 Papaver somniferum HOM05D006020 ORTHO05D007665 1.4e-109 401.0 457 50.3
ECA236G4144 Erigeron canadensis HOM05D006020 ORTHO05D007665 3.2e-109 399.8 451 51.2
Nitab4.5_0000045g0010 Nicotiana tabacum HOM05D006020 ORTHO05D007665 7.0e-109 398.7 502 46.4
THA.LOC104818953 Tarenaya hassleriana HOM05D006020 ORTHO05D007665 7.0e-109 398.7 531 44.3
Nitab4.5_0004922g0030 Nicotiana tabacum HOM05D006020 ORTHO05D007665 9.2e-109 398.3 438 51.4
PGR044G0586 Punica granatum HOM05D006020 ORTHO05D007665 2.7e-108 396.7 443 51.5
Thhalv10004024m.g Eutrema salsugineum HOM05D006020 ORTHO05D007665 4.6e-108 396.0 458 48.5
CANSAT01G2399 Cannabis sativa HOM05D006020 ORTHO05D007665 1.7e-107 394.0 533 45.6
Gorai.007G153400 Gossypium raimondii HOM05D006020 ORTHO05D007665 3.0e-107 393.3 522 44.6
Glyma.18G171900 Glycine max HOM05D006020 ORTHO05D007665 1.1e-106 391.3 494 46.4
Gohir.D11G143100 Gossypium hirsutum HOM05D006020 ORTHO05D007665 3.3e-106 389.8 531 44.1
C07p39450 Brassica napus HOM05D006020 ORTHO05D007665 5.6e-106 389.0 462 48.3
BolC7t44464H Brassica oleracea HOM05D006020 ORTHO05D007665 5.6e-106 389.0 462 48.3
BcaC06g30754 Brassica carinata HOM05D006020 ORTHO05D007665 7.3e-106 388.7 462 48.3
Gohir.A11G136800 Gossypium hirsutum HOM05D006020 ORTHO05D007665 2.8e-105 386.7 522 44.4
Medtr7g058760 Medicago truncatula HOM05D006020 ORTHO05D007665 2.8e-105 386.7 446 48.2
QL04p091507 Quercus lobata HOM05D006020 ORTHO05D007665 4.7e-105 386.0 576 41.8
TPR.G15290 Trifolium pratense HOM05D006020 ORTHO05D007665 4.7e-105 386.0 443 49.4
FAN15G0009 Fragaria x ananassa HOM05D006020 ORTHO05D007665 6.2e-105 385.6 495 46.5
Lj1g0020866 Lotus japonicus HOM05D006020 ORTHO05D007665 6.2e-105 385.6 442 49.1
Solyc09g061420.3 Solanum lycopersicum HOM05D006020 ORTHO05D007665 8.0e-105 385.2 450 50.0
Aa31sc866G30 Aethionema arabicum HOM05D006020 ORTHO05D007665 1.1e-104 384.8 457 46.8
Carub.0008s0856 Capsella rubella HOM05D006020 ORTHO05D007665 1.4e-104 384.4 519 43.4
Lalb_Chr19g0125561 Lupinus albus HOM05D006020 ORTHO05D007665 1.4e-104 384.4 483 46.2
Cc01_g17190 Coffea canephora HOM05D006020 ORTHO05D007665 1.8e-104 384.0 454 50.0
Eucgr.K03608 Eucalyptus grandis HOM05D006020 ORTHO05D007665 1.8e-104 384.0 494 48.2
CAN.G771.64 Capsicum annuum HOM05D006020 ORTHO05D007665 3.1e-104 383.3 435 49.4
A06p38870 Brassica napus HOM05D006020 ORTHO05D007665 5.2e-104 382.5 459 47.7
AL8G22000 Arabidopsis lyrata HOM05D006020 ORTHO05D007665 6.8e-104 382.1 463 47.1
BraA06t26802Z Brassica rapa HOM05D006020 ORTHO05D007665 2.0e-103 380.6 469 46.7
CARHR182910 Cardamine hirsuta HOM05D006020 ORTHO05D007665 9.8e-103 378.3 510 43.7
BcaB07g30043 Brassica carinata HOM05D006020 ORTHO05D007665 1.3e-102 377.9 461 47.9
HanXRQChr10g0287321 Helianthus annuus HOM05D006020 ORTHO05D007665 2.9e-102 376.7 449 48.8
COL.COLO4_09005 Corchorus olitorius HOM05D006020 ORTHO05D007665 8.3e-102 375.2 577 41.8
Sp2g19230 Schrenkiella parvula HOM05D006020 ORTHO05D007665 1.1e-101 374.8 458 47.4
Sed0023867 Sechium edule HOM05D006020 ORTHO05D007665 1.9e-101 374.0 523 42.8
A02p37730 Brassica napus HOM05D006020 ORTHO05D007665 3.2e-101 373.2 524 44.7
Phvul.008G124000 Phaseolus vulgaris HOM05D006020 ORTHO05D007665 7.1e-101 372.1 447 47.4
BolC2t11751H Brassica oleracea HOM05D006020 ORTHO05D007665 1.2e-100 371.3 498 45.2
VMungo1383G1607 Vigna mungo HOM05D006020 ORTHO05D007665 1.2e-100 371.3 443 47.4
vmacro02750 Vaccinium macrocarpon HOM05D006020 ORTHO05D007665 3.5e-100 369.8 547 42.2
BcaC03g17676 Brassica carinata HOM05D006020 ORTHO05D007665 7.8e-100 368.6 497 45.1
C02p56820 Brassica napus HOM05D006020 ORTHO05D007665 7.8e-100 368.6 497 45.1
Hund05517 Selenicereus undatus HOM05D006020 ORTHO05D007665 7.8e-100 368.6 444 45.0
BraA02t08755Z Brassica rapa HOM05D006020 ORTHO05D007665 1.7e-99 367.5 462 47.4
HPP92_017884 Vanilla planifolia HOM05D006020 ORTHO05D007665 1.7e-99 367.5 522 41.0
CDE06G1596 Ceratophyllum demersum HOM05D006020 ORTHO05D007665 2.5e-98 363.6 375 51.7
arahy.Tifrunner.gnm1.ann1.PQ4NGV Arachis hypogaea HOM05D006020 ORTHO05D007665 3.6e-97 359.8 472 44.7
Lsat_1_v5_gn_8_90041 Lactuca sativa HOM05D006066 ORTHO05D007720 2.3e-96 357.1 451 47.2
MELO3C012759.2 Cucumis melo HOM05D006020 ORTHO05D007665 4.0e-96 356.3 522 41.8
SalBow2G1017 Salvia bowleyana HOM05D006020 ORTHO05D007665 5.2e-96 355.9 523 43.0
Haze_24783 Corylus avellana HOM05D006020 ORTHO05D007665 6.8e-96 355.5 381 51.2
Zm00001eb241910 Zea mays HOM05D006020 ORTHO05D007665 2.6e-95 353.6 461 46.0
AUR62031841 Chenopodium quinoa HOM05D006020 ORTHO05D007665 3.4e-95 353.2 532 38.9
EL10Ac7g17782 Beta vulgaris HOM05D006020 ORTHO05D007665 9.9e-95 351.7 522 39.1
CsaV3_7G025840 Cucumis sativus L. HOM05D006020 ORTHO05D007665 1.7e-94 350.9 435 46.2
Sopen09g024240 Solanum pennellii HOM05D006020 ORTHO05D007665 9.2e-93 345.1 538 41.8
MBI19_g27116_MAGBIO Magnolia biondii HOM05D006020 ORTHO05D007665 3.5e-92 343.2 303 61.4
AUR62008869 Chenopodium quinoa HOM05D006020 ORTHO05D007665 7.3e-90 335.5 496 39.3
ClCG09G009100 Citrullus lanatus HOM05D006020 ORTHO05D007665 3.3e-82 310.1 521 39.2
Glyma.08G355500 Glycine max HOM05D006020 ORTHO05D007665 2.1e-81 307.4 442 43.7
Ah.08g213940 Amaranthus hybridus HOM05D006020 ORTHO05D007665 5.3e-80 302.8 374 43.0
SEGI_37377 Sequoiadendron giganteum HOM05D006020 ORTHO05D007665 8.7e-75 285.4 443 40.4
Actinidia30087 Actinidia chinensis HOM05D006020 ORTHO05D007665 2.3e-67 260.8 206 65.5
MBI01_g07173_MAGBIO Magnolia biondii HOM05D006020 ORTHO05D007665 6.2e-65 252.7 282 52.5
DCAR_018556 Daucus carota HOM05D006066 ORTHO05D007720 1.2e-63 248.4 379 39.3
MBI09_g17752_MAGBIO Magnolia biondii HOM05D006020 ORTHO05D007665 5.7e-58 229.6 302 46.7
SGA_v2.0_scaffold42G16144 Striga asiatica HOM05D006020 ORTHO05D007665 1.3e-57 228.4 318 43.1
HPP92_017879 Vanilla planifolia HOM05D006020 ORTHO05D007665 1.2e-55 221.9 282 44.3
Peaxi162Scf00107g00133 Petunia axillaris HOM05D006020 ORTHO05D007665 1.5e-55 221.5 448 35.9
Mapoly0173s0025 Marchantia polymorpha HOM05D006020 ORTHO05D007665 6.5e-54 216.1 458 34.7
Pp3c24_4300 Physcomitrium patens HOM05D006020 ORTHO05D007665 4.2e-53 213.4 504 32.5
AagrBONN_evm.TU.Sc2ySwM_344.2296 Anthoceros agrestis HOM05D006020 ORTHO05D007665 6.7e-51 206.1 459 35.5
SMO115G0313 Selaginella moellendorffii HOM05D006020 ORTHO05D007665 2.5e-50 204.1 431 32.7
arahy.Tifrunner.gnm1.ann1.3CP2KK Arachis hypogaea HOM05D001055 ORTHO05D000867 1.0e-46 192.2 188 56.9
SEGI_14686 Sequoiadendron giganteum HOM05D006020 ORTHO05D007665 3.6e-44 183.7 229 48.0
Psat3g144000 Pisum sativum HOM05D006020 ORTHO05D007665 1.0e-35 155.6 141 57.4
MBI16_g14987_MAGBIO Magnolia biondii HOM05D006020 ORTHO05D007665 1.1e-32 145.6 124 61.3
MBI12_g18650_MAGBIO Magnolia biondii HOM05D006020 ORTHO05D007665 2.0e-31 141.4 135 57.0
FAN15G1634 Fragaria x ananassa HOM05D006020 ORTHO05D007665 5.0e-30 136.7 193 40.9
arahy.Tifrunner.gnm1.ann1.PG1H4F Arachis hypogaea HOM05D006020 ORTHO05D007665 8.5e-30 136.0 263 34.2
unitig_85.g27279 Utricularia gibba HOM05D006020 ORTHO05D007665 1.4e-27 128.6 137 49.6
Cpa.g.sc8.167 Carica papaya HOM05D006020 ORTHO05D007665 1.1e-26 125.6 119 54.6
Psat3g144040 Pisum sativum HOM05D006020 ORTHO05D007665 6.3e-25 119.8 222 36.0
MBI12_g40856_MAGBIO Magnolia biondii HOM05D006020 ORTHO05D007665 2.8e-17 94.4 122 42.6
CBR_g31943 Chara braunii HOM05D006020 ORTHO05D007665 9.1e-16 89.4 141 38.3
MBI16_g14988_MAGBIO Magnolia biondii HOM05D006020 ORTHO05D007665 1.6e-15 88.6 94 48.9
TAR362G0264 Trochodendron aralioides HOM05D006020 ORTHO05D007665 7.7e-15 86.3 93 49.5
Os02g0515000 Oryza sativa ssp. japonica HOM05D006020 ORTHO05D007665 1.6e-12 78.6 166 36.1
PRCOL_00001532 Prasinoderma coloniale HOM05D006020 ORTHO05D007665 1.6e-12 78.6 192 29.7
Cpa.g.sc8.168 Carica papaya HOM05D006020 ORTHO05D007665 5.4e-08 63.5 138 36.2
MCO16G349 Micromonas commoda HOM05D006020 ORTHO05D007665 1.6e-07 62.0 72 43.1


User provided reference genes

Program Settings