Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G00054 Aquilegia oxysepala HOM05D006061 ORTHO05D007450 0.0e+00 1265.4 626 100.0
TAR365G1230 Trochodendron aralioides HOM05D006061 ORTHO05D007450 7.2e-209 731.1 628 60.8
Nn1g03086 Nelumbo nucifera HOM05D006061 ORTHO05D007450 2.6e-182 642.9 624 55.1
MBI07_g08916_MAGBIO Magnolia biondii HOM05D006061 ORTHO05D007450 1.7e-181 640.2 628 55.7
PSO170G3920 Papaver somniferum HOM05D006061 ORTHO05D007450 5.9e-179 631.7 624 53.2
Prupe.8G209500 Prunus persica HOM05D006061 ORTHO05D007450 1.7e-170 603.6 629 52.6
Actinidia30104 Actinidia chinensis HOM05D006061 ORTHO05D007450 1.9e-169 600.1 621 53.6
Cfa002517 Carpinus fangiana HOM05D006061 ORTHO05D007450 5.2e-167 592.0 625 52.8
Thecc.01G244800 Theobroma cacao HOM05D006061 ORTHO05D007450 6.0e-163 578.6 625 51.2
Potri.014G194800 Populus trichocarpa HOM05D006061 ORTHO05D007450 4.0e-159 565.8 625 49.9
GSVIVG01028489001 Vitis vinifera HOM05D006061 ORTHO05D007450 6.8e-159 565.1 577 52.9
Duzib138G1183 Durio zibethinus HOM05D006061 ORTHO05D007450 1.2e-158 564.3 623 50.7
RcHm_v2.0_Chr6g0285561 Rosa chinensis HOM05D006061 ORTHO05D007450 4.1e-156 555.8 631 49.3
Atru.chr5.1926 Acer truncatum HOM05D006061 ORTHO05D007450 1.1e-153 547.7 625 49.0
Gorai.007G151600 Gossypium raimondii HOM05D006061 ORTHO05D007450 7.3e-153 545.0 623 50.1
Gohir.A11G135100 Gossypium hirsutum HOM05D006061 ORTHO05D007450 6.2e-152 542.0 626 50.2
ClCG09G009420 Citrullus lanatus HOM05D006061 ORTHO05D007450 1.2e-150 537.7 625 49.8
MD10G1171000 Malus domestica HOM05D006061 ORTHO05D007450 9.9e-150 534.6 629 48.5
Ciclev10019392m.g Citrus clementina HOM05D006061 ORTHO05D007450 1.1e-148 531.2 629 49.3
Gohir.D11G141300 Gossypium hirsutum HOM05D006061 ORTHO05D007450 4.1e-148 529.3 626 49.4
FvH4_2g19870 Fragaria vesca HOM05D006061 ORTHO05D007450 7.1e-148 528.5 631 47.4
PGSC0003DMG401020085 Solanum tuberosum HOM05D006061 ORTHO05D007450 7.1e-148 528.5 631 48.0
Solyc06g083640.4 Solanum lycopersicum HOM05D006061 ORTHO05D007450 1.2e-147 527.7 632 48.3
CsaV3_7G025440 Cucumis sativus L. HOM05D006061 ORTHO05D007450 2.7e-147 526.6 625 48.2
Sopen06g035030 Solanum pennellii HOM05D006061 ORTHO05D007450 6.0e-147 525.4 631 48.0
CiPaw.04G108700 Carya illinoinensis HOM05D006061 ORTHO05D007450 8.6e-146 521.5 527 54.8
Lj1g0026990 Lotus japonicus HOM05D006061 ORTHO05D007450 3.6e-144 516.2 624 47.9
Lj1A80G16 Lonicera japonica HOM05D006061 ORTHO05D007450 3.1e-143 513.1 642 47.2
Migut.N02246 Erythranthe guttata HOM05D006061 ORTHO05D007450 4.0e-143 512.7 626 47.9
Eucgr.H00824 Eucalyptus grandis HOM05D006061 ORTHO05D007450 1.2e-142 511.1 622 46.9
EL10Ac7g17761 Beta vulgaris HOM05D006061 ORTHO05D007450 3.4e-142 509.6 643 46.7
SalBow6G4925 Salvia bowleyana HOM05D006061 ORTHO05D007450 7.6e-142 508.4 628 47.0
Sc05g0002480 Simmondsia chinensis HOM05D006061 ORTHO05D007450 1.7e-141 507.3 625 46.2
MSTRG.12506 Avicennia marina HOM05D006061 ORTHO05D007450 3.8e-141 506.1 608 47.2
CAN.G771.51 Capsicum annuum HOM05D006061 ORTHO05D007450 4.9e-141 505.8 645 46.0
Nitab4.5_0002085g0150 Nicotiana tabacum HOM05D006061 ORTHO05D007450 4.9e-141 505.8 628 47.0
Sabra14G0142900 Salix brachista HOM05D006061 ORTHO05D007450 8.4e-141 505.0 580 49.7
Nitab4.5_0006211g0030 Nicotiana tabacum HOM05D006061 ORTHO05D007450 4.2e-140 502.7 627 47.0
Glyma.19G171100 Glycine max HOM05D006061 ORTHO05D007450 5.4e-140 502.3 621 46.9
AUR62008856 Chenopodium quinoa HOM05D006061 ORTHO05D007450 2.7e-139 500.0 626 45.5
TWI59G0704 Tripterygium wilfordii HOM05D006061 ORTHO05D007450 4.6e-139 499.2 625 47.4
Haze_24749 Corylus avellana HOM05D006061 ORTHO05D007450 1.7e-138 497.3 702 44.6
Glyma.03G169900 Glycine max HOM05D006061 ORTHO05D007450 1.7e-138 497.3 621 47.3
PGR083G1193 Punica granatum HOM05D006061 ORTHO05D007450 2.3e-138 496.9 627 46.4
Peaxi162Scf00517g00313 Petunia axillaris HOM05D006061 ORTHO05D007450 3.0e-138 496.5 642 45.0
CANSAT01G1389 Cannabis sativa HOM05D006061 ORTHO05D007450 5.6e-137 492.3 633 46.8
Ca_08767_v3 Cicer arietinum L. HOM05D006061 ORTHO05D007450 5.6e-137 492.3 627 45.3
Phvul.001G168300 Phaseolus vulgaris HOM05D006061 ORTHO05D007450 5.6e-137 492.3 623 46.5
arahy.Tifrunner.gnm1.ann1.J8EIPB Arachis hypogaea HOM05D006061 ORTHO05D007450 9.6e-137 491.5 626 45.7
THA.LOC104814544 Tarenaya hassleriana HOM05D006061 ORTHO05D007450 9.6e-137 491.5 627 46.3
arahy.Tifrunner.gnm1.ann1.4WTK5H Arachis hypogaea HOM05D006061 ORTHO05D007450 4.8e-136 489.2 626 45.5
Hund05498 Selenicereus undatus HOM05D006061 ORTHO05D007450 2.0e-134 483.8 630 44.1
SGA_v2.0_scaffold3G01591 Striga asiatica HOM05D006061 ORTHO05D007450 2.0e-134 483.8 643 45.3
Psat3g050240 Pisum sativum HOM05D006061 ORTHO05D007450 2.2e-133 480.3 628 46.7
Rhsim13G0041800 Rhododendron simsii HOM05D006061 ORTHO05D000758 3.8e-133 479.6 718 41.4
COL.COLO4_08163 Corchorus olitorius HOM05D006061 ORTHO05D007450 7.1e-132 475.3 670 44.3
C07p00980 Brassica napus HOM05D006061 ORTHO05D007450 1.6e-131 474.2 627 45.1
BcaC06g36697 Brassica carinata HOM05D006061 ORTHO05D007450 4.6e-131 472.6 627 45.1
BolC7t40535H Brassica oleracea HOM05D006061 ORTHO05D007450 4.6e-131 472.6 627 45.1
BcaB03g16813 Brassica carinata HOM05D006061 ORTHO05D007450 8.7e-130 468.4 630 44.6
ATR0787G120 Amborella trichopoda HOM05D006061 ORTHO05D007450 4.8e-128 462.6 654 44.8
A07p00530 Brassica napus HOM05D006061 ORTHO05D007450 8.1e-128 461.8 628 44.4
BraA07t27847Z Brassica rapa HOM05D006061 ORTHO05D007450 8.1e-128 461.8 628 44.4
TPR.G7560 Trifolium pratense HOM05D006061 ORTHO05D007450 1.5e-126 457.6 634 44.5
AL3G47870 Arabidopsis lyrata HOM05D006061 ORTHO05D007450 3.4e-126 456.4 629 44.0
Aa31LG8G17130 Aethionema arabicum HOM05D006061 ORTHO05D007450 1.3e-125 454.5 628 43.9
AT2G20210 Arabidopsis thaliana HOM05D006061 ORTHO05D007450 1.1e-124 451.4 631 43.9
Lsat_1_v5_gn_8_90281 Lactuca sativa HOM05D006061 ORTHO05D007450 4.2e-124 449.5 626 42.7
Ah.15g093400 Amaranthus hybridus HOM05D006061 ORTHO05D007450 5.5e-124 449.1 624 42.8
HanXRQChr13g0409031 Helianthus annuus HOM05D006061 ORTHO05D007450 9.3e-124 448.4 613 40.9
Medtr7g099450 Medicago truncatula HOM05D006061 ORTHO05D007450 3.0e-122 443.4 635 44.4
Manes.12G040800 Manihot esculenta HOM05D006061 ORTHO05D007450 5.1e-122 442.6 484 52.3
Thhalv10001935m.g Eutrema salsugineum HOM05D006061 ORTHO05D007450 7.4e-121 438.7 630 43.7
FAN27G0211 Fragaria x ananassa HOM05D006061 ORTHO05D007450 8.2e-120 435.3 639 41.9
vmacro02729 Vaccinium macrocarpon HOM05D006061 ORTHO05D007450 1.2e-110 404.8 395 54.4
ECA236G2978 Erigeron canadensis HOM05D006061 ORTHO05D000758 2.2e-109 400.6 616 38.6
Cc01_g08490 Coffea canephora HOM05D006061 ORTHO05D007450 7.9e-107 392.1 488 44.7
Sp3g33450 Schrenkiella parvula HOM05D006061 ORTHO05D007450 1.5e-102 377.9 485 48.0
Carub.0003s3454 Capsella rubella HOM05D006061 ORTHO05D007450 4.2e-100 369.8 485 47.6
FAN15G2648 Fragaria x ananassa HOM05D006061 ORTHO05D007450 6.5e-93 345.9 416 48.8
CSS0041718 Camellia sinensis var. sinensis HOM05D006061 ORTHO05D007450 2.3e-90 337.4 331 55.6
Lalb_Chr01g0019421 Lupinus albus HOM05D006061 ORTHO05D007450 1.7e-85 321.2 384 47.7
AUR62025388 Chenopodium quinoa HOM05D006061 ORTHO05D007450 1.2e-81 308.5 413 45.3
Sed0025129 Sechium edule HOM05D006061 ORTHO05D007450 1.7e-77 294.7 317 52.4
VMungo1383G3365 Vigna mungo HOM05D006061 ORTHO05D007450 2.9e-69 267.3 319 49.5
Cpa.g.sc8.208 Carica papaya HOM05D006061 ORTHO05D007450 2.6e-65 254.2 343 45.5
MELO3C024149.2 Cucumis melo HOM05D006061 ORTHO05D007450 2.6e-65 254.2 278 50.4
Cpa.g.sc8.207 Carica papaya HOM05D006061 ORTHO05D007450 3.4e-65 253.8 264 52.3
Pp3c7_21970 Physcomitrium patens HOM05D006061 ORTHO05D007450 4.3e-60 236.9 654 29.8
Oeu039640.1 Olea europaea HOM05D006061 ORTHO05D007450 9.5e-52 209.1 225 50.2
CARHR110700 Cardamine hirsuta HOM05D006061 ORTHO05D007450 2.0e-49 201.4 277 45.1
Zm00001eb133830 Zea mays HOM05D006061 ORTHO05D007450 3.7e-48 197.2 286 40.6
VMungo1383G3184 Vigna mungo HOM05D006061 ORTHO05D007450 5.4e-47 193.4 303 38.6
SMO356G0042 Selaginella moellendorffii HOM05D006061 ORTHO05D007450 1.3e-45 188.7 635 27.6
SEGI_05721 Sequoiadendron giganteum HOM05D006061 ORTHO05D007450 5.0e-45 186.8 322 38.2
unitig_8.g4624 Utricularia gibba HOM05D006061 ORTHO05D007450 1.5e-41 175.3 277 40.4
DCAR_004700 Daucus carota HOM05D000065 ORTHO05D007450 5.8e-41 173.3 289 39.8
Lalb_Chr01g0019411 Lupinus albus HOM05D006061 ORTHO05D007450 2.2e-40 171.4 225 46.7
HPP92_014830 Vanilla planifolia HOM05D006061 ORTHO05D007450 3.4e-33 147.5 265 36.2
Os12g0228900 Oryza sativa ssp. japonica HOM05D006061 ORTHO05D007450 1.4e-31 142.1 260 37.3
vmacro02728 Vaccinium macrocarpon HOM05D006061 ORTHO05D007450 7.1e-31 139.8 291 33.0
CBR_g31999 Chara braunii HOM05D006061 ORTHO05D007450 2.4e-26 124.8 563 24.7
Zm00001eb008990 Zea mays HOM05D006061 ORTHO05D007450 4.0e-26 124.0 150 49.3
Oeu039641.2 Olea europaea HOM05D006061 ORTHO05D007450 5.8e-25 120.2 161 41.6
Zm00001eb428270 Zea mays HOM05D006061 ORTHO05D007450 3.8e-24 117.5 159 46.5
PSO675G3076 Papaver somniferum HOM05D006061 ORTHO05D007450 1.2e-22 112.5 346 31.2
Cc00_g31740 Coffea canephora HOM05D006061 ORTHO05D007450 3.5e-22 110.9 151 43.7
Phvul.004G074200 Phaseolus vulgaris HOM05D006061 ORTHO05D007450 7.8e-22 109.8 183 42.6
Zm00001eb120120 Zea mays HOM05D006061 ORTHO05D007450 2.3e-21 108.2 127 51.2
SHI26842 Sapria himalayana HOM05D006061 ORTHO05D007450 7.3e-20 103.2 169 39.6
Gorai.008G101100 Gossypium raimondii HOM05D006061 ORTHO05D007450 9.0e-18 96.3 180 33.9
Gohir.D10G064900 Gossypium hirsutum HOM05D006061 ORTHO05D007450 9.9e-17 92.8 138 38.4
Rhsim13G0055400 Rhododendron simsii HOM05D006061 ORTHO05D007450 1.2e-14 85.9 123 39.8
Zm00001eb399320 Zea mays HOM05D000103 ORTHO05D007450 2.7e-14 84.7 112 46.4
CARHR174390 Cardamine hirsuta HOM05D006061 ORTHO05D007450 8.7e-13 79.7 101 39.6
Psat0ss8385g0040 Pisum sativum HOM05D006061 ORTHO05D007450 8.7e-13 79.7 128 35.2
Psat1g093320 Pisum sativum HOM05D006061 ORTHO05D007450 1.9e-12 78.6 133 33.1
Zm00001eb068850 Zea mays HOM05D006061 ORTHO05D007450 1.8e-10 72.0 98 46.9
SHI26843 Sapria himalayana HOM05D006061 ORTHO05D007450 1.5e-09 68.9 195 30.8
CDE09G0654 Ceratophyllum demersum HOM05D006061 ORTHO05D007450 2.9e-08 64.7 78 46.2
PSO541G3330 Papaver somniferum HOM05D006061 ORTHO05D007450 5.5e-07 60.5 464 25.0
SHI26848 Sapria himalayana HOM05D006061 ORTHO05D007450 6.0e-06 57.0 92 42.4


User provided reference genes

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