Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G00040 Aquilegia oxysepala HOM05D007255 ORTHO05D009052 2.6e-135 485.3 237 100.0
TAR365G1235 Trochodendron aralioides HOM05D007255 ORTHO05D009052 4.8e-97 358.2 238 76.1
Dinv10428 Davidia involucrata HOM05D007255 ORTHO05D009052 3.7e-89 332.0 238 70.2
Aqoxy2G00044 Aquilegia oxysepala HOM05D007255 ORTHO05D009052 4.8e-89 331.6 183 90.7
Potri.002G250500 Populus trichocarpa HOM05D007255 ORTHO05D009052 4.1e-88 328.6 216 74.1
Hma1.2p1_0161F.1_g071360 Hydrangea macrophylla HOM05D007255 ORTHO05D009052 2.5e-85 319.3 238 70.2
Thecc.01G211700 Theobroma cacao HOM05D007255 ORTHO05D009052 4.2e-85 318.5 236 69.1
Nn1g08274 Nelumbo nucifera HOM05D007255 ORTHO05D009052 2.1e-84 316.2 308 57.5
Sabra02G0190600 Salix brachista HOM05D007255 ORTHO05D009052 2.1e-84 316.2 233 69.1
QL09p046138 Quercus lobata HOM05D007255 ORTHO05D009052 6.1e-84 314.7 234 67.5
Rhsim01G0248900 Rhododendron simsii HOM05D007255 ORTHO05D009052 6.1e-84 314.7 246 67.5
Prupe.8G191100 Prunus persica HOM05D007255 ORTHO05D009052 7.9e-84 314.3 241 67.6
Actinidia34549 Actinidia chinensis HOM05D007255 ORTHO05D009052 3.0e-83 312.4 237 69.6
CiPaw.13G054800 Carya illinoinensis HOM05D007255 ORTHO05D009052 3.9e-83 312.0 233 70.0
Cpa.g.sc8.78 Carica papaya HOM05D007255 ORTHO05D009052 1.1e-82 310.5 233 68.2
RcHm_v2.0_Chr6g0282891 Rosa chinensis HOM05D007255 ORTHO05D009052 3.3e-82 308.9 241 66.8
FvH4_2g17870 Fragaria vesca HOM05D007255 ORTHO05D009052 1.7e-81 306.6 243 64.6
FAN24G0557 Fragaria x ananassa HOM05D007255 ORTHO05D009052 2.2e-81 306.2 243 64.6
Cc01_g16200 Coffea canephora HOM05D007255 ORTHO05D009052 2.8e-81 305.8 217 71.0
FAN15G3515 Fragaria x ananassa HOM05D007255 ORTHO05D009052 3.7e-81 305.4 238 66.8
FAN27G1291 Fragaria x ananassa HOM05D007255 ORTHO05D009052 3.7e-81 305.4 238 66.8
Duzib211G0668 Durio zibethinus HOM05D007255 ORTHO05D009052 4.8e-81 305.1 236 66.5
Eucgr.K02090 Eucalyptus grandis HOM05D007255 ORTHO05D009052 4.8e-81 305.1 199 74.4
Manes.13G054000 Manihot esculenta HOM05D007255 ORTHO05D009052 1.4e-80 303.5 228 67.1
COL.COLO4_28926 Corchorus olitorius HOM05D007255 ORTHO05D009052 1.8e-80 303.1 241 66.4
vmacro14695 Vaccinium macrocarpon HOM05D007255 ORTHO05D009052 4.1e-80 302.0 247 64.4
Atru.chr6.3551 Acer truncatum HOM05D007255 ORTHO05D009052 9.1e-80 300.8 220 67.3
MSTRG.18490 Avicennia marina HOM05D007255 ORTHO05D009052 2.6e-79 299.3 242 65.3
Nn1g03664 Nelumbo nucifera HOM05D007255 ORTHO05D009052 2.6e-79 299.3 236 66.5
PSO170G5614 Papaver somniferum HOM05D007255 ORTHO05D009052 4.5e-79 298.5 239 66.9
Solyc09g058990.3 Solanum lycopersicum HOM05D007255 ORTHO05D009052 4.5e-79 298.5 238 64.7
Ca_23187_v3 Cicer arietinum L. HOM05D007255 ORTHO05D009052 5.9e-79 298.1 238 65.1
Ca_30803_v3 Cicer arietinum L. HOM05D007255 ORTHO05D009052 5.9e-79 298.1 238 65.1
Nitab4.5_0000038g0080 Nicotiana tabacum HOM05D007255 ORTHO05D009052 5.9e-79 298.1 242 64.9
Nitab4.5_0005972g0030 Nicotiana tabacum HOM05D007255 ORTHO05D009052 2.9e-78 295.8 242 64.0
arahy.Tifrunner.gnm1.ann1.TV22BE Arachis hypogaea HOM05D007255 ORTHO05D009052 6.5e-78 294.7 251 62.5
SalBow6G0858 Salvia bowleyana HOM05D007255 ORTHO05D009052 6.5e-78 294.7 245 63.3
Oeu064665.2 Olea europaea HOM05D007255 ORTHO05D009052 3.2e-77 292.4 231 64.9
SGA_v2.0_scaffold29G12102 Striga asiatica HOM05D007255 ORTHO05D009052 3.2e-77 292.4 219 65.3
TWI18G1029 Tripterygium wilfordii HOM05D007255 ORTHO05D009052 3.2e-77 292.4 237 65.4
MD10G1152600 Malus domestica HOM05D007255 ORTHO05D009052 7.2e-77 291.2 262 61.5
TPR.G15196 Trifolium pratense HOM05D007255 ORTHO05D009052 7.2e-77 291.2 241 64.7
Glyma.03G089600 Glycine max HOM05D007255 ORTHO05D009052 9.4e-77 290.8 239 64.0
Sopen09g020080 Solanum pennellii HOM05D007255 ORTHO05D009052 9.4e-77 290.8 238 63.4
PGR044G0433 Punica granatum HOM05D007255 ORTHO05D009052 1.2e-76 290.4 211 68.7
Gorai.007G159200 Gossypium raimondii HOM05D007255 ORTHO05D009052 3.6e-76 288.9 236 63.1
PSO357G0536 Papaver somniferum HOM05D007255 ORTHO05D009052 4.7e-76 288.5 239 64.9
CANSAT01G0773 Cannabis sativa HOM05D007255 ORTHO05D009052 6.1e-76 288.1 238 62.2
Ciclev10016497m.g Citrus clementina HOM05D007255 ORTHO05D009052 6.1e-76 288.1 221 67.0
AL3G18750 Arabidopsis lyrata HOM05D007255 ORTHO05D009052 8.0e-76 287.7 231 64.1
ECA248G0740 Erigeron canadensis HOM05D007255 ORTHO05D009052 8.0e-76 287.7 231 64.5
Carub.0003s0699 Capsella rubella HOM05D007255 ORTHO05D009052 1.0e-75 287.3 231 64.1
Lsat_1_v5_gn_5_178401 Lactuca sativa HOM05D007255 ORTHO05D009052 1.4e-75 287.0 189 72.0
Gohir.A11G142200 Gossypium hirsutum HOM05D007255 ORTHO05D009052 1.8e-75 286.6 236 62.7
Medtr8g011480 Medicago truncatula HOM05D007255 ORTHO05D009052 1.8e-75 286.6 239 63.6
Gohir.D11G148500 Gossypium hirsutum HOM05D007255 ORTHO05D009052 3.0e-75 285.8 236 62.7
Phvul.010G031200 Phaseolus vulgaris HOM05D007255 ORTHO05D009052 3.9e-75 285.4 239 64.0
CARHR082090 Cardamine hirsuta HOM05D007255 ORTHO05D009052 5.2e-75 285.0 232 63.4
Hund02793 Selenicereus undatus HOM05D007255 ORTHO05D009052 5.2e-75 285.0 230 63.9
AT3G07440 Arabidopsis thaliana HOM05D007255 ORTHO05D009052 6.7e-75 284.6 231 63.6
Lalb_Chr12g0210041 Lupinus albus HOM05D007255 ORTHO05D009052 1.5e-74 283.5 205 67.3
THA.LOC104818995 Tarenaya hassleriana HOM05D007255 ORTHO05D009052 7.4e-74 281.2 215 66.0
Aa31LG5G18020 Aethionema arabicum HOM05D007255 ORTHO05D009052 2.2e-73 279.6 216 66.2
Sc05g0001760 Simmondsia chinensis HOM05D007255 ORTHO05D009052 2.2e-73 279.6 210 65.7
Sp2g18890 Schrenkiella parvula HOM05D007255 ORTHO05D009052 3.7e-73 278.9 234 62.4
Thhalv10004862m.g Eutrema salsugineum HOM05D007255 ORTHO05D009052 4.8e-73 278.5 233 63.9
Migut.D00726 Erythranthe guttata HOM05D007255 ORTHO05D009052 8.2e-73 277.7 245 61.2
Ah.11g051090 Amaranthus hybridus HOM05D007255 ORTHO05D009052 1.4e-72 276.9 232 61.2
A06p39120 Brassica napus HOM05D007255 ORTHO05D009052 1.4e-72 276.9 234 61.1
C07p39220 Brassica napus HOM05D007255 ORTHO05D009052 4.1e-72 275.4 234 60.3
BolC7t44442H Brassica oleracea HOM05D007255 ORTHO05D009052 4.1e-72 275.4 234 60.3
arahy.Tifrunner.gnm1.ann1.UDT0KZ Arachis hypogaea HOM05D007255 ORTHO05D009052 5.3e-72 275.0 207 69.1
BraA06t26826Z Brassica rapa HOM05D007255 ORTHO05D009052 1.2e-71 273.9 234 60.7
Lj3g0001968 Lotus japonicus HOM05D007255 ORTHO05D009052 1.2e-71 273.9 251 60.6
EL10Ac5g10635 Beta vulgaris HOM05D007255 ORTHO05D009052 2.9e-70 269.2 233 62.7
Zm00001eb241080 Zea mays HOM05D007255 ORTHO05D009052 1.5e-69 266.9 212 65.1
Os02g0478500 Oryza sativa ssp. japonica HOM05D007255 ORTHO05D009052 4.2e-69 265.4 212 64.2
BcaC06g30785 Brassica carinata HOM05D007255 ORTHO05D009052 2.1e-68 263.1 213 64.8
MELO3C012737.2 Cucumis melo HOM05D007255 ORTHO05D009052 3.6e-68 262.3 230 61.7
Sed0001908 Sechium edule HOM05D007255 ORTHO05D009052 1.4e-67 260.4 228 58.8
ATR0491G001 Amborella trichopoda HOM05D007255 ORTHO05D009052 2.3e-67 259.6 152 80.9
AUR62028710 Chenopodium quinoa HOM05D007255 ORTHO05D009052 1.2e-66 257.3 251 56.2
CsaV3_7G026920 Cucumis sativus L. HOM05D007255 ORTHO05D009052 2.8e-65 252.7 210 64.8
ClCG09G008130 Citrullus lanatus HOM05D007352 ORTHO05D009052 8.3e-65 251.1 276 52.9
AT5G48530 Arabidopsis thaliana HOM05D007255 ORTHO05D009052 1.4e-64 250.4 199 66.3
unitig_62.g23864 Utricularia gibba HOM05D007255 ORTHO05D009052 1.8e-64 250.0 244 57.8
GSVIVG01006076001 Vitis vinifera HOM05D007255 ORTHO05D009052 2.5e-61 239.6 139 84.2
unitig_64.g29772 Utricularia gibba HOM05D007255 ORTHO05D009052 3.2e-61 239.2 250 52.8
Haze_03304 Corylus avellana HOM05D007255 ORTHO05D009052 1.2e-60 237.3 170 71.2
HanXRQChr01g0025051 Helianthus annuus HOM05D007255 ORTHO05D009052 4.7e-60 235.3 211 61.6
Peaxi162Scf00335g01514 Petunia axillaris HOM05D007255 ORTHO05D009052 2.0e-58 229.9 236 54.7
CSS0043687 Camellia sinensis var. sinensis HOM05D007255 ORTHO05D009052 9.8e-58 227.6 159 74.2
DCAR_018628 Daucus carota HOM05D007255 ORTHO05D009052 4.8e-57 225.3 159 73.0
Lj1A100G17 Lonicera japonica HOM05D007255 ORTHO05D009052 2.4e-56 223.0 181 65.7
Actinidia23788 Actinidia chinensis HOM05D007255 ORTHO05D009052 3.8e-54 215.7 190 60.5
HPP92_024260 Vanilla planifolia HOM05D007255 ORTHO05D009052 5.2e-43 178.7 132 65.2
Glyma.16G083400 Glycine max HOM05D007255 ORTHO05D009052 7.5e-42 174.9 110 76.4
AUR62008128 Chenopodium quinoa HOM05D007255 ORTHO05D009052 3.3e-37 159.5 128 61.7
VMungo0331G1225 Vigna mungo HOM05D007255 ORTHO05D009052 8.3e-33 144.8 123 62.6
HPP92_024228 Vanilla planifolia HOM05D007255 ORTHO05D009052 4.9e-25 119.0 114 56.1
CDE04G1852 Ceratophyllum demersum HOM05D007255 ORTHO05D009052 1.9e-24 117.1 86 68.6
VMungo0331G0526 Vigna mungo HOM05D007255 ORTHO05D009052 7.3e-21 105.1 104 57.7
SEGI_09952 Sequoiadendron giganteum HOM05D007255 ORTHO05D009052 6.8e-19 98.6 76 68.4
Prupe.8G191300 Prunus persica HOM05D007255 ORTHO05D009052 1.4e-16 90.9 94 52.1
VMungo0251G0654 Vigna mungo HOM05D007255 ORTHO05D009052 1.9e-13 80.5 59 67.8
GSVIVG01006250001 Vitis vinifera HOM05D007255 ORTHO05D009052 7.3e-13 78.6 77 50.6
Potri.007G083100 Populus trichocarpa HOM05D007255 ORTHO05D009052 1.2e-07 61.2 36 75.0
Psat0s4060g0280 Pisum sativum HOM05D007255 ORTHO05D009052 7.9e-07 58.5 75 50.7


User provided reference genes

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