Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G00038 Aquilegia oxysepala HOM05D006222 ORTHO05D007677 5.6e-156 554.3 293 100.0
TAR362G1090 Trochodendron aralioides HOM05D006222 ORTHO05D007677 1.8e-90 336.7 249 73.1
PSO357G0657 Papaver somniferum HOM05D006222 ORTHO05D007677 2.8e-86 322.8 255 66.3
PSO170G0570 Papaver somniferum HOM05D006222 ORTHO05D007677 8.9e-85 317.8 255 65.9
Ciclev10021532m.g Citrus clementina HOM05D006222 ORTHO05D007677 3.7e-83 312.4 260 63.8
CDE05G0624 Ceratophyllum demersum HOM05D006222 ORTHO05D007677 1.2e-81 307.4 244 65.2
Rhsim09G0036800 Rhododendron simsii HOM05D006222 ORTHO05D007677 3.9e-80 302.4 274 60.2
CDE05G2371 Ceratophyllum demersum HOM05D006222 ORTHO05D007677 3.3e-79 299.3 238 66.4
Nn3g20171 Nelumbo nucifera HOM05D006222 ORTHO05D007677 3.6e-78 295.8 251 66.1
Prupe.1G180600 Prunus persica HOM05D006222 ORTHO05D007677 3.6e-78 295.8 278 56.8
Cfa008558 Carpinus fangiana HOM05D006222 ORTHO05D007677 1.4e-77 293.9 252 61.1
GSVIVG01031673001 Vitis vinifera HOM05D006222 ORTHO05D007677 1.4e-77 293.9 213 67.6
CiPaw.02G058300 Carya illinoinensis HOM05D006222 ORTHO05D007677 1.2e-76 290.8 259 61.4
Manes.11G113101 Manihot esculenta HOM05D006222 ORTHO05D007677 1.2e-76 290.8 202 69.3
TWI63G0082 Tripterygium wilfordii HOM05D006222 ORTHO05D007677 1.5e-76 290.4 253 60.9
AT2G43110 Arabidopsis thaliana HOM05D006222 ORTHO05D007677 3.4e-76 289.3 232 62.9
DCAR_027540 Daucus carota HOM05D006222 ORTHO05D007677 3.4e-76 289.3 252 60.3
AL4G41770 Arabidopsis lyrata HOM05D006222 ORTHO05D007677 7.5e-76 288.1 228 63.6
BcaC02g12413 Brassica carinata HOM05D006222 ORTHO05D007677 7.5e-76 288.1 246 59.3
A05p03600 Brassica napus HOM05D006222 ORTHO05D007677 1.7e-75 287.0 201 68.2
THA.LOC104804896 Tarenaya hassleriana HOM05D006222 ORTHO05D007677 1.7e-75 287.0 202 66.8
Oeu034479.1 Olea europaea HOM05D006222 ORTHO05D007677 2.2e-75 286.6 213 67.1
AL401U10010 Arabidopsis lyrata HOM05D006222 ORTHO05D007677 2.9e-75 286.2 228 63.2
Duzib268G0300 Durio zibethinus HOM05D006222 ORTHO05D007677 2.9e-75 286.2 201 67.2
Sabra14G0113700 Salix brachista HOM05D006222 ORTHO05D007677 3.7e-75 285.8 310 52.6
CSS0002349 Camellia sinensis var. sinensis HOM05D006222 ORTHO05D007677 4.9e-75 285.4 213 68.1
Thhalv10017033m.g Eutrema salsugineum HOM05D006222 ORTHO05D007677 4.9e-75 285.4 201 67.7
MD04G1034000 Malus domestica HOM05D006222 ORTHO05D007677 4.9e-75 285.4 227 63.4
CSS0005997 Camellia sinensis var. sinensis HOM05D006222 ORTHO05D007677 6.4e-75 285.0 213 67.6
Sp4g25240 Schrenkiella parvula HOM05D006222 ORTHO05D007677 8.3e-75 284.6 245 59.2
C04p04200 Brassica napus HOM05D006222 ORTHO05D007677 1.1e-74 284.3 201 67.7
BolC4t22057H Brassica oleracea HOM05D006222 ORTHO05D007677 1.1e-74 284.3 201 67.7
Gohir.A10G136100 Gossypium hirsutum HOM05D006222 ORTHO05D007677 1.1e-74 284.3 201 67.2
COL.COLO4_07298 Corchorus olitorius HOM05D006222 ORTHO05D007677 1.4e-74 283.9 269 56.1
Gorai.011G144300 Gossypium raimondii HOM05D006222 ORTHO05D007677 1.9e-74 283.5 201 67.2
Eucgr.A00219 Eucalyptus grandis HOM05D006222 ORTHO05D007677 2.4e-74 283.1 232 61.6
CANSAT78G1479 Cannabis sativa HOM05D006222 ORTHO05D007677 3.2e-74 282.7 213 67.6
Carub.0004s2559 Capsella rubella HOM05D006222 ORTHO05D007677 5.4e-74 282.0 251 57.8
Atru.chr3.1674 Acer truncatum HOM05D006222 ORTHO05D007677 1.2e-73 280.8 225 63.1
Aa31LG1G24920 Aethionema arabicum HOM05D006222 ORTHO05D007677 1.6e-73 280.4 269 55.8
EL10Ac5g11641 Beta vulgaris HOM05D006222 ORTHO05D007677 1.6e-73 280.4 275 56.7
BraA05t19346Z Brassica rapa HOM05D006222 ORTHO05D007677 1.6e-73 280.4 225 63.1
Gohir.D10G130500 Gossypium hirsutum HOM05D006222 ORTHO05D007677 1.6e-73 280.4 201 66.7
Hund13303 Selenicereus undatus HOM05D006222 ORTHO05D007677 3.5e-73 279.3 262 55.3
CARHR138180 Cardamine hirsuta HOM05D006222 ORTHO05D007677 1.3e-72 277.3 255 56.5
Thecc.04G181000 Theobroma cacao HOM05D006222 ORTHO05D007677 1.3e-72 277.3 279 54.8
RcHm_v2.0_Chr4g0409281 Rosa chinensis HOM05D006222 ORTHO05D007677 6.6e-72 275.0 201 67.2
ATR1089G038 Amborella trichopoda HOM05D006222 ORTHO05D007677 8.6e-72 274.6 221 64.3
Cc03_g10460 Coffea canephora HOM05D006222 ORTHO05D007677 8.6e-72 274.6 202 68.8
FvH4_4g11840 Fragaria vesca HOM05D006222 ORTHO05D007677 1.1e-71 274.2 247 58.7
BcaNung03540 Brassica carinata HOM05D006222 ORTHO05D007677 1.5e-71 273.9 201 67.7
Sc07g0007090 Simmondsia chinensis HOM05D006222 ORTHO05D007677 1.9e-71 273.5 262 56.5
Duzib212G0460 Durio zibethinus HOM05D006222 ORTHO05D007677 3.3e-71 272.7 201 66.7
Lalb_Chr06g0164621 Lupinus albus HOM05D006222 ORTHO05D007677 3.3e-71 272.7 249 56.6
PGSC0003DMG400013073 Solanum tuberosum HOM05D006222 ORTHO05D007677 1.2e-70 270.8 227 63.4
FAN12G2296 Fragaria x ananassa HOM05D006222 ORTHO05D007677 1.6e-70 270.4 247 58.3
FAN17G0755 Fragaria x ananassa HOM05D006222 ORTHO05D007677 3.6e-70 269.2 241 59.3
Hma1.2p1_1477F.1_g285900 Hydrangea macrophylla HOM05D006222 ORTHO05D007677 3.6e-70 269.2 188 70.7
Lj3P863T15 Lonicera japonica HOM05D006222 ORTHO05D007677 4.7e-70 268.9 247 58.3
PGR083G0744 Punica granatum HOM05D006222 ORTHO05D007677 6.2e-70 268.5 271 53.1
ClCG07G016700 Citrullus lanatus HOM05D006222 ORTHO05D007677 8.1e-70 268.1 214 61.7
SalBow3G0382 Salvia bowleyana HOM05D006222 ORTHO05D007677 1.1e-69 267.7 233 61.4
Sed0019288 Sechium edule HOM05D006222 ORTHO05D007677 1.1e-69 267.7 235 59.1
CsaV3_4G003830 Cucumis sativus L. HOM05D006222 ORTHO05D007677 4.0e-69 265.8 251 55.4
Sopen05g032350 Solanum pennellii HOM05D006222 ORTHO05D007677 5.2e-69 265.4 227 62.1
FAN12G2611 Fragaria x ananassa HOM05D006222 ORTHO05D007677 8.9e-69 264.6 261 55.6
HanXRQChr14g0432081 Helianthus annuus HOM05D006222 ORTHO05D007677 8.9e-69 264.6 209 61.7
SGA_v2.0_scaffold31G12583 Striga asiatica HOM05D006222 ORTHO05D007677 2.0e-68 263.5 233 59.2
ECA232G0640 Erigeron canadensis HOM05D006222 ORTHO05D007677 6.4e-67 258.5 199 61.8
MSTRG.24605 Avicennia marina HOM05D006222 ORTHO05D007677 8.3e-67 258.1 250 55.2
Ca_11418_v3 Cicer arietinum L. HOM05D006222 ORTHO05D007677 8.3e-67 258.1 205 61.0
arahy.Tifrunner.gnm1.ann1.VRQF1E Arachis hypogaea HOM05D006222 ORTHO05D007677 4.1e-66 255.8 205 61.5
TPR.G8895 Trifolium pratense HOM05D006222 ORTHO05D007677 7.1e-66 255.0 215 58.1
arahy.Tifrunner.gnm1.ann1.S0FJR3 Arachis hypogaea HOM05D006222 ORTHO05D007677 2.1e-65 253.4 207 60.4
Actinidia32943 Actinidia chinensis HOM05D006222 ORTHO05D007677 3.5e-65 252.7 182 70.9
Ah.12g062130 Amaranthus hybridus HOM05D006222 ORTHO05D007677 1.0e-64 251.1 248 54.4
Psat0s4086g0080 Pisum sativum HOM05D006222 ORTHO05D007677 1.3e-64 250.8 206 57.3
Medtr1g116820 Medicago truncatula HOM05D006222 ORTHO05D007677 2.3e-64 250.0 206 57.8
Dinv22662 Davidia involucrata HOM05D006222 ORTHO05D007677 6.6e-64 248.4 234 60.7
Glyma.20G248400 Glycine max HOM05D006222 ORTHO05D007677 6.6e-64 248.4 201 61.7
MELO3C017672.2 Cucumis melo HOM05D006222 ORTHO05D007677 7.3e-63 245.0 250 52.4
Migut.N00436 Erythranthe guttata HOM05D006222 ORTHO05D007677 1.4e-61 240.7 245 55.1
PGSC0003DMG400023306 Solanum tuberosum HOM05D006222 ORTHO05D007677 2.4e-61 240.0 170 71.2
Potri.014G150100 Populus trichocarpa HOM05D006222 ORTHO05D007677 8.9e-61 238.0 223 59.2
Peaxi162Scf00423g00727 Petunia axillaris HOM05D006222 ORTHO05D007677 2.6e-60 236.5 180 66.7
CAN.G1310.8 Capsicum annuum HOM05D006222 ORTHO05D007677 3.4e-60 236.1 177 67.2
vmacro22720 Vaccinium macrocarpon HOM05D006222 ORTHO05D007677 5.8e-60 235.3 250 56.4
FvH4_6g25320 Fragaria vesca HOM05D006222 ORTHO05D007677 7.6e-60 235.0 249 52.6
Os04g0348100 Oryza sativa ssp. japonica HOM05D006222 ORTHO05D007677 9.9e-60 234.6 216 54.2
Lj5g0022978 Lotus japonicus HOM05D006222 ORTHO05D007677 8.4e-59 231.5 202 57.9
VMungo0720G0284 Vigna mungo HOM05D006222 ORTHO05D007677 1.6e-57 227.3 188 59.0
Phvul.007G002100 Phaseolus vulgaris HOM05D006222 ORTHO05D007677 1.3e-56 224.2 224 51.8
Solyc05g053880.4 Solanum lycopersicum HOM05D006222 ORTHO05D007677 2.5e-55 219.9 198 61.6
Ah.12g060860 Amaranthus hybridus HOM05D006222 ORTHO05D007677 7.3e-55 218.4 282 45.7
Lsat_1_v5_gn_2_38021 Lactuca sativa HOM05D006222 ORTHO05D007677 3.6e-54 216.1 241 51.0
unitig_578.g15951 Utricularia gibba HOM05D006222 ORTHO05D007677 4.0e-53 212.6 225 52.0
SMO331G0016 Selaginella moellendorffii HOM05D006222 ORTHO05D007677 1.4e-50 204.1 197 52.3
Zm00001eb086320 Zea mays HOM05D006222 ORTHO05D007677 1.0e-48 198.0 180 56.1
AUR62029129 Chenopodium quinoa HOM05D006222 ORTHO05D007677 8.1e-46 188.3 226 47.3
Mapoly0037s0098 Marchantia polymorpha HOM05D006222 ORTHO05D007677 8.1e-46 188.3 243 42.0
Actinidia35881 Actinidia chinensis HOM05D006222 ORTHO05D007677 1.4e-45 187.6 163 60.1
Pp3c6_17250 Physcomitrium patens HOM05D006222 ORTHO05D007677 2.6e-44 183.3 200 45.5
RhsimUnG0147000 Rhododendron simsii HOM05D006222 ORTHO05D007677 1.3e-40 171.0 300 41.3
FAN05G2938 Fragaria x ananassa HOM05D006222 ORTHO05D007677 3.3e-39 166.4 136 64.0
CBR_g19109 Chara braunii HOM05D006222 ORTHO05D007677 4.3e-39 166.0 195 45.6
QL10p047309 Quercus lobata HOM05D006222 ORTHO05D007677 2.1e-38 163.7 174 52.9
QL10p043789 Quercus lobata HOM05D006222 ORTHO05D007677 6.2e-38 162.2 129 64.3
Nitab4.5_0000161g0130 Nicotiana tabacum HOM05D006222 ORTHO05D007677 8.1e-38 161.8 212 43.9
Rhsim04G0094000 Rhododendron simsii HOM05D006222 ORTHO05D007677 3.1e-37 159.8 327 37.9
Eucgr.L00544 Eucalyptus grandis HOM05D006222 ORTHO05D007677 2.5e-34 150.2 120 62.5
HPP92_024563 Vanilla planifolia HOM05D006222 ORTHO05D007677 2.5e-34 150.2 265 39.2
QL10p043792 Quercus lobata HOM05D006222 ORTHO05D007677 3.9e-32 142.9 83 78.3
QL10p047312 Quercus lobata HOM05D006222 ORTHO05D007677 8.7e-32 141.7 83 78.3
Haze_11067 Corylus avellana HOM05D006222 ORTHO05D007677 1.1e-31 141.4 101 65.3
AUR62014992 Chenopodium quinoa HOM05D006222 ORTHO05D007677 2.5e-31 140.2 165 44.2
Nitab4.5_0007578g0020 Nicotiana tabacum HOM05D006222 ORTHO05D007677 3.3e-31 139.8 212 40.6
CSS0048231 Camellia sinensis var. sinensis HOM05D006222 ORTHO05D007677 2.4e-29 133.7 100 66.0
MD13G1276400 Malus domestica HOM05D006222 ORTHO05D007677 5.3e-29 132.5 119 58.0
Haze_11066 Corylus avellana HOM05D006222 ORTHO05D007677 4.2e-26 122.9 145 51.0
Actinidia27187 Actinidia chinensis HOM05D006222 ORTHO05D007677 6.7e-24 115.5 186 45.7
Duzib268G0844 Durio zibethinus HOM05D006222 ORTHO05D007677 1.4e-21 107.8 94 54.3
Ah.12g060290 Amaranthus hybridus HOM05D006222 ORTHO05D007677 6.1e-17 92.4 72 56.9
A03p23980 Brassica napus HOM05D006222 ORTHO05D007677 7.2e-10 68.9 57 54.4
SEGI_30148 Sequoiadendron giganteum HOM05D006222 ORTHO05D007677 7.9e-09 65.5 51 62.7
AagrBONN_evm.TU.Sc2ySwM_362.227 Anthoceros agrestis HOM05D006222 ORTHO05D007677 5.7e-07 59.3 217 30.0


User provided reference genes

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