Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G00008 Aquilegia oxysepala HOM05D007784 ORTHO05D008654 5.2e-123 444.5 242 100.0
Aqoxy1G02344 Aquilegia oxysepala HOM05D007784 ORTHO05D008654 8.9e-123 443.7 242 99.6
QL08p022546 Quercus lobata HOM05D007784 ORTHO05D008654 1.8e-27 127.1 197 50.3
Duzib213G0720 Durio zibethinus HOM05D007784 ORTHO05D008654 4.7e-23 112.5 213 44.6
Potri.001G398000 Populus trichocarpa HOM05D007784 ORTHO05D008654 4.7e-23 112.5 208 42.8
Potri.011G116600 Populus trichocarpa HOM05D007784 ORTHO05D008654 8.0e-23 111.7 251 40.2
CiPaw.11G171500 Carya illinoinensis HOM05D007784 ORTHO05D008654 1.8e-22 110.5 204 46.6
PSO541G4378 Papaver somniferum HOM05D007784 ORTHO05D008654 1.8e-22 110.5 246 40.2
Duzib268G0159 Durio zibethinus HOM05D007784 ORTHO05D008654 6.8e-22 108.6 207 44.0
Thecc.07G095100 Theobroma cacao HOM05D007784 ORTHO05D008654 8.8e-22 108.2 207 44.9
Sabra11G0102100 Salix brachista HOM05D007784 ORTHO05D008654 2.0e-21 107.1 210 43.8
Cfa020564 Carpinus fangiana HOM05D007784 ORTHO05D008654 3.4e-21 106.3 205 45.9
Hma1.2p1_0387F.1_g141980 Hydrangea macrophylla HOM05D007784 ORTHO05D008654 3.4e-21 106.3 200 39.0
Cc05_g11830 Coffea canephora HOM05D007784 ORTHO05D008654 7.5e-21 105.1 208 42.8
Manes.15G088900 Manihot esculenta HOM05D007784 ORTHO05D008654 7.5e-21 105.1 213 46.5
COL.COLO4_36703 Corchorus olitorius HOM05D007784 ORTHO05D008654 1.7e-20 104.0 204 43.1
Gohir.A01G061700 Gossypium hirsutum HOM05D007784 ORTHO05D008654 3.7e-20 102.8 209 44.0
Sabra16G0260800 Salix brachista HOM05D007784 ORTHO05D008654 6.3e-20 102.1 206 41.3
TAR627G0175 Trochodendron aralioides HOM05D007784 ORTHO05D008654 8.3e-20 101.7 231 42.4
Ciclev10010505m.g Citrus clementina HOM05D007784 ORTHO05D008654 1.4e-19 100.9 210 42.4
CiPaw.12G119800 Carya illinoinensis HOM05D007784 ORTHO05D008654 1.8e-19 100.5 200 44.0
Gohir.D01G048300 Gossypium hirsutum HOM05D007784 ORTHO05D008654 1.8e-19 100.5 210 43.8
Gorai.002G068100 Gossypium raimondii HOM05D007784 ORTHO05D008654 1.8e-19 100.5 210 43.8
Nn1g04167 Nelumbo nucifera HOM05D007784 ORTHO05D008654 4.1e-19 99.4 267 37.1
TAR627G0444 Trochodendron aralioides HOM05D007784 ORTHO05D008654 5.4e-19 99.0 231 42.0
Nn1g06458 Nelumbo nucifera HOM05D007784 ORTHO05D008654 2.0e-18 97.1 226 35.4
Gohir.D13G151926 Gossypium hirsutum HOM05D007784 ORTHO05D008654 2.7e-18 96.7 213 43.7
Manes.03G106700 Manihot esculenta HOM05D007784 ORTHO05D008654 1.3e-17 94.4 213 42.3
Cpa.g.c36086 Carica papaya HOM05D007784 ORTHO05D008654 2.2e-17 93.6 221 38.5
FvH4_3g19630 Fragaria vesca HOM05D007784 ORTHO05D008654 2.9e-17 93.2 212 41.5
FAN11G2265 Fragaria x ananassa HOM05D007784 ORTHO05D008654 2.9e-17 93.2 212 41.5
Psat4g131560 Pisum sativum HOM05D007784 ORTHO05D008654 3.8e-17 92.8 192 34.4
PGR031G1623 Punica granatum HOM05D007784 ORTHO05D008654 5.0e-17 92.4 232 37.5
Oeu051079.1 Olea europaea HOM05D007784 ORTHO05D008654 6.5e-17 92.0 203 43.3
Prupe.4G177000 Prunus persica HOM05D007784 ORTHO05D008654 8.5e-17 91.7 217 43.8
CSS0002410 Camellia sinensis var. sinensis HOM05D007784 ORTHO05D008654 1.5e-16 90.9 208 42.8
MD03G1230800 Malus domestica HOM05D007784 ORTHO05D008654 1.9e-16 90.5 214 42.1
RcHm_v2.0_Chr5g0032821 Rosa chinensis HOM05D007784 ORTHO05D008654 1.9e-16 90.5 211 39.3
Actinidia09697 Actinidia chinensis HOM05D007784 ORTHO05D008654 5.5e-16 89.0 198 43.4
FAN21G3158 Fragaria x ananassa HOM05D007784 ORTHO05D008654 7.2e-16 88.6 215 40.0
ClCG11G017920 Citrullus lanatus HOM05D007784 ORTHO05D008654 9.4e-16 88.2 222 33.8
Lalb_Chr03g0030731 Lupinus albus HOM05D007784 ORTHO05D008654 9.4e-16 88.2 216 40.7
FAN16G2579 Fragaria x ananassa HOM05D007784 ORTHO05D008654 2.7e-15 86.7 209 40.7
FAN25G3654 Fragaria x ananassa HOM05D007784 ORTHO05D008654 8.0e-15 85.1 212 40.1
MSTRG.15239 Avicennia marina HOM05D007784 ORTHO05D008654 1.0e-14 84.7 198 43.4
VMungo1127G1039 Vigna mungo HOM05D007784 ORTHO05D008654 1.0e-14 84.7 208 38.0
Lalb_Chr01g0006591 Lupinus albus HOM05D007784 ORTHO05D008654 3.0e-14 83.2 223 37.7
Atru.chr2.2433 Acer truncatum HOM05D007784 ORTHO05D008654 4.4e-13 79.3 239 36.8
BcaB06g29548 Brassica carinata HOM05D009851 ORTHO05D008654 5.7e-13 79.0 208 42.3
Haze_09448 Corylus avellana HOM05D007784 ORTHO05D008654 7.5e-13 78.6 130 53.1
Phvul.011G165000 Phaseolus vulgaris HOM05D007784 ORTHO05D008654 1.3e-12 77.8 201 38.3
Solyc07g062960.1 Solanum lycopersicum HOM05D007784 ORTHO05D008654 1.3e-12 77.8 217 39.2
Sopen07g031150 Solanum pennellii HOM05D007784 ORTHO05D008654 1.3e-12 77.8 212 40.1
Sp3g13450 Schrenkiella parvula HOM05D009851 ORTHO05D008654 8.3e-12 75.1 207 40.1
MELO3C025600.2 Cucumis melo HOM05D007784 ORTHO05D008654 1.8e-11 73.9 222 37.4
Gorai.013G169700 Gossypium raimondii HOM05D007784 ORTHO05D008654 1.8e-11 73.9 177 44.1
Medtr0598s0020 Medicago truncatula HOM05D007784 ORTHO05D008654 2.4e-11 73.6 138 49.3
CAN.G162.41 Capsicum annuum HOM05D007784 ORTHO05D008654 3.1e-11 73.2 215 30.2
Thhalv10021913m.g Eutrema salsugineum HOM05D009851 ORTHO05D008654 4.1e-11 72.8 204 37.3
Sc16g0007130 Simmondsia chinensis HOM05D007784 ORTHO05D008654 4.1e-11 72.8 211 31.8
PGSC0003DMG400012442 Solanum tuberosum HOM05D007784 ORTHO05D008654 4.1e-11 72.8 217 37.8
CsaV3_4G033550 Cucumis sativus L. HOM05D007784 ORTHO05D008654 7.0e-11 72.0 219 38.8
C05p51990 Brassica napus HOM05D009851 ORTHO05D008654 1.6e-10 70.9 206 38.3
Rhsim06G0201400 Rhododendron simsii HOM05D007784 ORTHO05D008654 2.0e-10 70.5 213 40.4
AL3G27640 Arabidopsis lyrata HOM05D009851 ORTHO05D008654 2.7e-10 70.1 228 36.8
CARHR090230 Cardamine hirsuta HOM05D009851 ORTHO05D008654 2.7e-10 70.1 217 29.0
Glyma.06G238300 Glycine max HOM05D007784 ORTHO05D008654 7.7e-10 68.6 211 38.4
BolC5t33884H Brassica oleracea HOM05D009851 ORTHO05D008654 1.3e-09 67.8 206 37.4
Carub.0003s1490 Capsella rubella HOM05D009851 ORTHO05D008654 1.3e-09 67.8 211 37.0
Migut.M00785 Erythranthe guttata HOM05D007784 ORTHO05D008654 1.3e-09 67.8 206 39.3
Duzib170G0657 Durio zibethinus HOM05D007784 ORTHO05D008654 1.7e-09 67.4 198 34.3
Glyma.12G163035 Glycine max HOM05D007784 ORTHO05D008654 2.3e-09 67.0 200 37.0
THA.LOC104810461 Tarenaya hassleriana HOM05D009851 ORTHO05D008654 2.9e-09 66.6 241 27.8
AT3G15250 Arabidopsis thaliana HOM05D009851 ORTHO05D008654 5.0e-09 65.9 220 35.5
A05p34230 Brassica napus HOM05D009851 ORTHO05D008654 5.0e-09 65.9 206 37.4
BraA05t22243Z Brassica rapa HOM05D009851 ORTHO05D008654 5.0e-09 65.9 206 37.4
Ca_23050_v3 Cicer arietinum L. HOM05D007784 ORTHO05D008654 8.6e-09 65.1 194 29.4
DCAR_017127 Daucus carota HOM05D007784 ORTHO05D008654 8.6e-09 65.1 194 36.1
Dinv14932 Davidia involucrata HOM05D007784 ORTHO05D008654 8.6e-09 65.1 62 58.1
PGR083G0236 Punica granatum HOM05D007784 ORTHO05D008654 8.6e-09 65.1 207 30.4
CANSAT56G4083 Cannabis sativa HOM05D007784 ORTHO05D008654 1.1e-08 64.7 232 37.5
Lj3g0015921 Lotus japonicus HOM05D007784 ORTHO05D008654 3.3e-08 63.2 201 34.3
BcaB06g29549 Brassica carinata HOM05D009851 ORTHO05D008654 5.6e-08 62.4 208 35.1
BcaB03g11679 Brassica carinata HOM05D009851 ORTHO05D008654 1.2e-07 61.2 71 52.1
TPR.G18874 Trifolium pratense HOM05D007784 ORTHO05D008654 1.8e-06 57.4 147 31.3
TWI38G0880 Tripterygium wilfordii HOM05D007784 ORTHO05D008654 1.8e-06 57.4 200 34.5
AL1G61530 Arabidopsis lyrata HOM05D009851 ORTHO05D008654 3.0e-06 56.6 61 52.5
Peaxi162Scf00069g01710 Petunia axillaris HOM05D007784 ORTHO05D008654 4.0e-06 56.2 147 36.7
CDE05G1988 Ceratophyllum demersum HOM05D062459 ORTHO05D043886 5.2e-06 55.8 179 32.4
AT1G53163 Arabidopsis thaliana HOM05D009851 ORTHO05D008654 6.8e-06 55.5 61 52.5


User provided reference genes

Program Settings