Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G00005 Aquilegia oxysepala HOM05D000247 ORTHO05D008926 1.3e-32 142.5 72 100.0
MSTRG.7604 Avicennia marina HOM05D000247 ORTHO05D008926 1.1e-17 92.8 72 65.3
CAN.G1299.10 Capsicum annuum HOM05D000247 ORTHO05D008926 1.9e-17 92.0 72 63.9
Hma1.2p1_1207F.1_g267030 Hydrangea macrophylla HOM05D000247 ORTHO05D008926 3.3e-17 91.3 72 61.1
TAR627G0960 Trochodendron aralioides HOM05D000247 ORTHO05D008926 3.3e-17 91.3 72 62.5
unitig_748.g8074 Utricularia gibba HOM05D000247 ORTHO05D008926 4.3e-17 90.9 72 62.5
Nitab4.5_0000443g0110 Nicotiana tabacum HOM05D000247 ORTHO05D008926 7.4e-17 90.1 72 61.1
Nitab4.5_0007772g0020 Nicotiana tabacum HOM05D000247 ORTHO05D008926 9.7e-17 89.7 71 60.6
CDE06G1703 Ceratophyllum demersum HOM05D000247 ORTHO05D008926 1.3e-16 89.4 72 61.1
CiPaw.09G073900 Carya illinoinensis HOM05D000247 ORTHO05D008926 1.6e-16 89.0 71 62.0
Migut.M02000 Erythranthe guttata HOM05D000247 ORTHO05D008926 2.8e-16 88.2 72 62.5
Cc09_g05440 Coffea canephora HOM05D000247 ORTHO05D008926 3.7e-16 87.8 72 61.1
DCAR_007780 Daucus carota HOM05D000247 ORTHO05D008926 3.7e-16 87.8 72 59.7
PGSC0003DMG402010449 Solanum tuberosum HOM05D000247 ORTHO05D008926 4.8e-16 87.4 72 59.7
Solyc02g068500.3 Solanum lycopersicum HOM05D000247 ORTHO05D008926 6.3e-16 87.0 72 59.7
Sopen02g017640 Solanum pennellii HOM05D000247 ORTHO05D008926 6.3e-16 87.0 72 59.7
SGA_v2.0_scaffold175G39349 Striga asiatica HOM05D000247 ORTHO05D008926 8.2e-16 86.7 71 59.2
Lsat_1_v5_gn_8_117960 Lactuca sativa HOM05D000247 ORTHO05D008926 1.1e-15 86.3 71 60.6
Potri.001G159000 Populus trichocarpa HOM05D000247 ORTHO05D008926 1.1e-15 86.3 71 59.2
HPP92_009500 Vanilla planifolia HOM05D000247 ORTHO05D008926 1.1e-15 86.3 70 60.0
GSVIVG01012129001 Vitis vinifera HOM05D000247 ORTHO05D008926 1.1e-15 86.3 71 57.7
GSVIVG01012130001 Vitis vinifera HOM05D000247 ORTHO05D008926 1.1e-15 86.3 71 57.7
Atru.chr10.414 Acer truncatum HOM05D000247 ORTHO05D008926 1.4e-15 85.9 70 62.9
HanXRQChr09g0258391 Helianthus annuus HOM05D000247 ORTHO05D008926 1.4e-15 85.9 72 62.5
Manes.03G075166 Manihot esculenta HOM05D000247 ORTHO05D008926 1.4e-15 85.9 70 58.6
SalBow8G0825 Salvia bowleyana HOM05D032565 ORTHO05D008926 1.8e-15 85.5 72 58.3
THA.LOC104798563 Tarenaya hassleriana HOM05D000247 ORTHO05D008926 2.4e-15 85.1 70 61.4
arahy.Tifrunner.gnm1.ann1.LMJ0T6 Arachis hypogaea HOM05D000247 ORTHO05D008926 4.1e-15 84.3 71 57.7
arahy.Tifrunner.gnm1.ann1.N4QHWM Arachis hypogaea HOM05D000247 ORTHO05D008926 4.1e-15 84.3 71 57.7
DCAR_001289 Daucus carota HOM05D000247 ORTHO05D008926 5.3e-15 84.0 72 55.6
SGA_v2.0_scaffold298G47701 Striga asiatica HOM05D000247 ORTHO05D008926 6.9e-15 83.6 71 56.3
BcaC02g07742 Brassica carinata HOM05D000247 ORTHO05D008926 9.0e-15 83.2 72 61.1
CARHR129170 Cardamine hirsuta HOM05D000247 ORTHO05D008926 9.0e-15 83.2 72 59.7
CsaV3_6G052830 Cucumis sativus L. HOM05D000247 ORTHO05D008926 9.0e-15 83.2 71 56.3
Psat7g088680 Pisum sativum HOM05D000247 ORTHO05D008926 1.2e-14 82.8 71 56.3
Glyma.08G087100 Glycine max HOM05D000247 ORTHO05D008926 1.5e-14 82.4 71 56.3
Sed0006578 Sechium edule HOM05D000247 ORTHO05D008926 1.5e-14 82.4 72 54.2
Glyma.05G132600 Glycine max HOM05D000247 ORTHO05D008926 2.0e-14 82.0 71 54.9
Lj4g0027483 Lotus japonicus HOM05D000247 ORTHO05D008926 2.0e-14 82.0 71 56.3
PSO541G6344 Papaver somniferum HOM05D000247 ORTHO05D008926 2.0e-14 82.0 70 55.7
Nn7g38276 Nelumbo nucifera HOM05D000247 ORTHO05D008926 2.6e-14 81.6 72 55.6
Medtr4g094690 Medicago truncatula HOM05D000247 ORTHO05D008926 3.4e-14 81.3 71 54.9
BraA04t18174Z Brassica rapa HOM05D000247 ORTHO05D008926 4.5e-14 80.9 72 59.7
AT2G35010 Arabidopsis thaliana HOM05D000247 ORTHO05D008926 7.7e-14 80.1 72 56.9
Ciclev10016549m.g Citrus clementina HOM05D000247 ORTHO05D008926 7.7e-14 80.1 69 60.9
TPR.G31242 Trifolium pratense HOM05D000247 ORTHO05D008926 7.7e-14 80.1 71 54.9
Carub.0004s1670 Capsella rubella HOM05D000247 ORTHO05D008926 1.0e-13 79.7 72 55.6
MELO3C007026.2 Cucumis melo HOM05D000247 ORTHO05D008926 1.0e-13 79.7 71 53.5
CANSAT35G1610 Cannabis sativa HOM05D000247 ORTHO05D008926 1.3e-13 79.3 72 55.6
Phvul.002G190200 Phaseolus vulgaris HOM05D000247 ORTHO05D008926 1.3e-13 79.3 71 54.9
AL4G31030 Arabidopsis lyrata HOM05D000247 ORTHO05D008926 1.7e-13 79.0 72 55.6
Sp4g17290 Schrenkiella parvula HOM05D000247 ORTHO05D008926 2.2e-13 78.6 72 56.9
Eucgr.D00028 Eucalyptus grandis HOM05D000247 ORTHO05D008926 2.9e-13 78.2 72 52.8
Thhalv10017264m.g Eutrema salsugineum HOM05D000247 ORTHO05D008926 2.9e-13 78.2 72 56.9
Lalb_Chr07g0188361 Lupinus albus HOM05D000247 ORTHO05D008926 3.8e-13 77.8 71 52.1
FvH4_3g12700 Fragaria vesca HOM05D000247 ORTHO05D008926 5.0e-13 77.4 71 56.3
FAN16G1213 Fragaria x ananassa HOM05D000247 ORTHO05D008926 5.0e-13 77.4 71 56.3
FAN16G3275 Fragaria x ananassa HOM05D000247 ORTHO05D008926 5.0e-13 77.4 72 55.6
FAN25G3094 Fragaria x ananassa HOM05D000247 ORTHO05D008926 6.5e-13 77.0 71 54.9
CARHR030550 Cardamine hirsuta HOM05D000247 ORTHO05D008926 1.1e-12 76.3 72 54.2
MD17G1134000 Malus domestica HOM05D000247 ORTHO05D008926 1.1e-12 76.3 72 55.6
Os06g0665900 Oryza sativa ssp. japonica HOM05D000247 ORTHO05D008926 1.1e-12 76.3 71 50.7
MD10G1228900 Malus domestica HOM05D000247 ORTHO05D008926 1.4e-12 75.9 71 54.9
BcaB06g28813 Brassica carinata HOM05D000247 ORTHO05D008926 1.9e-12 75.5 72 56.9
Carub.0001s2941 Capsella rubella HOM05D000247 ORTHO05D008926 1.9e-12 75.5 72 54.2
Aa31LG2G14990 Aethionema arabicum HOM05D000247 ORTHO05D008926 2.5e-12 75.1 72 54.2
Prupe.4G115800 Prunus persica HOM05D000247 ORTHO05D008926 2.5e-12 75.1 71 53.5
Sp1g26880 Schrenkiella parvula HOM05D000247 ORTHO05D008926 2.5e-12 75.1 72 54.2
PSO675G8821 Papaver somniferum HOM05D000247 ORTHO05D008926 3.2e-12 74.7 80 48.8
AL1G45430 Arabidopsis lyrata HOM05D000247 ORTHO05D008926 5.5e-12 73.9 72 52.8
AT1G31020 Arabidopsis thaliana HOM05D000247 ORTHO05D008926 5.5e-12 73.9 72 52.8
BcaB07g32760 Brassica carinata HOM05D000267 ORTHO05D008926 1.2e-11 72.8 72 51.4
Sc24g0002990 Simmondsia chinensis HOM05D000247 ORTHO05D008926 1.2e-11 72.8 71 47.9
Thhalv10008976m.g Eutrema salsugineum HOM05D000247 ORTHO05D008926 1.6e-11 72.4 72 51.4
SHI32269 Sapria himalayana HOM05D000247 ORTHO05D008926 1.6e-11 72.4 68 50.0
BraA09t39048Z Brassica rapa HOM05D000247 ORTHO05D008926 2.1e-11 72.0 72 50.0
RcHm_v2.0_Chr5g0020681 Rosa chinensis HOM05D000247 ORTHO05D008926 2.1e-11 72.0 71 53.5
BcaC05g27133 Brassica carinata HOM05D000247 ORTHO05D008926 2.7e-11 71.6 72 50.0
A09p35210 Brassica napus HOM05D000247 ORTHO05D008926 2.7e-11 71.6 72 50.0
C05p30180 Brassica napus HOM05D000247 ORTHO05D008926 2.7e-11 71.6 72 50.0
BolC5t31755H Brassica oleracea HOM05D000247 ORTHO05D008926 2.7e-11 71.6 72 50.0
Rhsim13G0129200 Rhododendron simsii HOM05D000247 ORTHO05D008926 2.7e-11 71.6 111 40.5
Hund26669 Selenicereus undatus HOM05D000247 ORTHO05D008926 6.1e-11 70.5 69 53.6
TWI38G1568 Tripterygium wilfordii HOM05D000247 ORTHO05D008926 6.1e-11 70.5 70 47.1
Zm00001eb389850 Zea mays HOM05D000247 ORTHO05D008926 1.0e-10 69.7 71 42.3
ClCG01G025600 Citrullus lanatus HOM05D000247 ORTHO05D008926 5.1e-10 67.4 101 40.6
Thecc.02G276000 Theobroma cacao HOM05D000247 ORTHO05D008926 6.7e-10 67.0 70 48.6
QL11p013075 Quercus lobata HOM05D000247 ORTHO05D008926 1.5e-09 65.9 61 54.1
Gorai.005G169900 Gossypium raimondii HOM05D000247 ORTHO05D008926 3.7e-08 61.2 70 41.4
Gohir.D02G151400 Gossypium hirsutum HOM05D000247 ORTHO05D008926 4.8e-08 60.8 70 41.4
arahy.Tifrunner.gnm1.ann1.ZI5CY8 Arachis hypogaea HOM05D001920 ORTHO05D004895 6.3e-08 60.5 72 45.8
PGR004G1671 Punica granatum HOM05D000247 ORTHO05D008926 8.2e-08 60.1 72 45.8
COL.COLO4_12826 Corchorus olitorius HOM05D000247 ORTHO05D008926 1.1e-07 59.7 69 40.6
Dinv04337 Davidia involucrata HOM05D000247 ORTHO05D008926 1.4e-07 59.3 72 44.4
Gohir.A03G128000 Gossypium hirsutum HOM05D000247 ORTHO05D008926 1.4e-07 59.3 70 40.0
FAN21G2895 Fragaria x ananassa HOM05D000247 ORTHO05D008926 6.9e-07 57.0 71 45.1
MD05G1092600 Malus domestica HOM05D000247 ORTHO05D008926 6.9e-07 57.0 72 45.8
MD15G1415300 Malus domestica HOM05D000247 ORTHO05D008926 9.1e-07 56.6 70 40.0
AagrBONN_evm.TU.Sc2ySwM_344.2317 Anthoceros agrestis HOM05D030025 ORTHO05D026625 1.5e-06 55.8 64 37.5
MBI02_g26994_MAGBIO Magnolia biondii HOM05D000247 ORTHO05D008926 2.6e-06 55.1 33 75.8
PSO675G1907 Papaver somniferum HOM05D000247 ORTHO05D008926 2.6e-06 55.1 70 44.3
Ah.15g091910 Amaranthus hybridus HOM05D000247 ORTHO05D008926 3.4e-06 54.7 69 46.4
Haze_06153 Corylus avellana HOM05D000247 ORTHO05D008926 4.5e-06 54.3 70 45.7
CBR_g57886 Chara braunii HOM05D000247 ORTHO05D000288 5.9e-06 53.9 68 39.7
Peaxi162Scf00199g00089 Petunia axillaris HOM05D000247 ORTHO05D008926 7.7e-06 53.5 33 69.7


User provided reference genes

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