Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy4G03322 Aquilegia oxysepala HOM05D005900 ORTHO05D007306 3.6e-80 301.6 161 100.0
Aqoxy83s001 Aquilegia oxysepala HOM05D005900 ORTHO05D007306 4.1e-76 288.1 158 97.5
Aqoxy4G02969 Aquilegia oxysepala HOM05D005900 ORTHO05D007306 6.0e-75 284.3 156 96.8
Aqoxy2G04193 Aquilegia oxysepala HOM05D005900 ORTHO05D007306 1.1e-65 253.4 137 98.5
GSVIVG01001102001 Vitis vinifera HOM05D005900 ORTHO05D007306 1.8e-18 96.7 156 42.9
QL03p048972 Quercus lobata HOM05D005900 ORTHO05D007306 5.1e-18 95.1 152 42.1
Ca_23210_v3 Cicer arietinum L. HOM05D005900 ORTHO05D007306 8.8e-18 94.4 159 41.5
PSO170G6181 Papaver somniferum HOM05D005900 ORTHO05D007306 1.5e-17 93.6 161 41.6
DCAR_030841 Daucus carota HOM05D005900 ORTHO05D007306 9.7e-17 90.9 142 43.0
Sopen09g004610 Solanum pennellii HOM05D005900 ORTHO05D007306 9.7e-17 90.9 155 41.3
vmacro15379 Vaccinium macrocarpon HOM05D005900 ORTHO05D007306 9.7e-17 90.9 178 39.3
Dinv35828 Davidia involucrata HOM05D005900 ORTHO05D007306 1.3e-16 90.5 126 42.1
CANSAT80G1963 Cannabis sativa HOM05D005900 ORTHO05D007306 2.2e-16 89.7 126 45.2
Medtr8g012410 Medicago truncatula HOM05D005900 ORTHO05D007306 2.2e-16 89.7 159 37.1
Ca_13888_v3 Cicer arietinum L. HOM05D005900 ORTHO05D007306 4.8e-16 88.6 159 40.3
Prupe.1G213900 Prunus persica HOM05D005900 ORTHO05D007306 6.3e-16 88.2 170 39.4
CANSAT80G1771 Cannabis sativa HOM05D005900 ORTHO05D007306 8.2e-16 87.8 126 44.4
Dinv16498 Davidia involucrata HOM05D005900 ORTHO05D007306 8.2e-16 87.8 148 40.5
PGSC0003DMG400008953 Solanum tuberosum HOM05D005900 ORTHO05D007306 1.1e-15 87.4 155 40.6
COL.COLO4_27171 Corchorus olitorius HOM05D005900 ORTHO05D007306 1.4e-15 87.0 167 37.7
Solyc09g009850.4 Solanum lycopersicum HOM05D005900 ORTHO05D007306 2.4e-15 86.3 155 40.0
PSO017G3279 Papaver somniferum HOM05D005900 ORTHO05D007306 3.1e-15 85.9 160 39.4
Aqoxy4G00002 Aquilegia oxysepala HOM05D005900 ORTHO05D007306 4.1e-15 85.5 45 95.6
CiPaw.03G184600 Carya illinoinensis HOM05D005900 ORTHO05D007306 6.9e-15 84.7 136 39.0
TAR629G1598 Trochodendron aralioides HOM05D005900 ORTHO05D007306 6.9e-15 84.7 168 36.3
CsaV3_4G033440 Cucumis sativus L. HOM05D005900 ORTHO05D007306 9.1e-15 84.3 148 37.8
PGSC0003DMG400022718 Solanum tuberosum HOM05D005900 ORTHO05D007306 9.1e-15 84.3 158 40.5
Thecc.02G191100 Theobroma cacao HOM05D005900 ORTHO05D007306 9.1e-15 84.3 165 38.2
CDE09G0879 Ceratophyllum demersum HOM05D005900 ORTHO05D007306 1.5e-14 83.6 164 38.4
MBI11_g07033_MAGBIO Magnolia biondii HOM05D005900 ORTHO05D007306 2.0e-14 83.2 177 38.4
CSS0005312 Camellia sinensis var. sinensis HOM05D005900 ORTHO05D007306 2.6e-14 82.8 147 40.8
Atru.chr12.1436 Acer truncatum HOM05D005900 ORTHO05D007306 3.4e-14 82.4 105 44.8
Solyc01g008760.4 Solanum lycopersicum HOM05D005900 ORTHO05D007306 3.4e-14 82.4 152 40.8
CiPaw.05G100400 Carya illinoinensis HOM05D005900 ORTHO05D007306 4.5e-14 82.0 159 36.5
Gorai.002G021100 Gossypium raimondii HOM05D005900 ORTHO05D007306 7.7e-14 81.3 170 34.7
Ciclev10005823m.g Citrus clementina HOM05D005900 ORTHO05D007306 1.0e-13 80.9 173 36.4
TAR371G1211 Trochodendron aralioides HOM05D005900 ORTHO05D007306 1.0e-13 80.9 158 38.0
Sed0015511 Sechium edule HOM05D005900 ORTHO05D007306 1.7e-13 80.1 147 38.1
Eucgr.B02910 Eucalyptus grandis HOM05D005900 ORTHO05D007306 2.2e-13 79.7 148 39.9
MSTRG.22403 Avicennia marina HOM05D005900 ORTHO05D007306 3.8e-13 79.0 168 39.9
Glyma.13G175800 Glycine max HOM05D005900 ORTHO05D007306 3.8e-13 79.0 160 35.0
Oeu055297.1 Olea europaea HOM05D005900 ORTHO05D007306 3.8e-13 79.0 166 39.2
PGR102G3094 Punica granatum HOM05D005900 ORTHO05D007306 3.8e-13 79.0 140 39.3
ClCG11G017800 Citrullus lanatus HOM05D005900 ORTHO05D007306 5.0e-13 78.6 147 35.4
Hma1.2p1_1494F.1_g286930 Hydrangea macrophylla HOM05D005900 ORTHO05D007306 5.0e-13 78.6 187 34.2
Peaxi162Scf00698g00117 Petunia axillaris HOM05D005900 ORTHO05D007306 5.0e-13 78.6 165 37.0
BcaC03g18270 Brassica carinata HOM05D005900 ORTHO05D007306 6.5e-13 78.2 151 38.4
Cpa.g.sc36.199 Carica papaya HOM05D005900 ORTHO05D007306 8.5e-13 77.8 148 35.1
Haze_24259 Corylus avellana HOM05D005900 ORTHO05D007306 1.1e-12 77.4 172 38.4
Sabra01G0047700 Salix brachista HOM05D005900 ORTHO05D007306 1.1e-12 77.4 131 38.2
Gohir.A01G020300 Gossypium hirsutum HOM05D005900 ORTHO05D007306 1.4e-12 77.0 159 34.0
Gohir.D01G018900 Gossypium hirsutum HOM05D005900 ORTHO05D007306 1.4e-12 77.0 170 33.5
Psat4g204640 Pisum sativum HOM05D005900 ORTHO05D007306 1.4e-12 77.0 158 38.0
Eucgr.E01503 Eucalyptus grandis HOM05D005900 ORTHO05D007306 1.9e-12 76.6 119 42.9
A02p43400 Brassica napus HOM05D005900 ORTHO05D007306 2.5e-12 76.3 151 37.7
SGA_v2.0_scaffold154G37193 Striga asiatica HOM05D005900 ORTHO05D007306 2.5e-12 76.3 168 38.1
vmacro01013 Vaccinium macrocarpon HOM05D005900 ORTHO05D007306 2.5e-12 76.3 162 38.3
Cc04_g15880 Coffea canephora HOM05D005900 ORTHO05D007306 3.2e-12 75.9 170 35.3
BraA02t09265Z Brassica rapa HOM05D005900 ORTHO05D007306 4.2e-12 75.5 150 38.0
SGA_v2.0_scaffold28G11983 Striga asiatica HOM05D005900 ORTHO05D007306 4.2e-12 75.5 168 38.1
C02p63500 Brassica napus HOM05D005900 ORTHO05D007306 5.5e-12 75.1 151 37.1
Zm00001eb127900 Zea mays HOM05D005900 ORTHO05D007306 7.2e-12 74.7 155 33.5
Nitab4.5_0000059g0460 Nicotiana tabacum HOM05D005900 ORTHO05D007306 9.4e-12 74.3 159 36.5
Os08g0422600 Oryza sativa ssp. japonica HOM05D005900 ORTHO05D007306 1.2e-11 73.9 155 35.5
Sp2g27740 Schrenkiella parvula HOM05D005900 ORTHO05D007306 1.2e-11 73.9 153 32.7
Sc06g0007790 Simmondsia chinensis HOM05D005900 ORTHO05D007306 1.2e-11 73.9 163 34.4
TWI36G0396 Tripterygium wilfordii HOM05D005900 ORTHO05D007306 1.2e-11 73.9 149 36.9
BcaB07g29751 Brassica carinata HOM05D005900 ORTHO05D007306 1.6e-11 73.6 157 36.3
BolC2t12415H Brassica oleracea HOM05D005900 ORTHO05D007306 1.6e-11 73.6 152 38.2
Cfa011664 Carpinus fangiana HOM05D005900 ORTHO05D007306 1.6e-11 73.6 174 36.2
Migut.C00405 Erythranthe guttata HOM05D005900 ORTHO05D007306 1.6e-11 73.6 155 36.8
FvH4_4g22530 Fragaria vesca HOM05D005900 ORTHO05D007306 1.6e-11 73.6 158 38.0
FAN12G4206 Fragaria x ananassa HOM05D005900 ORTHO05D007306 1.6e-11 73.6 158 38.0
MD13G1131700 Malus domestica HOM05D005900 ORTHO05D007306 1.6e-11 73.6 163 35.0
RcHm_v2.0_Chr4g0428761 Rosa chinensis HOM05D005900 ORTHO05D007306 1.6e-11 73.6 138 35.5
FAN07G0479 Fragaria x ananassa HOM05D005900 ORTHO05D007306 2.1e-11 73.2 168 34.5
VMungo0251G3272 Vigna mungo HOM05D005900 ORTHO05D007306 2.1e-11 73.2 162 35.8
Aa31LG1G17260 Aethionema arabicum HOM05D005900 ORTHO05D007306 2.7e-11 72.8 167 31.7
Cfa010215 Carpinus fangiana HOM05D005900 ORTHO05D007306 2.7e-11 72.8 167 35.9
Potri.001G068500 Populus trichocarpa HOM05D005900 ORTHO05D007306 2.7e-11 72.8 131 36.6
CSS0033783 Camellia sinensis var. sinensis HOM05D005900 ORTHO05D007306 3.6e-11 72.4 151 37.1
Nitab4.5_0000191g0220 Nicotiana tabacum HOM05D005900 ORTHO05D007306 4.7e-11 72.0 156 37.2
FAN17G1441 Fragaria x ananassa HOM05D005900 ORTHO05D007306 8.0e-11 71.2 119 41.2
MD16G1142000 Malus domestica HOM05D005900 ORTHO05D007306 8.0e-11 71.2 163 34.4
SalBow2G0170 Salvia bowleyana HOM05D005900 ORTHO05D007306 8.0e-11 71.2 128 36.7
Migut.C01115 Erythranthe guttata HOM05D005900 ORTHO05D007306 1.0e-10 70.9 152 34.9
Glyma.07G200400 Glycine max HOM05D005900 ORTHO05D007306 1.0e-10 70.9 162 34.0
Lsat_1_v5_gn_2_95001 Lactuca sativa HOM05D005900 ORTHO05D007306 1.0e-10 70.9 139 36.0
AUR62006518 Chenopodium quinoa HOM05D005900 ORTHO05D007306 1.8e-10 70.1 147 36.1
TPR.G16445 Trifolium pratense HOM05D005900 ORTHO05D007306 2.3e-10 69.7 160 37.5
VMungo0331G1117 Vigna mungo HOM05D005900 ORTHO05D007306 2.3e-10 69.7 162 34.6
Hund20854 Selenicereus undatus HOM05D005900 ORTHO05D007306 5.2e-10 68.6 128 37.5
ECA238G4295 Erigeron canadensis HOM05D005900 ORTHO05D007306 6.7e-10 68.2 137 38.0
Phvul.002G231200 Phaseolus vulgaris HOM05D005900 ORTHO05D007306 6.7e-10 68.2 159 33.3
arahy.Tifrunner.gnm1.ann1.UQH0GN Arachis hypogaea HOM05D005900 ORTHO05D007306 8.8e-10 67.8 159 33.3
AUR62025013 Chenopodium quinoa HOM05D005900 ORTHO05D007306 8.8e-10 67.8 163 35.0
Lalb_Chr15g0079851 Lupinus albus HOM05D005900 ORTHO05D007306 8.8e-10 67.8 129 33.3
Os01g0259900 Oryza sativa ssp. japonica HOM05D005900 ORTHO05D007306 8.8e-10 67.8 165 33.3
arahy.Tifrunner.gnm1.ann1.5NZU5R Arachis hypogaea HOM05D005900 ORTHO05D007306 1.5e-09 67.0 158 31.0
BolC6t39862H Brassica oleracea HOM05D005900 ORTHO05D007306 1.5e-09 67.0 111 37.8
Rhsim12G0016500 Rhododendron simsii HOM05D005900 ORTHO05D007306 2.0e-09 66.6 173 36.4
Thhalv10004934m.g Eutrema salsugineum HOM05D005900 ORTHO05D007306 2.6e-09 66.2 139 35.3
BcaC08g46818 Brassica carinata HOM05D005900 ORTHO05D007306 3.3e-09 65.9 107 38.3
TWI18G0365 Tripterygium wilfordii HOM05D005900 ORTHO05D007306 3.3e-09 65.9 126 38.1
C03p61480 Brassica napus HOM05D005900 ORTHO05D007306 4.4e-09 65.5 146 32.9
BcaB04g19984 Brassica carinata HOM05D005900 ORTHO05D007306 7.4e-09 64.7 118 35.6
MELO3C032361.2 Cucumis melo HOM05D005900 ORTHO05D007306 1.3e-08 63.9 135 34.1
Lj3g0021746 Lotus japonicus HOM05D005900 ORTHO05D007306 1.3e-08 63.9 167 31.7
EL10Ac1g01696 Beta vulgaris HOM05D005900 ORTHO05D007306 2.2e-08 63.2 150 32.7
Oeu001539.2 Olea europaea HOM05D005900 ORTHO05D007306 1.4e-07 60.5 223 29.6
Peaxi162Scf00079g01513 Petunia axillaris HOM05D005900 ORTHO05D007306 2.4e-07 59.7 193 31.6
THA.LOC104799437 Tarenaya hassleriana HOM05D005900 ORTHO05D007306 1.6e-06 57.0 144 31.9


User provided reference genes

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