Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy4G03316 Aquilegia oxysepala HOM05D007521 ORTHO05D009387 9.5e-109 397.1 207 100.0
PSO384G1785 Papaver somniferum HOM05D007521 ORTHO05D009387 3.9e-62 242.3 213 62.0
Nn2g10221 Nelumbo nucifera HOM05D007521 ORTHO05D009387 8.7e-62 241.1 210 60.5
TAR636G2090 Trochodendron aralioides HOM05D007521 ORTHO05D009387 7.4e-61 238.0 211 60.7
PSO339G2910 Papaver somniferum HOM05D007521 ORTHO05D009387 2.8e-60 236.1 213 60.1
GSVIVG01032870001 Vitis vinifera HOM05D007521 ORTHO05D009387 8.4e-57 224.6 205 58.0
Dinv34514 Davidia involucrata HOM05D007521 ORTHO05D009387 1.6e-55 220.3 216 57.9
MD07G1238600 Malus domestica HOM05D007521 ORTHO05D009387 3.9e-54 215.7 222 59.0
Cc02_g04870 Coffea canephora HOM05D007521 ORTHO05D009387 6.7e-54 214.9 210 56.2
Prupe.2G267400 Prunus persica HOM05D007521 ORTHO05D009387 8.7e-54 214.5 220 57.3
vmacro09945 Vaccinium macrocarpon HOM05D006307 ORTHO05D008123 1.5e-53 213.8 207 57.5
Actinidia31757 Actinidia chinensis HOM05D007521 ORTHO05D009387 1.9e-53 213.4 200 58.0
Lsat_1_v5_gn_8_11100 Lactuca sativa HOM05D007521 ORTHO05D009387 2.2e-52 209.9 179 62.0
Cc02_g05020 Coffea canephora HOM05D007521 ORTHO05D009387 3.7e-52 209.1 210 56.7
ATR1127G230 Amborella trichopoda HOM05D007521 ORTHO05D009387 4.8e-52 208.8 210 56.7
Migut.F00560 Erythranthe guttata HOM05D007521 ORTHO05D009387 8.2e-52 208.0 210 53.3
ECA233G6052 Erigeron canadensis HOM05D007521 ORTHO05D009387 1.8e-51 206.8 200 57.0
Potri.019G065400 Populus trichocarpa HOM05D007521 ORTHO05D009387 2.0e-50 203.4 225 52.9
Lj1g0021108 Lotus japonicus HOM05D007521 ORTHO05D009387 2.6e-50 203.0 205 57.6
Ciclev10033598m.g Citrus clementina HOM05D007521 ORTHO05D009387 4.5e-50 202.2 210 56.2
FvH4_7g26320 Fragaria vesca HOM05D007521 ORTHO05D009387 7.7e-50 201.4 220 54.1
FAN10G3062 Fragaria x ananassa HOM05D007521 ORTHO05D009387 7.7e-50 201.4 220 53.6
RcHm_v2.0_Chr1g0372781 Rosa chinensis HOM05D007521 ORTHO05D009387 7.7e-50 201.4 222 53.6
TPR.G13979 Trifolium pratense HOM05D007521 ORTHO05D009387 1.7e-49 200.3 207 56.0
CiPaw.08G156100 Carya illinoinensis HOM05D007521 ORTHO05D009387 2.2e-49 199.9 223 52.9
TWI09G0709 Tripterygium wilfordii HOM05D007521 ORTHO05D009387 3.8e-49 199.1 205 55.6
Gorai.009G291900 Gossypium raimondii HOM05D007521 ORTHO05D009387 8.5e-49 198.0 212 52.8
Gohir.D05G278400 Gossypium hirsutum HOM05D007521 ORTHO05D009387 1.1e-48 197.6 212 51.9
PGSC0003DMG400011658 Solanum tuberosum HOM05D007521 ORTHO05D009387 1.4e-48 197.2 215 52.1
QL08p065346 Quercus lobata HOM05D007521 ORTHO05D009387 3.2e-48 196.1 224 51.8
Medtr3g093540 Medicago truncatula HOM05D007521 ORTHO05D009387 4.2e-48 195.7 200 56.0
FAN06G0083 Fragaria x ananassa HOM05D007521 ORTHO05D009387 1.6e-47 193.7 229 52.0
HanXRQChr08g0223011 Helianthus annuus HOM05D007521 ORTHO05D009387 2.7e-47 193.0 198 53.5
Gohir.A05G276700 Gossypium hirsutum HOM05D007521 ORTHO05D009387 6.1e-47 191.8 212 51.9
CANSAT56G2803 Cannabis sativa HOM05D007521 ORTHO05D009387 7.9e-47 191.4 212 52.4
Lalb_Chr11g0067611 Lupinus albus HOM05D007521 ORTHO05D009387 1.8e-46 190.3 209 52.2
Duzib114G0131 Durio zibethinus HOM05D007521 ORTHO05D009387 2.3e-46 189.9 213 50.7
Nitab4.5_0011372g0030 Nicotiana tabacum HOM05D007521 ORTHO05D009387 3.0e-46 189.5 211 50.7
MSTRG.8869 Avicennia marina HOM05D007521 ORTHO05D009387 1.1e-45 187.6 210 50.0
Sc11g0006120 Simmondsia chinensis HOM05D007521 ORTHO05D009387 1.1e-45 187.6 204 49.0
Thecc.10G187600 Theobroma cacao HOM05D007521 ORTHO05D009387 3.3e-45 186.0 212 52.4
PGR142G4361 Punica granatum HOM05D007521 ORTHO05D009387 1.4e-43 180.6 211 51.2
Eucgr.G03172 Eucalyptus grandis HOM05D007521 ORTHO05D009387 3.1e-43 179.5 215 51.2
Ca_16847_v3 Cicer arietinum L. HOM05D006307 ORTHO05D008123 5.3e-43 178.7 183 56.8
unitig_37.g11916 Utricularia gibba HOM05D007521 ORTHO05D009387 5.3e-43 178.7 198 50.5
Atru.BG.268.p Acer truncatum HOM05D007521 ORTHO05D009387 9.1e-43 177.9 190 54.2
Cpa.g.sc65.80 Carica papaya HOM05D007521 ORTHO05D009387 3.4e-42 176.0 199 52.3
Glyma.04G224700 Glycine max HOM05D007521 ORTHO05D009387 3.4e-42 176.0 180 57.8
Hma1.2p1_0264F.1_g105770 Hydrangea macrophylla HOM05D007521 ORTHO05D009387 3.4e-42 176.0 219 50.7
Psat5g070120 Pisum sativum HOM05D007521 ORTHO05D009387 4.5e-42 175.6 206 51.9
Nitab4.5_0000375g0330 Nicotiana tabacum HOM05D007521 ORTHO05D009387 5.9e-42 175.3 223 46.2
Phvul.009G041300 Phaseolus vulgaris HOM05D007521 ORTHO05D009387 5.9e-42 175.3 181 57.5
VMungo1309G1947 Vigna mungo HOM05D006307 ORTHO05D008123 5.9e-42 175.3 176 56.8
EL10Ac2g02694 Beta vulgaris HOM05D007521 ORTHO05D009387 4.2e-40 169.1 203 48.8
Sabra19G0079100 Salix brachista HOM05D007521 ORTHO05D009387 4.2e-40 169.1 220 48.6
arahy.Tifrunner.gnm1.ann1.Q2LGCQ Arachis hypogaea HOM05D007521 ORTHO05D009387 1.6e-39 167.2 178 53.9
CDE11G1245 Ceratophyllum demersum HOM05D007521 ORTHO05D009387 2.1e-39 166.8 153 60.8
CSS0047724 Camellia sinensis var. sinensis HOM05D007521 ORTHO05D009387 1.8e-38 163.7 151 62.3
SGA_v2.0_scaffold60G20871 Striga asiatica HOM05D006307 ORTHO05D008123 2.3e-38 163.3 225 45.3
THA.LOC104811673 Tarenaya hassleriana HOM05D007521 ORTHO05D009387 1.5e-37 160.6 188 52.1
CiPaw.08G155800 Carya illinoinensis HOM05D007521 ORTHO05D009387 2.6e-37 159.8 224 46.9
HPP92_019762 Vanilla planifolia HOM05D007521 ORTHO05D009387 1.8e-35 153.7 167 52.7
Carub.0007s2116 Capsella rubella HOM05D007521 ORTHO05D009387 5.3e-35 152.1 198 47.5
A01p11790 Brassica napus HOM05D007521 ORTHO05D009387 4.5e-34 149.1 186 48.9
BraA01t01121Z Brassica rapa HOM05D007521 ORTHO05D009387 7.7e-34 148.3 189 49.7
C01p13990 Brassica napus HOM05D007521 ORTHO05D009387 1.0e-33 147.9 197 45.7
BolC1t01366H Brassica oleracea HOM05D007521 ORTHO05D009387 1.0e-33 147.9 197 45.7
AL7G33920 Arabidopsis lyrata HOM05D007521 ORTHO05D009387 1.7e-33 147.1 198 48.5
Sp7g18440 Schrenkiella parvula HOM05D007521 ORTHO05D009387 2.2e-33 146.7 213 45.5
BcaC09g51354 Brassica carinata HOM05D007521 ORTHO05D009387 3.8e-33 146.0 189 49.2
Zm00001eb284340 Zea mays HOM05D007521 ORTHO05D009387 6.5e-33 145.2 178 50.6
DCAR_018052 Daucus carota HOM05D006307 ORTHO05D009387 8.5e-33 144.8 159 54.7
BcaNung01738 Brassica carinata HOM05D007521 ORTHO05D009387 1.9e-32 143.7 208 45.2
Peaxi162Scf00167g01120 Petunia axillaris HOM05D007521 ORTHO05D009387 2.5e-32 143.3 154 50.0
CARHR226760 Cardamine hirsuta HOM05D007521 ORTHO05D009387 4.2e-32 142.5 209 44.5
Aa31LG6G2400 Aethionema arabicum HOM05D007521 ORTHO05D009387 3.6e-31 139.4 212 41.5
Pp3c3_11210 Physcomitrium patens HOM05D007521 ORTHO05D009387 8.0e-31 138.3 194 41.8
Mapoly0070s0078 Marchantia polymorpha HOM05D007521 ORTHO05D009387 1.3e-28 131.0 208 38.9
arahy.Tifrunner.gnm1.ann1.RI9J7M Arachis hypogaea HOM05D006307 ORTHO05D008123 1.7e-28 130.6 196 44.9
Actinidia07775 Actinidia chinensis HOM05D007521 ORTHO05D009387 1.4e-27 127.5 156 50.6
AagrBONN_evm.TU.Sc2ySwM_228.2023 Anthoceros agrestis HOM05D007521 ORTHO05D009387 1.2e-23 114.4 175 40.6
Lj8C51T1 Lonicera japonica HOM05D007521 ORTHO05D009387 4.7e-23 112.5 114 57.9
Cfa001178 Carpinus fangiana HOM05D007521 ORTHO05D009387 8.0e-23 111.7 127 52.0
Ah.12g064700 Amaranthus hybridus HOM05D007521 ORTHO05D009387 1.8e-22 110.5 86 64.0
SEGI_30344 Sequoiadendron giganteum HOM05D007521 ORTHO05D009387 2.3e-22 110.2 131 47.3
Oeu001369.2 Olea europaea HOM05D007521 ORTHO05D009387 4.8e-20 102.4 124 48.4
SMO356G0638 Selaginella moellendorffii HOM05D007521 ORTHO05D009387 1.1e-19 101.3 178 37.6
COL.COLO4_19497 Corchorus olitorius HOM05D007521 ORTHO05D009387 2.0e-18 97.1 122 50.8
Gohir.D10G155835 Gossypium hirsutum HOM05D007521 ORTHO05D009387 2.7e-18 96.7 78 61.5
Sopen05g030700 Solanum pennellii HOM05D007521 ORTHO05D009387 2.7e-18 96.7 122 47.5
Solyc05g052170.4 Solanum lycopersicum HOM05D007521 ORTHO05D009387 3.5e-18 96.3 122 47.5
Manes.10G004400 Manihot esculenta HOM05D007521 ORTHO05D009387 1.1e-16 91.3 126 50.0
Hund13426 Selenicereus undatus HOM05D007521 ORTHO05D009387 6.1e-15 85.5 196 34.2
Gorai.011G175800 Gossypium raimondii HOM05D007521 ORTHO05D009387 2.3e-14 83.6 76 55.3
Gohir.D11G050600 Gossypium hirsutum HOM05D007521 ORTHO05D009387 6.8e-14 82.0 70 57.1
Cre10.g464264 Chlamydomonas reinhardtii HOM05D007521 ORTHO05D009387 1.2e-13 81.3 89 42.7
CBR_g4502 Chara braunii HOM05D007521 ORTHO05D009387 2.0e-13 80.5 84 45.2
Gorai.007G054900 Gossypium raimondii HOM05D007521 ORTHO05D009387 1.3e-12 77.8 69 55.1
SEGI_20264 Sequoiadendron giganteum HOM05D007521 ORTHO05D009387 1.8e-11 73.9 68 52.9
AT4G19985 Arabidopsis thaliana HOM05D007521 ORTHO05D009387 3.5e-10 69.7 138 40.6
Thhalv10026093m.g Eutrema salsugineum HOM05D007521 ORTHO05D009387 7.7e-10 68.6 135 37.8
Hma1.2p1_0264F.1_g105780 Hydrangea macrophylla HOM05D007521 ORTHO05D009387 1.5e-08 64.3 51 62.7
Hma1.2p1_0264F.1_g105790 Hydrangea macrophylla HOM05D007521 ORTHO05D009387 3.3e-08 63.2 106 43.4
TPR.G2655 Trifolium pratense HOM05D003003 ORTHO05D009423 5.6e-08 62.4 165 28.5
AagrBONN_evm.TU.Sc2ySwM_228.1890 Anthoceros agrestis HOM05D003003 ORTHO05D031171 2.1e-07 60.5 138 34.8
AagrBONN_evm.TU.Sc2ySwM_368.1216 Anthoceros agrestis HOM05D003003 ORTHO05D009423 3.6e-07 59.7 87 36.8
CSS0035077 Camellia sinensis var. sinensis HOM05D003003 ORTHO05D009423 4.7e-07 59.3 169 26.6
Migut.J00015 Erythranthe guttata HOM05D003003 ORTHO05D008343 4.7e-07 59.3 114 33.3
CiPaw.05G119600 Carya illinoinensis HOM05D003003 ORTHO05D009423 6.1e-07 58.9 130 30.8
FvH4_4g28730 Fragaria vesca HOM05D003003 ORTHO05D009423 6.1e-07 58.9 130 29.2
FAN07G2271 Fragaria x ananassa HOM05D003003 ORTHO05D009423 6.1e-07 58.9 130 29.2
FAN12G0971 Fragaria x ananassa HOM05D003003 ORTHO05D009423 6.1e-07 58.9 130 29.2
FAN17G1234 Fragaria x ananassa HOM05D003003 ORTHO05D009423 6.1e-07 58.9 130 29.2
FAN22G2066 Fragaria x ananassa HOM05D003003 ORTHO05D009423 6.1e-07 58.9 130 29.2
VMungo1383G2339 Vigna mungo HOM05D003003 ORTHO05D008343 6.1e-07 58.9 150 29.3
Manes.13G005500 Manihot esculenta HOM05D003003 ORTHO05D009423 8.0e-07 58.5 128 29.7
Solyc10g074910.2 Solanum lycopersicum HOM05D003003 ORTHO05D008343 8.0e-07 58.5 114 33.3
Sopen10g027400 Solanum pennellii HOM05D003003 ORTHO05D008343 8.0e-07 58.5 114 33.3
Medtr1g018030 Medicago truncatula HOM05D003003 ORTHO05D009423 1.0e-06 58.2 127 32.3
Nn4g23601 Nelumbo nucifera HOM05D003003 ORTHO05D009423 1.0e-06 58.2 128 28.9
unitig_27.g24893 Utricularia gibba HOM05D003003 ORTHO05D008343 1.4e-06 57.8 73 39.7
ClCG05G023360 Citrullus lanatus HOM05D003003 ORTHO05D009423 1.8e-06 57.4 162 28.4
HanXRQChr01g0000501 Helianthus annuus HOM05D003003 ORTHO05D008343 1.8e-06 57.4 114 32.5
PRCOL_00002630 Prasinoderma coloniale HOM05D003003 ORTHO05D009387 1.8e-06 57.4 118 28.0
CAN.G659.15 Capsicum annuum HOM05D003003 ORTHO05D008343 2.3e-06 57.0 114 32.5
ClCG04G006230 Citrullus lanatus HOM05D003003 ORTHO05D008343 2.3e-06 57.0 116 32.8
MELO3C012182.2 Cucumis melo HOM05D003003 ORTHO05D009423 2.3e-06 57.0 162 27.8
CsaV3_5G033650 Cucumis sativus L. HOM05D003003 ORTHO05D009423 2.3e-06 57.0 162 27.8
Nitab4.5_0001215g0150 Nicotiana tabacum HOM05D003003 ORTHO05D008343 2.3e-06 57.0 114 31.6
Peaxi162Scf00374g00029 Petunia axillaris HOM05D003003 ORTHO05D008343 2.3e-06 57.0 114 32.5
Prupe.1G298700 Prunus persica HOM05D003003 ORTHO05D009423 2.3e-06 57.0 87 34.5
Sed0024487 Sechium edule HOM05D003003 ORTHO05D008343 2.3e-06 57.0 114 31.6
vmacro10450 Vaccinium macrocarpon HOM05D003003 ORTHO05D009423 2.3e-06 57.0 163 27.0
CsaV3_4G027340 Cucumis sativus L. HOM05D003003 ORTHO05D008343 3.0e-06 56.6 116 32.8
Psat0s871g0080 Pisum sativum HOM05D003003 ORTHO05D009423 3.0e-06 56.6 128 29.7
VMungo0540G0138 Vigna mungo HOM05D003003 ORTHO05D009423 3.0e-06 56.6 128 29.7
Carub.0001s3039 Capsella rubella HOM05D003003 ORTHO05D008343 4.0e-06 56.2 115 32.2
Ciclev10032841m.g Citrus clementina HOM05D003003 ORTHO05D009423 4.0e-06 56.2 128 28.9
Glyma.02G126500 Glycine max HOM05D003003 ORTHO05D009423 4.0e-06 56.2 128 28.9
MD13G1053400 Malus domestica HOM05D003003 ORTHO05D009423 4.0e-06 56.2 87 34.5
MCO12G079 Micromonas commoda HOM05D003003 ORTHO05D008343 4.0e-06 56.2 75 38.7
SEGI_32854 Sequoiadendron giganteum HOM05D003003 ORTHO05D008343 4.0e-06 56.2 145 29.7
THA.LOC104806235 Tarenaya hassleriana HOM05D003003 ORTHO05D008343 4.0e-06 56.2 114 32.5
Aa31LG2G13930 Aethionema arabicum HOM05D003003 ORTHO05D008343 5.2e-06 55.8 114 32.5
Ah.03g139670 Amaranthus hybridus HOM05D003003 ORTHO05D009423 5.2e-06 55.8 174 26.4
AT1G32070 Arabidopsis thaliana HOM05D003003 ORTHO05D008343 5.2e-06 55.8 115 32.2
Cc06_g00240 Coffea canephora HOM05D003003 ORTHO05D008343 5.2e-06 55.8 114 31.6
Lj2g0011014 Lotus japonicus HOM05D003003 ORTHO05D009423 5.2e-06 55.8 128 29.7
MBI15_g27839_MAGBIO Magnolia biondii HOM05D003003 ORTHO05D009423 5.2e-06 55.8 87 36.8
MD04G1177300 Malus domestica HOM05D003003 ORTHO05D008343 5.2e-06 55.8 76 36.8
Nitab4.5_0007589g0030 Nicotiana tabacum HOM05D003003 ORTHO05D008343 5.2e-06 55.8 114 30.7
EL10Ac6g14605 Beta vulgaris HOM05D003003 ORTHO05D009423 6.8e-06 55.5 174 25.3
EL10Ac7g17135 Beta vulgaris HOM05D003003 ORTHO05D008343 6.8e-06 55.5 73 38.4
AUR62029798 Chenopodium quinoa HOM05D003003 ORTHO05D008343 6.8e-06 55.5 73 38.4
Ca_07787_v3 Cicer arietinum L. HOM05D003003 ORTHO05D008343 6.8e-06 55.5 114 30.7
Cc11_g11250 Coffea canephora HOM05D003003 ORTHO05D009423 6.8e-06 55.5 128 28.9
DCAR_023966 Daucus carota HOM05D003003 ORTHO05D008343 6.8e-06 55.5 114 30.7
Migut.L01135 Erythranthe guttata HOM05D003003 ORTHO05D009423 6.8e-06 55.5 128 31.2
Eucgr.K01296 Eucalyptus grandis HOM05D003003 ORTHO05D008343 6.8e-06 55.5 116 34.5
Lalb_Chr03g0043871 Lupinus albus HOM05D003003 ORTHO05D008343 6.8e-06 55.5 114 30.7
Potri.008G113600 Populus trichocarpa HOM05D003003 ORTHO05D009423 6.8e-06 55.5 128 28.9
PGR004G0262 Punica granatum HOM05D003003 ORTHO05D008343 6.8e-06 55.5 118 32.2
PGR102G0555 Punica granatum HOM05D003003 ORTHO05D009423 6.8e-06 55.5 128 28.9
Aa31LG7G8770 Aethionema arabicum HOM05D003003 ORTHO05D009423 8.9e-06 55.1 85 34.1
Cpa.g.sc53.6 Carica papaya HOM05D003003 ORTHO05D009423 8.9e-06 55.1 128 29.7
Eucgr.B03096 Eucalyptus grandis HOM05D003003 ORTHO05D009423 8.9e-06 55.1 128 29.7
FAN14G2421 Fragaria x ananassa HOM05D003003 ORTHO05D008343 8.9e-06 55.1 114 32.5
Gohir.D13G090000 Gossypium hirsutum HOM05D003003 ORTHO05D009423 8.9e-06 55.1 85 35.3
Gorai.013G103300 Gossypium raimondii HOM05D003003 ORTHO05D009423 8.9e-06 55.1 85 35.3
Medtr7g073990 Medicago truncatula HOM05D003003 ORTHO05D008343 8.9e-06 55.1 116 32.8
MCO10G123 Micromonas commoda HOM05D003003 ORTHO05D009387 8.9e-06 55.1 73 38.4
Phvul.006G034800 Phaseolus vulgaris HOM05D003003 ORTHO05D009423 8.9e-06 55.1 128 28.9
Phvul.006G035000 Phaseolus vulgaris HOM05D003003 ORTHO05D009423 8.9e-06 55.1 128 28.9
QL07p031603 Quercus lobata HOM05D003003 ORTHO05D008343 8.9e-06 55.1 114 31.6
THA.LOC104821982 Tarenaya hassleriana HOM05D003003 ORTHO05D009423 8.9e-06 55.1 85 34.1
HPP92_005299 Vanilla planifolia HOM05D003003 ORTHO05D009423 8.9e-06 55.1 94 31.9


User provided reference genes

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