Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy4G03306 Aquilegia oxysepala HOM05D004172 ORTHO05D006010 0.0e+00 1143.3 601 100.0
MBI15_g31039_MAGBIO Magnolia biondii HOM05D004172 ORTHO05D006010 1.4e-262 909.4 593 80.8
Dinv16944 Davidia involucrata HOM05D004172 ORTHO05D006010 6.8e-257 890.6 590 78.5
Nn5g26794 Nelumbo nucifera HOM05D004172 ORTHO05D006010 6.8e-257 890.6 565 81.6
Dinv21399 Davidia involucrata HOM05D004172 ORTHO05D006010 2.4e-254 882.1 590 78.3
PSO017G1041 Papaver somniferum HOM05D004172 ORTHO05D006010 1.3e-252 876.3 601 78.2
PSO170G1455 Papaver somniferum HOM05D004172 ORTHO05D006010 7.3e-251 870.5 597 77.6
CANSAT55G0003 Cannabis sativa HOM05D004172 ORTHO05D006010 1.2e-250 869.8 589 77.4
RcHm_v2.0_Chr3g0459921 Rosa chinensis HOM05D004172 ORTHO05D006010 1.1e-249 866.7 589 76.9
TAR633G1329 Trochodendron aralioides HOM05D004172 ORTHO05D006010 1.8e-249 865.9 567 80.8
Hma1.2p1_0106F.1_g051180 Hydrangea macrophylla HOM05D004172 ORTHO05D006010 2.0e-248 862.4 590 76.4
PSO502G0022 Papaver somniferum HOM05D004172 ORTHO05D006010 2.0e-248 862.4 597 77.1
FvH4_6g09450 Fragaria vesca HOM05D004172 ORTHO05D006010 9.8e-248 860.1 590 76.3
Glyma.18G217100 Glycine max HOM05D004172 ORTHO05D006010 1.3e-247 859.8 574 77.7
FAN09G2297 Fragaria x ananassa HOM05D004172 ORTHO05D006010 6.4e-247 857.4 590 76.1
FAN14G3054 Fragaria x ananassa HOM05D004172 ORTHO05D006010 8.3e-247 857.1 590 76.1
Lalb_Chr07g0195761 Lupinus albus HOM05D004172 ORTHO05D006010 1.9e-246 855.9 566 78.8
Prupe.6G297500 Prunus persica HOM05D004172 ORTHO05D006010 4.1e-246 854.7 590 76.4
Glyma.09G271900 Glycine max HOM05D004172 ORTHO05D006010 7.1e-246 854.0 560 78.6
Phvul.008G079500 Phaseolus vulgaris HOM05D004172 ORTHO05D006010 7.1e-246 854.0 560 78.8
Sed0001307 Sechium edule HOM05D004172 ORTHO05D006010 9.2e-246 853.6 565 78.4
Eucgr.K01297 Eucalyptus grandis HOM05D004172 ORTHO05D006010 6.0e-245 850.9 591 76.6
Psat3g117200 Pisum sativum HOM05D004172 ORTHO05D006010 7.8e-245 850.5 584 75.2
QL07p031617 Quercus lobata HOM05D004172 ORTHO05D006010 1.3e-244 849.7 578 77.3
FAN02G3863 Fragaria x ananassa HOM05D004172 ORTHO05D006010 1.7e-244 849.4 590 75.3
Medtr7g074060 Medicago truncatula HOM05D004172 ORTHO05D006010 5.1e-244 847.8 596 74.5
VMungo1383G2431 Vigna mungo HOM05D004172 ORTHO05D006010 1.5e-243 846.3 560 77.9
Lj1g0013582 Lotus japonicus HOM05D004172 ORTHO05D006010 1.9e-243 845.9 597 74.5
QL07p031284 Quercus lobata HOM05D004172 ORTHO05D006010 1.9e-243 845.9 596 75.5
CSS0013897 Camellia sinensis var. sinensis HOM05D004172 ORTHO05D006010 4.3e-243 844.7 596 75.0
CiPaw.10G166300 Carya illinoinensis HOM05D004172 ORTHO05D006010 4.3e-243 844.7 564 78.9
Cfa017003 Carpinus fangiana HOM05D004172 ORTHO05D006010 9.5e-243 843.6 598 74.9
Manes.09G122000 Manihot esculenta HOM05D004172 ORTHO05D006010 9.5e-243 843.6 595 74.8
Potri.006G111200 Populus trichocarpa HOM05D004172 ORTHO05D006010 9.5e-243 843.6 594 74.6
MD12G1192900 Malus domestica HOM05D004172 ORTHO05D006010 2.1e-242 842.4 590 74.6
Rhsim04G0120600 Rhododendron simsii HOM05D004172 ORTHO05D006010 2.8e-242 842.0 590 75.4
ClCG04G006210 Citrullus lanatus HOM05D004172 ORTHO05D006010 3.6e-242 841.6 565 78.1
CsaV3_4G027360 Cucumis sativus L. HOM05D004172 ORTHO05D006010 1.4e-241 839.7 590 75.1
MELO3C025255.2 Cucumis melo HOM05D004172 ORTHO05D006010 2.3e-241 839.0 565 77.9
MD04G1177600 Malus domestica HOM05D004172 ORTHO05D006010 2.3e-241 839.0 594 74.4
TAR636G0443 Trochodendron aralioides HOM05D004172 ORTHO05D006010 1.2e-240 836.6 596 75.7
Ca_07790_v3 Cicer arietinum L. HOM05D004172 ORTHO05D006010 2.0e-240 835.9 585 74.2
PGR004G2490 Punica granatum HOM05D004172 ORTHO05D006010 2.6e-240 835.5 593 75.2
Duzib151G0210 Durio zibethinus HOM05D004172 ORTHO05D006010 5.8e-240 834.3 591 75.0
Thecc.04G148100 Theobroma cacao HOM05D004172 ORTHO05D006010 9.9e-240 833.6 592 74.7
TPR.G24292 Trifolium pratense HOM05D004172 ORTHO05D006010 1.7e-239 832.8 596 73.7
Cpa.g.sc0.76 Carica papaya HOM05D004172 ORTHO05D006010 2.9e-239 832.0 592 74.8
MSTRG.5032 Avicennia marina HOM05D004172 ORTHO05D006010 6.4e-239 830.9 596 73.3
Manes.08G168300 Manihot esculenta HOM05D004172 ORTHO05D006010 8.4e-239 830.5 591 73.8
GSVIVG01029868001 Vitis vinifera HOM05D004172 ORTHO05D006010 8.4e-239 830.5 508 84.1
TWI53G0780 Tripterygium wilfordii HOM05D004172 ORTHO05D006010 1.1e-238 830.1 598 73.9
Atru.chr8.66 Acer truncatum HOM05D004172 ORTHO05D006010 1.9e-238 829.3 593 75.2
Gorai.011G125600 Gossypium raimondii HOM05D004172 ORTHO05D006010 1.9e-238 829.3 594 74.7
Gohir.A10G152400 Gossypium hirsutum HOM05D004172 ORTHO05D006010 3.2e-238 828.6 585 74.9
Peaxi162Scf00019g00011 Petunia axillaris HOM05D004172 ORTHO05D006010 5.4e-238 827.8 589 74.0
Lj7P587T8 Lonicera japonica HOM05D004172 ORTHO05D006010 9.2e-238 827.0 587 74.1
Sabra04G0157100 Salix brachista HOM05D004172 ORTHO05D006010 1.2e-237 826.6 630 71.0
Ciclev10011331m.g Citrus clementina HOM05D004172 ORTHO05D006010 1.6e-237 826.2 590 74.7
arahy.Tifrunner.gnm1.ann1.5JF3JJ Arachis hypogaea HOM05D004172 ORTHO05D006010 2.7e-237 825.5 576 75.5
Phvul.010G059200 Phaseolus vulgaris HOM05D004172 ORTHO05D006010 2.7e-237 825.5 566 76.1
Gohir.D10G113800 Gossypium hirsutum HOM05D004172 ORTHO05D006010 7.8e-237 823.9 594 73.9
VMungo0331G1250 Vigna mungo HOM05D004172 ORTHO05D006010 2.3e-236 822.4 566 76.1
arahy.Tifrunner.gnm1.ann1.3N9KBA Arachis hypogaea HOM05D004172 ORTHO05D006010 3.0e-236 822.0 575 75.0
Gohir.A02G001800 Gossypium hirsutum HOM05D004172 ORTHO05D006010 3.9e-236 821.6 599 73.8
SalBow6G2214 Salvia bowleyana HOM05D004172 ORTHO05D006010 5.1e-236 821.2 599 73.0
THA.LOC104806653 Tarenaya hassleriana HOM05D004172 ORTHO05D006010 5.1e-236 821.2 563 76.0
arahy.Tifrunner.gnm1.ann1.VH0VRX Arachis hypogaea HOM05D004172 ORTHO05D006010 6.6e-236 820.8 597 73.0
Nitab4.5_0006228g0020 Nicotiana tabacum HOM05D004172 ORTHO05D006010 1.1e-235 820.1 569 75.4
arahy.Tifrunner.gnm1.ann1.SQ7DBT Arachis hypogaea HOM05D004172 ORTHO05D006010 1.5e-235 819.7 575 75.0
Oeu006559.1 Olea europaea HOM05D004172 ORTHO05D006010 1.6e-234 816.2 620 71.5
Nitab4.5_0000707g0290 Nicotiana tabacum HOM05D004172 ORTHO05D006010 2.1e-234 815.8 569 74.5
PGSC0003DMG400006857 Solanum tuberosum HOM05D004172 ORTHO05D006010 1.4e-233 813.1 596 72.0
Gohir.D02G002100 Gossypium hirsutum HOM05D004172 ORTHO05D006010 1.8e-233 812.8 599 73.1
Gorai.005G002600 Gossypium raimondii HOM05D004172 ORTHO05D006010 3.1e-233 812.0 599 73.1
Lalb_Chr01g0023931 Lupinus albus HOM05D004172 ORTHO05D006010 3.1e-233 812.0 597 71.9
Solyc01g087530.3 Solanum lycopersicum HOM05D004172 ORTHO05D006010 4.4e-232 808.1 596 71.6
CARHR082950 Cardamine hirsuta HOM05D004172 ORTHO05D006010 5.8e-232 807.7 592 72.0
Sopen01g034500 Solanum pennellii HOM05D004172 ORTHO05D006010 5.8e-232 807.7 596 71.6
Carub.0003s0778 Capsella rubella HOM05D004172 ORTHO05D006010 9.9e-232 807.0 592 72.0
Sc20g0007210 Simmondsia chinensis HOM05D004172 ORTHO05D006010 9.9e-232 807.0 563 73.7
THA.LOC104823330 Tarenaya hassleriana HOM05D004172 ORTHO05D006010 9.9e-232 807.0 600 71.8
ECA248G2273 Erigeron canadensis HOM05D004172 ORTHO05D006010 2.9e-231 805.4 599 72.8
Haze_21203 Corylus avellana HOM05D004172 ORTHO05D006010 3.8e-231 805.1 698 64.2
Thhalv10020349m.g Eutrema salsugineum HOM05D004172 ORTHO05D006010 1.1e-230 803.5 592 71.8
BraA03t12811Z Brassica rapa HOM05D004172 ORTHO05D006010 4.2e-230 801.6 594 71.5
Aa31LG5G18700 Aethionema arabicum HOM05D004172 ORTHO05D006010 7.1e-230 800.8 596 71.8
BolC3t16675H Brassica oleracea HOM05D004172 ORTHO05D006010 9.3e-230 800.4 594 71.4
CAN.G219.48 Capsicum annuum HOM05D004172 ORTHO05D006010 1.2e-229 800.0 596 71.3
DCAR_029461 Daucus carota HOM05D004172 ORTHO05D006010 1.2e-229 800.0 601 72.2
A05p40120 Brassica napus HOM05D004172 ORTHO05D006010 2.1e-229 799.3 565 74.5
BolC5t34577H Brassica oleracea HOM05D004172 ORTHO05D006010 4.6e-229 798.1 593 71.7
Os05g0316100 Oryza sativa ssp. japonica HOM05D004172 ORTHO05D006010 6.0e-229 797.7 593 70.3
A03p36430 Brassica napus HOM05D004172 ORTHO05D006010 1.0e-228 797.0 595 71.8
C05p59200 Brassica napus HOM05D004172 ORTHO05D006010 1.0e-228 797.0 593 71.8
BolC1t05497H Brassica oleracea HOM05D004172 ORTHO05D006010 1.0e-228 797.0 592 71.6
Sp3g07090 Schrenkiella parvula HOM05D004172 ORTHO05D006010 1.0e-228 797.0 592 70.6
AT3G08650 Arabidopsis thaliana HOM05D004172 ORTHO05D006010 1.3e-228 796.6 592 71.1
AL3G19650 Arabidopsis lyrata HOM05D004172 ORTHO05D006010 2.3e-228 795.8 592 70.8
Actinidia20804 Actinidia chinensis HOM05D004172 ORTHO05D006010 3.0e-228 795.4 585 73.3
BcaC09g47981 Brassica carinata HOM05D004172 ORTHO05D006010 5.1e-228 794.7 593 71.7
Migut.N01780 Erythranthe guttata HOM05D004172 ORTHO05D006010 6.6e-228 794.3 597 72.5
BcaB04g21247 Brassica carinata HOM05D004172 ORTHO05D006010 8.7e-228 793.9 593 71.2
BNapus_Darmor_BZH_scaffold_167p00070 Brassica napus HOM05D004172 ORTHO05D006010 1.9e-227 792.7 591 71.1
Sabra06G0086400 Salix brachista HOM05D004172 ORTHO05D006010 2.5e-227 792.3 699 62.4
ATR1127G216 Amborella trichopoda HOM05D004172 ORTHO05D006010 8.1e-226 787.3 569 73.5
Cc02_g28240 Coffea canephora HOM05D004172 ORTHO05D006010 1.8e-225 786.2 509 79.6
BcaC05g29600 Brassica carinata HOM05D004172 ORTHO05D006010 5.3e-225 784.6 564 74.1
AUR62029801 Chenopodium quinoa HOM05D004172 ORTHO05D006010 1.2e-224 783.5 591 69.7
CDE09G1233 Ceratophyllum demersum HOM05D004172 ORTHO05D006010 1.5e-224 783.1 580 70.9
Hund03687 Selenicereus undatus HOM05D004172 ORTHO05D006010 7.6e-224 780.8 567 72.1
BcaC01g04188 Brassica carinata HOM05D004172 ORTHO05D006010 1.9e-222 776.2 594 70.2
HPP92_026424 Vanilla planifolia HOM05D004172 ORTHO05D006010 7.1e-222 774.2 596 68.3
AUR62006448 Chenopodium quinoa HOM05D004172 ORTHO05D006010 1.2e-221 773.5 591 69.2
EL10Ac7g17137 Beta vulgaris HOM05D004172 ORTHO05D006010 9.6e-219 763.8 597 67.5
Oeu049006.1 Olea europaea HOM05D004172 ORTHO05D006010 1.6e-218 763.1 600 69.3
Ah.15g089820 Amaranthus hybridus HOM05D004172 ORTHO05D006010 2.8e-218 762.3 591 67.0
Zm00001eb408330 Zea mays HOM05D004172 ORTHO05D006010 4.2e-214 748.4 526 74.1
SHI12946 Sapria himalayana HOM05D004172 ORTHO05D006010 1.9e-206 723.0 591 67.2
Lsat_1_v5_gn_1_105840 Lactuca sativa HOM05D004172 ORTHO05D006010 1.1e-203 713.8 608 64.6
Potri.016G140500 Populus trichocarpa HOM05D004172 ORTHO05D006010 2.4e-193 679.5 590 63.6
CDE08G0114 Ceratophyllum demersum HOM05D004172 ORTHO05D006010 1.7e-191 673.3 448 78.6
SEGI_23896 Sequoiadendron giganteum HOM05D004172 ORTHO05D006010 2.0e-187 659.8 480 71.2
unitig_747.g21293 Utricularia gibba HOM05D004172 ORTHO05D006010 3.4e-184 649.0 503 69.2
HanXRQChr01g0016071 Helianthus annuus HOM05D004172 ORTHO05D006010 6.3e-178 628.2 431 78.2
SMO337G0001 Selaginella moellendorffii HOM05D004172 ORTHO05D006010 1.9e-166 590.1 532 61.1
vmacro08954 Vaccinium macrocarpon HOM05D004172 ORTHO05D006010 7.2e-166 588.2 505 66.3
C03p44040 Brassica napus HOM05D004172 ORTHO05D006010 8.6e-151 538.1 383 74.7
Pp3c6_18720 Physcomitrium patens HOM05D004172 ORTHO05D006010 4.0e-148 529.3 546 53.7
BraA01t04334Z Brassica rapa HOM05D004172 ORTHO05D006010 1.4e-140 504.2 370 71.1
CiPaw.09G223100 Carya illinoinensis HOM05D004172 ORTHO05D006010 2.6e-131 473.4 581 53.7
SGA_v2.0_scaffold5G02963 Striga asiatica HOM05D004172 ORTHO05D006010 1.4e-129 467.6 316 78.2
Actinidia32576 Actinidia chinensis HOM05D004172 ORTHO05D006010 3.0e-127 459.9 398 64.8
CSS0016172 Camellia sinensis var. sinensis HOM05D004172 ORTHO05D006010 7.3e-118 428.7 309 74.1
Mapoly0092s0078 Marchantia polymorpha HOM05D004172 ORTHO05D006010 2.9e-114 416.8 519 47.2
COL.COLO4_05675 Corchorus olitorius HOM05D004172 ORTHO05D006010 1.4e-113 414.5 252 83.7
CBR_g164 Chara braunii HOM05D004172 ORTHO05D006010 3.2e-97 360.1 555 41.8
BcaB04g18578 Brassica carinata HOM05D004172 ORTHO05D006010 1.8e-92 344.4 227 75.8
Actinidia28546 Actinidia chinensis HOM05D004172 ORTHO05D006010 7.1e-89 332.4 228 78.9
SEGI_22351 Sequoiadendron giganteum HOM05D004172 ORTHO05D006010 3.7e-77 293.5 183 80.3
C03p44050 Brassica napus HOM05D004172 ORTHO05D006010 1.3e-66 258.5 208 65.4
MCO09G526 Micromonas commoda HOM05D004172 ORTHO05D006010 3.0e-63 247.3 239 53.1
Cre06.g281900 Chlamydomonas reinhardtii HOM05D004172 ORTHO05D006010 2.0e-59 234.6 245 47.8
PRCOL_00003523 Prasinoderma coloniale HOM05D004172 ORTHO05D006010 1.5e-49 201.8 273 44.0
Medtr3g094870 Medicago truncatula HOM05D004172 ORTHO05D006010 1.9e-49 201.4 113 85.8
CSS0001306 Camellia sinensis var. sinensis HOM05D004172 ORTHO05D000002 5.2e-39 166.8 119 70.6
HanXRQChr04g0127351 Helianthus annuus HOM05D004172 ORTHO05D006010 1.1e-33 149.1 137 62.0
SEGI_04146 Sequoiadendron giganteum HOM05D004172 ORTHO05D006010 1.2e-27 129.0 205 43.4
QL07p004777 Quercus lobata HOM05D004172 ORTHO05D039478 2.1e-19 101.7 186 39.2
RcHm_v2.0_Chr3g0459981 Rosa chinensis HOM05D004172 ORTHO05D018193 6.0e-19 100.1 105 50.5
Actinidia32575 Actinidia chinensis HOM05D004172 ORTHO05D006010 1.7e-18 98.6 50 86.0
C02p50100 Brassica napus HOM05D004172 ORTHO05D018193 9.5e-17 92.8 52 90.4
BolC2t11086H Brassica oleracea HOM05D004172 ORTHO05D018193 9.5e-17 92.8 52 90.4
RcHm_v2.0_Chr3g0460031 Rosa chinensis HOM05D004172 ORTHO05D018193 1.2e-16 92.4 103 49.5
BcaC02g10326 Brassica carinata HOM05D004172 ORTHO05D023965 1.1e-15 89.4 81 59.3
HanXRQChr11g0335241 Helianthus annuus HOM05D004172 ORTHO05D006010 1.8e-15 88.6 52 88.5
SEGI_20309 Sequoiadendron giganteum HOM05D004172 ORTHO05D006010 3.7e-13 80.9 57 71.9
TAR633G1452 Trochodendron aralioides HOM05D004172 ORTHO05D414170 5.6e-09 67.0 57 54.4
C03p65240 Brassica napus HOM05D004172 ORTHO05D018193 4.7e-08 63.9 60 60.0
BolC3t18777H Brassica oleracea HOM05D004172 ORTHO05D018193 4.7e-08 63.9 60 60.0
C04p30290 Brassica napus HOM05D004172 ORTHO05D023965 6.2e-08 63.5 61 55.7
BolC4t24562H Brassica oleracea HOM05D004172 ORTHO05D023965 6.2e-08 63.5 61 55.7
C01p21620 Brassica napus HOM05D004172 ORTHO05D023965 6.8e-07 60.1 61 54.1
BcaC09g50722 Brassica carinata HOM05D004172 ORTHO05D023965 1.5e-06 58.9 56 57.1


User provided reference genes

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