Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy4G03284 Aquilegia oxysepala HOM05D006410 ORTHO05D007914 2.2e-197 692.2 373 100.0
PSO339G1476 Papaver somniferum HOM05D006410 ORTHO05D007914 9.6e-84 314.7 392 52.3
PSO384G4459 Papaver somniferum HOM05D006410 ORTHO05D007914 1.4e-82 310.8 241 68.0
TAR633G1493 Trochodendron aralioides HOM05D006410 ORTHO05D007914 2.0e-81 307.0 302 61.9
Atru.chr8.91 Acer truncatum HOM05D006410 ORTHO05D007914 3.2e-79 299.7 332 57.2
Dinv16966 Davidia involucrata HOM05D006410 ORTHO05D007914 3.5e-78 296.2 232 69.0
GSVIVG01030169001 Vitis vinifera HOM05D006410 ORTHO05D007914 3.5e-78 296.2 293 59.7
Potri.006G109500 Populus trichocarpa HOM05D006410 ORTHO05D007914 2.5e-76 290.0 383 52.5
Manes.09G123200 Manihot esculenta HOM05D006410 ORTHO05D007914 4.3e-76 289.3 403 47.9
Ciclev10012138m.g Citrus clementina HOM05D006410 ORTHO05D007914 2.1e-75 287.0 234 67.5
Rhsim05G0231700 Rhododendron simsii HOM05D006410 ORTHO05D007914 8.1e-75 285.0 290 59.0
Sabra06G0085200 Salix brachista HOM05D006410 ORTHO05D007914 1.4e-74 284.3 328 55.5
PGR004G0643 Punica granatum HOM05D006410 ORTHO05D007914 5.3e-74 282.3 235 63.4
TWI77G0542 Tripterygium wilfordii HOM05D006410 ORTHO05D007914 5.3e-74 282.3 345 53.3
COL.COLO4_03931 Corchorus olitorius HOM05D006410 ORTHO05D007914 2.6e-73 280.0 277 61.0
Cfa013491 Carpinus fangiana HOM05D006410 ORTHO05D007914 9.9e-73 278.1 296 58.1
Eucgr.J00376 Eucalyptus grandis HOM05D006410 ORTHO05D007914 1.3e-72 277.7 260 61.2
Eucgr.G01626 Eucalyptus grandis HOM05D006410 ORTHO05D007914 2.2e-72 276.9 260 61.2
Eucgr.A00566 Eucalyptus grandis HOM05D006410 ORTHO05D007914 6.4e-72 275.4 262 61.1
Eucgr.G00130 Eucalyptus grandis HOM05D006410 ORTHO05D007914 6.4e-72 275.4 260 60.8
Eucgr.H04867 Eucalyptus grandis HOM05D006410 ORTHO05D007914 6.4e-72 275.4 223 66.8
QL07p031892 Quercus lobata HOM05D006410 ORTHO05D007914 6.4e-72 275.4 334 53.9
CiPaw.10G165500 Carya illinoinensis HOM05D006410 ORTHO05D007914 1.4e-71 274.2 381 48.8
Prupe.6G295400 Prunus persica HOM05D006410 ORTHO05D007914 1.9e-71 273.9 354 50.3
Nn2g10260 Nelumbo nucifera HOM05D006410 ORTHO05D007914 2.4e-71 273.5 289 57.1
HanXRQChr15g0464751 Helianthus annuus HOM05D006410 ORTHO05D007914 3.2e-71 273.1 335 50.1
Actinidia20795 Actinidia chinensis HOM05D006410 ORTHO05D007914 5.4e-71 272.3 225 65.3
Haze_22079 Corylus avellana HOM05D006410 ORTHO05D007914 7.1e-71 271.9 384 48.4
CDE04G0338 Ceratophyllum demersum HOM05D006410 ORTHO05D007914 2.7e-70 270.0 298 53.0
vmacro20378 Vaccinium macrocarpon HOM05D006410 ORTHO05D007914 4.6e-70 269.2 311 55.0
Duzib212G0115 Durio zibethinus HOM05D006410 ORTHO05D007914 6.0e-70 268.9 254 63.0
Eucgr.K01292 Eucalyptus grandis HOM05D006410 ORTHO05D007914 5.1e-69 265.8 395 45.8
MD04G1175900 Malus domestica HOM05D006410 ORTHO05D007914 1.1e-68 264.6 406 46.1
Thecc.04G150000 Theobroma cacao HOM05D006410 ORTHO05D007914 1.1e-68 264.6 252 59.9
arahy.Tifrunner.gnm1.ann1.K0FU58 Arachis hypogaea HOM05D006410 ORTHO05D007914 1.5e-68 264.2 247 60.3
ECA247G0827 Erigeron canadensis HOM05D006410 ORTHO05D007914 1.5e-68 264.2 259 57.5
FvH4_6g09660 Fragaria vesca HOM05D006410 ORTHO05D007914 1.9e-68 263.8 390 47.4
VMungo1383G1039 Vigna mungo HOM05D006410 ORTHO05D007914 1.9e-68 263.8 259 58.3
Sopen10g035110 Solanum pennellii HOM05D006410 ORTHO05D007914 3.3e-68 263.1 387 46.3
Solyc10g085690.2 Solanum lycopersicum HOM05D006410 ORTHO05D007914 4.3e-68 262.7 389 45.8
arahy.Tifrunner.gnm1.ann1.LV5WBC Arachis hypogaea HOM05D006410 ORTHO05D007914 7.4e-68 261.9 247 59.1
Gorai.005G003500 Gossypium raimondii HOM05D006410 ORTHO05D007914 7.4e-68 261.9 269 57.6
RcHm_v2.0_Chr3g0460291 Rosa chinensis HOM05D006410 ORTHO05D007914 7.4e-68 261.9 401 44.6
FAN05G4204 Fragaria x ananassa HOM05D006410 ORTHO05D007914 9.6e-68 261.5 396 47.2
FAN14G0316 Fragaria x ananassa HOM05D006410 ORTHO05D007914 9.6e-68 261.5 271 57.6
Glyma.18G212900 Glycine max HOM05D006410 ORTHO05D007914 9.6e-68 261.5 266 57.9
Gohir.D02G003000 Gossypium hirsutum HOM05D006410 ORTHO05D007914 9.6e-68 261.5 269 58.0
FAN09G0831 Fragaria x ananassa HOM05D006410 ORTHO05D007914 1.3e-67 261.2 273 58.2
Hma1.2p1_0537F.1_g174300 Hydrangea macrophylla HOM05D006410 ORTHO05D007914 1.6e-67 260.8 234 59.8
Phvul.008G081500 Phaseolus vulgaris HOM05D006410 ORTHO05D007914 1.1e-66 258.1 327 51.1
CsaV3_4G027230 Cucumis sativus L. HOM05D006410 ORTHO05D007914 1.8e-66 257.3 310 53.2
Glyma.09G273700 Glycine max HOM05D006410 ORTHO05D007914 1.8e-66 257.3 239 60.7
Lsat_1_v5_gn_9_39501 Lactuca sativa HOM05D006410 ORTHO05D007914 1.8e-66 257.3 331 49.5
Lalb_Chr03g0043841 Lupinus albus HOM05D006410 ORTHO05D007914 3.1e-66 256.5 243 60.5
CAN.G1018.3 Capsicum annuum HOM05D006410 ORTHO05D007914 4.0e-66 256.1 382 44.8
FAN02G1808 Fragaria x ananassa HOM05D006410 ORTHO05D007914 4.0e-66 256.1 396 46.5
ClCG04G006320 Citrullus lanatus HOM05D006410 ORTHO05D007914 5.3e-66 255.8 284 57.0
MSTRG.5489 Avicennia marina HOM05D006410 ORTHO05D007914 1.2e-65 254.6 229 59.8
Nitab4.5_0009611g0010 Nicotiana tabacum HOM05D006410 ORTHO05D007914 3.4e-65 253.1 288 51.7
TPR.G24331 Trifolium pratense HOM05D006410 ORTHO05D007914 3.4e-65 253.1 268 54.9
Psat3g118640 Pisum sativum HOM05D006410 ORTHO05D007914 7.6e-65 251.9 268 55.2
Gohir.A02G002700 Gossypium hirsutum HOM05D006410 ORTHO05D007914 1.3e-64 251.1 269 56.1
Peaxi162Scf00146g01120 Petunia axillaris HOM05D006410 ORTHO05D007914 1.3e-64 251.1 382 46.1
MD12G1190300 Malus domestica HOM05D006410 ORTHO05D007914 1.7e-64 250.8 384 45.8
Medtr7g073510 Medicago truncatula HOM05D006410 ORTHO05D007914 3.8e-64 249.6 349 48.1
Thhalv10017800m.g Eutrema salsugineum HOM05D006410 ORTHO05D007914 6.4e-64 248.8 213 62.9
EL10Ac7g17116 Beta vulgaris HOM05D006410 ORTHO05D007914 1.1e-63 248.1 227 59.9
Lj1g0017463 Lotus japonicus HOM05D006410 ORTHO05D007914 2.4e-63 246.9 241 57.3
SalBow5G5142 Salvia bowleyana HOM05D006410 ORTHO05D007914 3.2e-63 246.5 327 49.8
THA.LOC104806212 Tarenaya hassleriana HOM05D006410 ORTHO05D007914 1.6e-62 244.2 182 67.0
HPP92_026801 Vanilla planifolia HOM05D006410 ORTHO05D007914 2.7e-62 243.4 283 51.6
HPP92_000776 Vanilla planifolia HOM05D006410 ORTHO05D007914 6.0e-62 242.3 283 51.2
Cc06_g00300 Coffea canephora HOM05D006410 ORTHO05D007914 3.9e-61 239.6 291 52.6
Nitab4.5_0000381g0170 Nicotiana tabacum HOM05D006410 ORTHO05D007914 3.9e-61 239.6 420 41.2
ATR1127G206 Amborella trichopoda HOM05D006410 ORTHO05D007914 8.7e-61 238.4 376 44.4
CANSAT21G1321 Cannabis sativa HOM05D006410 ORTHO05D007914 4.3e-60 236.1 384 45.6
Carub.0004s2056 Capsella rubella HOM05D006410 ORTHO05D007914 2.1e-59 233.8 204 62.3
AL4G35850 Arabidopsis lyrata HOM05D006410 ORTHO05D007914 6.2e-59 232.3 224 59.4
AT2G38570 Arabidopsis thaliana HOM05D006410 ORTHO05D007914 1.4e-58 231.1 183 66.1
arahy.Tifrunner.gnm1.ann1.2Y9ZDG Arachis hypogaea HOM05D006410 ORTHO05D007914 5.3e-58 229.2 244 55.7
AUR62029781 Chenopodium quinoa HOM05D006410 ORTHO05D007914 6.9e-58 228.8 344 44.5
Sc07g0005960 Simmondsia chinensis HOM05D006410 ORTHO05D007914 1.2e-57 228.0 214 57.5
A03p21390 Brassica napus HOM05D006410 ORTHO05D007914 2.0e-57 227.3 174 67.8
BcaB01g03675 Brassica carinata HOM05D006410 ORTHO05D007914 3.4e-57 226.5 236 57.6
CARHR133250 Cardamine hirsuta HOM05D006410 ORTHO05D007914 4.5e-57 226.1 230 59.1
Zm00001eb395200 Zea mays HOM05D006410 ORTHO05D007914 1.7e-56 224.2 278 50.4
BcaC01g05529 Brassica carinata HOM05D006410 ORTHO05D007914 2.2e-56 223.8 227 57.7
BolC3t14920H Brassica oleracea HOM05D006410 ORTHO05D007914 2.2e-56 223.8 227 57.7
BraA03t11374Z Brassica rapa HOM05D006410 ORTHO05D007914 3.8e-56 223.0 337 45.4
Hund19754 Selenicereus undatus HOM05D006410 ORTHO05D007914 3.8e-56 223.0 248 53.6
Sp4g20910 Schrenkiella parvula HOM05D006410 ORTHO05D007914 6.5e-56 222.2 360 43.1
arahy.Tifrunner.gnm1.ann1.A09QMR Arachis hypogaea HOM05D006410 ORTHO05D007914 5.5e-55 219.2 175 65.1
C03p25260 Brassica napus HOM05D006410 ORTHO05D007914 3.5e-54 216.5 344 44.2
Lj3A940G60 Lonicera japonica HOM05D006410 ORTHO05D007914 1.3e-53 214.5 309 47.6
SEGI_21416 Sequoiadendron giganteum HOM05D006410 ORTHO05D007914 6.7e-53 212.2 286 45.1
arahy.Tifrunner.gnm1.ann1.PEH6CG Arachis hypogaea HOM05D006410 ORTHO05D007914 1.3e-51 208.0 232 55.6
SGA_v2.0_scaffold85G26601 Striga asiatica HOM05D006410 ORTHO05D007914 2.8e-51 206.8 411 39.2
SalBow5G0627 Salvia bowleyana HOM05D006410 ORTHO05D007914 2.2e-48 197.2 182 59.9
Ca_07767_v3 Cicer arietinum L. HOM05D006410 ORTHO05D007914 3.2e-47 193.4 164 62.8
Ca_07774_v3 Cicer arietinum L. HOM05D006410 ORTHO05D007914 3.7e-43 179.9 188 54.8
BcaB01g00971 Brassica carinata HOM05D006410 ORTHO05D007914 4.8e-43 179.5 176 58.0
CSS0050432 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 1.2e-41 174.9 166 61.4
Cpa.g.sc86.77 Carica papaya HOM05D006410 ORTHO05D007914 1.7e-40 171.0 284 42.3
CSS0030024 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 1.2e-38 164.9 155 61.3
AagrBONN_evm.TU.Sc2ySwM_344.4011 Anthoceros agrestis HOM05D006410 ORTHO05D007914 2.4e-34 150.6 209 40.2
MELO3C025226.2 Cucumis melo HOM05D006410 ORTHO05D007914 2.4e-34 150.6 163 56.4
CSS0025367 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 4.2e-31 139.8 148 54.7
RhsimUnG0084100 Rhododendron simsii HOM05D006410 ORTHO05D007914 1.6e-30 137.9 125 62.4
Os03g0334100 Oryza sativa ssp. japonica HOM05D006410 ORTHO05D007914 4.7e-30 136.3 101 66.3
RhsimUnG0080900 Rhododendron simsii HOM05D006410 ORTHO05D007914 5.2e-29 132.9 133 57.9
arahy.Tifrunner.gnm1.ann1.CPU7B3 Arachis hypogaea HOM05D006410 ORTHO05D007914 3.1e-26 123.6 186 44.1
Sed0027859 Sechium edule HOM05D006410 ORTHO05D007914 1.3e-24 118.2 104 59.6
MCO09G517 Micromonas commoda HOM05D006410 ORTHO05D007914 1.4e-21 108.2 170 32.9
CBR_g644 Chara braunii HOM05D006410 ORTHO05D007914 1.7e-16 91.3 206 28.6
Duzib151G0462 Durio zibethinus HOM05D006410 ORTHO05D007914 1.7e-16 91.3 61 73.8
CDE04G1109 Ceratophyllum demersum HOM05D040252 ORTHO05D007914 9.4e-15 85.5 55 80.0
SEGI_07330 Sequoiadendron giganteum HOM05D006410 ORTHO05D007914 2.1e-14 84.3 165 38.2
Cre17.g738200 Chlamydomonas reinhardtii HOM05D006410 ORTHO05D007914 3.5e-09 67.0 138 32.6
Lsat_1_v5_gn_8_97960 Lactuca sativa HOM05D006410 ORTHO05D007914 1.1e-07 62.0 56 60.7
CSS0000421 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 3.6e-06 57.0 117 37.6


User provided reference genes

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