Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy4G03269 Aquilegia oxysepala HOM05D007120 ORTHO05D008881 4.8e-31 137.1 66 100.0
Nn2g10275 Nelumbo nucifera HOM05D007120 ORTHO05D008881 2.3e-20 101.7 63 74.6
TAR369G0939 Trochodendron aralioides HOM05D007120 ORTHO05D008881 3.3e-19 97.8 65 70.8
MSTRG.27254 Avicennia marina HOM05D007120 ORTHO05D008881 4.7e-18 94.0 61 72.1
Cc02_g05250 Coffea canephora HOM05D007120 ORTHO05D008881 2.6e-16 88.2 58 70.7
Lj1A968T57 Lonicera japonica HOM05D007120 ORTHO05D008881 2.6e-16 88.2 62 69.4
Nn5g26831 Nelumbo nucifera HOM05D007120 ORTHO05D008881 3.4e-16 87.8 61 67.2
Os07g0680300 Oryza sativa ssp. japonica HOM05D007120 ORTHO05D008881 1.3e-15 85.9 59 71.2
Nitab4.5_0000171g0210 Nicotiana tabacum HOM05D007120 ORTHO05D008881 1.7e-15 85.5 63 61.9
Peaxi162Scf00073g02342 Petunia axillaris HOM05D007120 ORTHO05D008881 2.2e-15 85.1 63 65.1
CSS0015321 Camellia sinensis var. sinensis HOM05D007120 ORTHO05D008881 2.8e-15 84.7 50 80.0
Haze_17366 Corylus avellana HOM05D006907 ORTHO05D008598 3.7e-15 84.3 61 62.3
Migut.F00570 Erythranthe guttata HOM05D007120 ORTHO05D008881 3.7e-15 84.3 61 65.6
MBI15_g39383_MAGBIO Magnolia biondii HOM05D007120 ORTHO05D008881 3.7e-15 84.3 61 65.6
Oeu006064.1 Olea europaea HOM05D007120 ORTHO05D008881 4.9e-15 84.0 60 63.3
HanXRQChr10g0312991 Helianthus annuus HOM05D007120 ORTHO05D008881 1.4e-14 82.4 58 63.8
RcHm_v2.0_Chr1g0372461 Rosa chinensis HOM05D007120 ORTHO05D008881 1.4e-14 82.4 54 66.7
Cfa001199 Carpinus fangiana HOM05D007120 ORTHO05D008881 1.8e-14 82.0 63 63.5
MD01G1169000 Malus domestica HOM05D007120 ORTHO05D008881 1.8e-14 82.0 56 64.3
RcHm_v2.0_Chr7g0235281 Rosa chinensis HOM05D007120 ORTHO05D008881 1.8e-14 82.0 58 63.8
RcHm_v2.0_Chr7g0235311 Rosa chinensis HOM05D007120 ORTHO05D008881 1.8e-14 82.0 58 63.8
Atru.chr12.199 Acer truncatum HOM05D007120 ORTHO05D008881 2.4e-14 81.6 55 63.6
MD07G1234900 Malus domestica HOM05D007120 ORTHO05D008881 2.4e-14 81.6 56 62.5
FvH4_7g26050 Fragaria vesca HOM05D007120 ORTHO05D008881 5.4e-14 80.5 55 69.1
FAN10G2835 Fragaria x ananassa HOM05D007120 ORTHO05D008881 5.4e-14 80.5 55 69.1
HanXRQChr02g0048061 Helianthus annuus HOM05D007120 ORTHO05D008881 9.2e-14 79.7 59 61.0
PGSC0003DMG400020601 Solanum tuberosum HOM05D007120 ORTHO05D008881 9.2e-14 79.7 63 58.7
Hma1.2p1_0264F.1_g105975 Hydrangea macrophylla HOM05D007120 ORTHO05D008881 1.2e-13 79.3 61 62.3
Hma1.2p1_1805F.1_g303200 Hydrangea macrophylla HOM05D007120 ORTHO05D008881 1.2e-13 79.3 61 62.3
FAN03G2745 Fragaria x ananassa HOM05D007120 ORTHO05D008881 1.6e-13 79.0 59 66.1
Gorai.013G008400 Gossypium raimondii HOM05D007120 ORTHO05D008881 1.6e-13 79.0 61 59.0
Prupe.2G265200 Prunus persica HOM05D007120 ORTHO05D008881 1.6e-13 79.0 55 60.0
CAN.G1229.12 Capsicum annuum HOM05D007120 ORTHO05D008881 2.0e-13 78.6 63 58.7
Gohir.D06G187000 Gossypium hirsutum HOM05D007120 ORTHO05D008881 3.5e-13 77.8 58 62.1
Gorai.010G219300 Gossypium raimondii HOM05D007120 ORTHO05D008881 3.5e-13 77.8 58 62.1
FAN21G2234 Fragaria x ananassa HOM05D007120 ORTHO05D008881 4.5e-13 77.4 63 60.3
Lsat_1_v5_gn_6_11060 Lactuca sativa HOM05D007120 ORTHO05D008881 4.5e-13 77.4 59 61.0
Hund13439 Selenicereus undatus HOM05D007120 ORTHO05D008881 4.5e-13 77.4 60 65.0
Duzib128G0262 Durio zibethinus HOM05D007120 ORTHO05D008881 5.9e-13 77.0 60 55.0
MD03G1050700 Malus domestica HOM05D007120 ORTHO05D008881 5.9e-13 77.0 38 81.6
FAN11G0923 Fragaria x ananassa HOM05D007120 ORTHO05D008881 7.8e-13 76.6 63 60.3
Gohir.A06G180100 Gossypium hirsutum HOM05D007120 ORTHO05D008881 7.8e-13 76.6 58 60.3
Solyc03g095730.4 Solanum lycopersicum HOM05D007120 ORTHO05D008881 7.8e-13 76.6 59 62.7
CiPaw.14G049800 Carya illinoinensis HOM05D007120 ORTHO05D008881 1.0e-12 76.3 64 56.2
Gohir.D13G008000 Gossypium hirsutum HOM05D007120 ORTHO05D008881 1.0e-12 76.3 61 57.4
Potri.019G059500 Populus trichocarpa HOM05D007120 ORTHO05D008881 1.0e-12 76.3 61 62.3
A04p31140 Brassica napus HOM05D007120 ORTHO05D008881 2.3e-12 75.1 43 74.4
BraA04t18569Z Brassica rapa HOM05D007120 ORTHO05D008881 2.3e-12 75.1 43 74.4
Prupe.6G040200 Prunus persica HOM05D007120 ORTHO05D008881 2.3e-12 75.1 60 58.3
Manes.07G142200 Manihot esculenta HOM05D007120 ORTHO05D008881 2.9e-12 74.7 57 57.9
GSVIVG01032659001 Vitis vinifera HOM05D007120 ORTHO05D008881 2.9e-12 74.7 56 60.7
Thhalv10017507m.g Eutrema salsugineum HOM05D007120 ORTHO05D008881 3.9e-12 74.3 60 58.3
Manes.10G002800 Manihot esculenta HOM05D007120 ORTHO05D008881 5.0e-12 73.9 58 60.3
BcaB01g03516 Brassica carinata HOM05D007120 ORTHO05D008881 8.6e-12 73.2 57 59.6
A03p22930 Brassica napus HOM05D007120 ORTHO05D008881 8.6e-12 73.2 59 59.3
BolC3t15101H Brassica oleracea HOM05D007120 ORTHO05D008881 8.6e-12 73.2 59 59.3
BraA03t11516Z Brassica rapa HOM05D007120 ORTHO05D008881 8.6e-12 73.2 59 59.3
Cfa011840 Carpinus fangiana HOM05D007120 ORTHO05D008881 1.1e-11 72.8 54 61.1
Gohir.A13G007800 Gossypium hirsutum HOM05D007120 ORTHO05D008881 1.5e-11 72.4 58 55.2
Lj1g0003388 Lotus japonicus HOM05D007120 ORTHO05D008881 1.5e-11 72.4 45 66.7
Sp4g23080 Schrenkiella parvula HOM05D007120 ORTHO05D008881 1.5e-11 72.4 43 74.4
Thecc.10G184500 Theobroma cacao HOM05D007120 ORTHO05D008881 1.5e-11 72.4 56 57.1
C04p68540 Brassica napus HOM05D007120 ORTHO05D008881 1.9e-11 72.0 43 72.1
BolC4t28353H Brassica oleracea HOM05D007120 ORTHO05D008881 1.9e-11 72.0 43 72.1
BcaC02g12732 Brassica carinata HOM05D007120 ORTHO05D008881 2.5e-11 71.6 43 74.4
A05p01890 Brassica napus HOM05D007120 ORTHO05D008881 2.5e-11 71.6 43 74.4
C01p26040 Brassica napus HOM05D007120 ORTHO05D008881 3.3e-11 71.2 43 72.1
C04p02230 Brassica napus HOM05D007120 ORTHO05D008881 3.3e-11 71.2 43 72.1
BolC4t21869H Brassica oleracea HOM05D007120 ORTHO05D008881 3.3e-11 71.2 43 72.1
ATR1127G135 Amborella trichopoda HOM05D007120 ORTHO05D008881 5.6e-11 70.5 56 58.9
C04p16380 Brassica napus HOM05D007120 ORTHO05D008881 5.6e-11 70.5 42 73.8
CANSAT56G4069 Cannabis sativa HOM05D007120 ORTHO05D008881 1.2e-10 69.3 58 55.2
FAN01G0895 Fragaria x ananassa HOM05D007120 ORTHO05D008881 1.2e-10 69.3 72 52.8
DCAR_014662 Daucus carota HOM05D007120 ORTHO05D008881 1.6e-10 68.9 45 66.7
Phvul.009G043000 Phaseolus vulgaris HOM05D007120 ORTHO05D008881 2.1e-10 68.6 45 62.2
C01p18970 Brassica napus HOM05D007120 ORTHO05D008881 4.7e-10 67.4 44 72.7
Carub.0004s2306 Capsella rubella HOM05D007120 ORTHO05D008881 4.7e-10 67.4 61 52.5
CARHR135860 Cardamine hirsuta HOM05D007120 ORTHO05D008881 6.1e-10 67.0 43 67.4
Dinv34497 Davidia involucrata HOM05D006907 ORTHO05D008598 6.1e-10 67.0 45 64.4
Glyma.06G141900 Glycine max HOM05D007120 ORTHO05D008881 8.0e-10 66.6 45 57.8
Lalb_Chr11g0067731 Lupinus albus HOM05D007120 ORTHO05D008881 8.0e-10 66.6 45 62.2
Nitab4.5_0000375g0220 Nicotiana tabacum HOM05D007120 ORTHO05D008881 8.0e-10 66.6 73 49.3
Medtr3g093810 Medicago truncatula HOM05D007120 ORTHO05D008881 1.0e-09 66.2 45 60.0
AL4G38650 Arabidopsis lyrata HOM05D007120 ORTHO05D008881 1.8e-09 65.5 43 65.1
AT2G40765 Arabidopsis thaliana HOM05D007120 ORTHO05D008881 1.8e-09 65.5 43 65.1
Lalb_Chr08g0239241 Lupinus albus HOM05D007120 ORTHO05D008881 2.3e-09 65.1 45 60.0
Glyma.04G223400 Glycine max HOM05D007120 ORTHO05D008881 3.1e-09 64.7 45 57.8
Lalb_Chr23g0272151 Lupinus albus HOM05D007120 ORTHO05D008881 3.1e-09 64.7 45 60.0
Nitab4.5_0012297g0020 Nicotiana tabacum HOM05D007120 ORTHO05D008881 6.8e-09 63.5 47 63.8
FAN06G1351 Fragaria x ananassa HOM05D007120 ORTHO05D008881 8.9e-09 63.2 31 80.6
Nitab4.5_0011372g0020 Nicotiana tabacum HOM05D007120 ORTHO05D008881 2.0e-08 62.0 97 39.2
CiPaw.09G151000 Carya illinoinensis HOM05D007120 ORTHO05D008881 2.6e-08 61.6 64 50.0
DCAR_018042 Daucus carota HOM05D007120 ORTHO05D008881 3.4e-08 61.2 43 60.5
Peaxi162Scf00184g00003 Petunia axillaris HOM05D007120 ORTHO05D008881 7.5e-08 60.1 64 50.0
Sc11g0006040 Simmondsia chinensis HOM05D007120 ORTHO05D008881 2.2e-07 58.5 45 64.4
CBR_g11002 Chara braunii HOM05D007120 ORTHO05D008881 2.9e-07 58.2 57 45.6
TAR633G1173 Trochodendron aralioides HOM05D009315 ORTHO05D008839 3.7e-07 57.8 39 71.8
Hund15797 Selenicereus undatus HOM05D007120 ORTHO05D008881 1.1e-06 56.2 49 59.2
CiPaw.13G063000 Carya illinoinensis HOM05D007120 ORTHO05D008881 1.4e-06 55.8 65 52.3
Sopen07g008940 Solanum pennellii HOM05D007120 ORTHO05D008881 1.4e-06 55.8 44 61.4
AagrBONN_evm.TU.Sc2ySwM_344.712 Anthoceros agrestis HOM05D007120 ORTHO05D008881 1.9e-06 55.5 42 52.4


User provided reference genes

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