Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy4G03248 Aquilegia oxysepala HOM05D028416 ORTHO05D023592 2.6e-129 465.3 225 100.0
TAR633G0201 Trochodendron aralioides HOM05D000010 ORTHO05D000151 1.9e-34 150.2 209 43.5
MD04G1100400 Malus domestica HOM05D000010 ORTHO05D000151 3.4e-28 129.4 218 39.0
Duzib128G0932 Durio zibethinus HOM05D000010 ORTHO05D000151 1.0e-27 127.9 214 40.2
Gohir.A04G075000 Gossypium hirsutum HOM05D000010 ORTHO05D000151 8.5e-27 124.8 149 47.7
Gorai.009G418700 Gossypium raimondii HOM05D000010 ORTHO05D000151 1.4e-26 124.0 149 46.3
PSO063G3194 Papaver somniferum HOM05D000010 ORTHO05D000151 1.4e-26 124.0 172 41.3
Gohir.D04G114000 Gossypium hirsutum HOM05D000010 ORTHO05D000151 2.5e-26 123.2 149 45.6
Thecc.05G057300 Theobroma cacao HOM05D000010 ORTHO05D000151 4.2e-26 122.5 220 39.1
Dinv32765 Davidia involucrata HOM05D000010 ORTHO05D000151 9.4e-26 121.3 218 39.9
Prupe.6G238600 Prunus persica HOM05D000010 ORTHO05D000151 1.6e-25 120.6 168 42.3
Thecc.09G257900 Theobroma cacao HOM05D000010 ORTHO05D000151 2.7e-25 119.8 218 37.6
Actinidia20447 Actinidia chinensis HOM05D000010 ORTHO05D000151 4.6e-25 119.0 218 37.6
GSVIVG01025657001 Vitis vinifera HOM05D000010 ORTHO05D000151 6.1e-25 118.6 219 37.4
Ciclev10030252m.g Citrus clementina HOM05D000010 ORTHO05D000151 7.9e-25 118.2 214 40.2
QL07p044768 Quercus lobata HOM05D000010 ORTHO05D000151 8.8e-24 114.8 150 48.0
TAR636G2879 Trochodendron aralioides HOM05D000010 ORTHO05D000151 1.1e-23 114.4 182 39.0
COL.COLO4_05427 Corchorus olitorius HOM05D000010 ORTHO05D000151 7.4e-23 111.7 215 37.2
Duzib106G1913 Durio zibethinus HOM05D000010 ORTHO05D000151 9.7e-23 111.3 217 37.8
FAN14G0332 Fragaria x ananassa HOM05D000010 ORTHO05D000151 2.2e-22 110.2 222 39.2
FvH4_6g15670 Fragaria vesca HOM05D000010 ORTHO05D000151 1.4e-21 107.5 222 38.7
GSVIVG01025165001 Vitis vinifera HOM05D000010 ORTHO05D000151 1.4e-21 107.5 210 39.0
PSO339G1460 Papaver somniferum HOM05D000010 ORTHO05D000151 2.0e-20 103.6 172 38.4
Potri.006G129400 Populus trichocarpa HOM05D000010 ORTHO05D000151 2.6e-20 103.2 215 35.3
Potri.016G088300 Populus trichocarpa HOM05D000010 ORTHO05D000151 5.9e-20 102.1 213 34.3
FAN02G0510 Fragaria x ananassa HOM05D000010 ORTHO05D000151 1.0e-19 101.3 222 35.1
FAN05G0884 Fragaria x ananassa HOM05D000010 ORTHO05D000151 1.7e-19 100.5 160 42.5
FAN09G3596 Fragaria x ananassa HOM05D000010 ORTHO05D000151 5.0e-19 99.0 160 42.5
Dinv35743 Davidia involucrata HOM05D000010 ORTHO05D023592 6.5e-19 98.6 204 34.8
Duzib150G0455 Durio zibethinus HOM05D000010 ORTHO05D000151 8.5e-19 98.2 226 33.6
Hma1.2p1_0111F.1_g054120 Hydrangea macrophylla HOM05D000010 ORTHO05D000151 8.5e-19 98.2 213 31.9
Ciclev10013694m.g Citrus clementina HOM05D000010 ORTHO05D000151 1.1e-18 97.8 230 32.6
Phvul.005G136400 Phaseolus vulgaris HOM05D000010 ORTHO05D000151 1.1e-18 97.8 208 35.1
Glyma.12G171600 Glycine max HOM05D000010 ORTHO05D000151 1.9e-18 97.1 210 36.2
Actinidia07125 Actinidia chinensis HOM05D000010 ORTHO05D000151 4.2e-18 95.9 218 33.5
Glyma.13G327600 Glycine max HOM05D000010 ORTHO05D000151 7.2e-18 95.1 209 34.4
Hma1.2p1_1030F.1_g249870 Hydrangea macrophylla HOM05D000010 ORTHO05D000151 9.4e-18 94.7 217 33.2
TWI74G0443 Tripterygium wilfordii HOM05D000010 ORTHO05D000151 1.2e-17 94.4 214 33.2
Haze_20616 Corylus avellana HOM05D000010 ORTHO05D000151 6.1e-17 92.0 112 48.2
Cfa017532 Carpinus fangiana HOM05D000010 ORTHO05D000151 7.9e-17 91.7 210 36.2
Lj1g0010612 Lotus japonicus HOM05D000010 ORTHO05D000151 7.9e-17 91.7 151 39.7
TWI79G0756 Tripterygium wilfordii HOM05D000010 ORTHO05D000151 1.0e-16 91.3 150 37.3
MD11G1133000 Malus domestica HOM05D000010 ORTHO05D000151 1.8e-16 90.5 202 35.6
Manes.11G142800 Manihot esculenta HOM05D000010 ORTHO05D000151 2.3e-16 90.1 212 34.9
Cc01_g11350 Coffea canephora HOM05D000010 ORTHO05D000151 3.0e-16 89.7 174 37.9
TWI53G1604 Tripterygium wilfordii HOM05D000010 ORTHO05D000151 3.0e-16 89.7 193 35.2
Haze_23886 Corylus avellana HOM05D000010 ORTHO05D000151 5.1e-16 89.0 206 35.9
Cpa.g.c33298 Carica papaya HOM05D000010 ORTHO05D000151 6.7e-16 88.6 155 39.4
CiPaw.09G177800 Carya illinoinensis HOM05D000010 ORTHO05D000151 6.7e-16 88.6 224 32.1
Duzib168G0481 Durio zibethinus HOM05D000010 ORTHO05D000151 6.7e-16 88.6 212 32.5
arahy.Tifrunner.gnm1.ann1.JUA047 Arachis hypogaea HOM05D000010 ORTHO05D000151 8.8e-16 88.2 208 33.2
Eucgr.B02485 Eucalyptus grandis HOM05D000010 ORTHO05D000151 8.8e-16 88.2 149 36.9
Medtr7g100990 Medicago truncatula HOM05D000010 ORTHO05D000151 2.0e-15 87.0 149 36.2
Prupe.6G098600 Prunus persica HOM05D000010 ORTHO05D000151 2.0e-15 87.0 229 33.2
arahy.Tifrunner.gnm1.ann1.TCTP66 Arachis hypogaea HOM05D000010 ORTHO05D000151 2.6e-15 86.7 208 32.7
VMungo1080G0799 Vigna mungo HOM05D000010 ORTHO05D000151 2.6e-15 86.7 219 32.0
Lj2C1030T8 Lonicera japonica HOM05D000010 ORTHO05D000151 4.4e-15 85.9 208 33.7
Glyma.19G180300 Glycine max HOM05D000010 ORTHO05D000151 1.3e-14 84.3 173 37.0
Lj2A110T59 Lonicera japonica HOM05D000010 ORTHO05D000151 1.3e-14 84.3 213 31.5
Oeu005893.1 Olea europaea HOM05D000010 ORTHO05D000151 2.8e-14 83.2 219 32.9
Psat3g045040 Pisum sativum HOM05D000010 ORTHO05D000151 2.8e-14 83.2 154 38.3
FvH4_3g32720 Fragaria vesca HOM05D000010 ORTHO05D000151 4.8e-14 82.4 222 34.2
FAN11G0815 Fragaria x ananassa HOM05D000010 ORTHO05D000151 1.4e-13 80.9 222 34.2
FAN21G0584 Fragaria x ananassa HOM05D000010 ORTHO05D000151 3.1e-13 79.7 219 32.9
Manes.08G005600 Manihot esculenta HOM05D000010 ORTHO05D000151 4.1e-13 79.3 187 33.2
PGR142G0933 Punica granatum HOM05D000010 ORTHO05D000151 1.2e-12 77.8 217 30.4
CSS0019986 Camellia sinensis var. sinensis HOM05D052299 ORTHO05D043333 1.6e-12 77.4 175 33.7
FAN16G2713 Fragaria x ananassa HOM05D000010 ORTHO05D000151 1.6e-12 77.4 217 33.6
CSS0034086 Camellia sinensis var. sinensis HOM05D000010 ORTHO05D000151 3.5e-12 76.3 213 31.9
CSS0050284 Camellia sinensis var. sinensis HOM05D000010 ORTHO05D000151 3.5e-12 76.3 213 31.9
Cc01_g11320 Coffea canephora HOM05D000010 ORTHO05D000151 3.5e-12 76.3 220 30.5
ATR0681G156 Amborella trichopoda HOM05D000010 ORTHO05D000151 4.5e-12 75.9 161 32.9
Psat5g277640 Pisum sativum HOM05D000010 ORTHO05D000151 7.7e-12 75.1 189 32.3
Ca_08836_v3 Cicer arietinum L. HOM05D000010 ORTHO05D000151 1.0e-11 74.7 154 37.0
HanXRQChr13g0399701 Helianthus annuus HOM05D000010 ORTHO05D000151 1.3e-11 74.3 172 35.5
Medtr2g093810 Medicago truncatula HOM05D000010 ORTHO05D000151 1.3e-11 74.3 189 33.9
Lsat_1_v5_gn_6_30441 Lactuca sativa HOM05D000010 ORTHO05D000151 2.9e-11 73.2 111 39.6
Phvul.001G176100 Phaseolus vulgaris HOM05D000010 ORTHO05D000151 3.8e-11 72.8 173 31.8
Lj3g0023792 Lotus japonicus HOM05D000010 ORTHO05D000151 5.0e-11 72.4 209 31.1
VMungo1383G2826 Vigna mungo HOM05D000010 ORTHO05D000151 5.0e-11 72.4 156 34.6
ECA233G2370 Erigeron canadensis HOM05D000010 ORTHO05D000151 6.5e-11 72.0 159 34.6
MD03G1115100 Malus domestica HOM05D000010 ORTHO05D000151 6.5e-11 72.0 157 38.2
DCAR_006054 Daucus carota HOM05D000010 ORTHO05D000151 1.5e-10 70.9 183 30.6
Cc06_g03790 Coffea canephora HOM05D000010 ORTHO05D000151 5.5e-10 68.9 110 39.1
Ca_01425_v3 Cicer arietinum L. HOM05D000010 ORTHO05D000151 1.6e-09 67.4 208 34.1
PGR102G3255 Punica granatum HOM05D000010 ORTHO05D000151 2.1e-09 67.0 207 26.1
TPR.G18271 Trifolium pratense HOM05D028416 ORTHO05D023592 3.6e-09 66.2 135 34.8
Glyma.03G179600 Glycine max HOM05D000010 ORTHO05D000151 1.0e-08 64.7 55 54.5
CSS0044735 Camellia sinensis var. sinensis HOM05D000010 ORTHO05D000151 5.2e-08 62.4 164 31.1
HPP92_002941 Vanilla planifolia HOM05D000010 ORTHO05D000151 8.8e-08 61.6 40 70.0
Rhsim05G0183100 Rhododendron simsii HOM05D000010 ORTHO05D000151 1.1e-07 61.2 156 30.8
Sc04g0007960 Simmondsia chinensis HOM05D000010 ORTHO05D000151 1.1e-07 61.2 119 34.5
CSS0023885 Camellia sinensis var. sinensis HOM05D000010 ORTHO05D000151 1.5e-07 60.8 164 31.1
FAN25G2318 Fragaria x ananassa HOM05D000010 ORTHO05D000151 2.0e-07 60.5 247 28.3
Cpa.g.sc435.1 Carica papaya HOM05D000010 ORTHO05D000151 3.3e-07 59.7 34 76.5
Eucgr.J00940 Eucalyptus grandis HOM05D000010 ORTHO05D000151 3.3e-07 59.7 57 50.9
Lj1A188T28 Lonicera japonica HOM05D000010 ORTHO05D000151 4.4e-07 59.3 107 36.4
ECA233G4652 Erigeron canadensis HOM05D000010 ORTHO05D000151 7.5e-07 58.5 150 32.7
SalBow2G1600 Salvia bowleyana HOM05D000010 ORTHO05D000151 1.3e-06 57.8 46 56.5
arahy.Tifrunner.gnm1.ann1.JIV2H0 Arachis hypogaea HOM05D028416 ORTHO05D023592 2.8e-06 56.6 160 32.5
arahy.Tifrunner.gnm1.ann1.10FA1S Arachis hypogaea HOM05D028416 ORTHO05D023592 3.7e-06 56.2 160 31.9
CiPaw.13G109200 Carya illinoinensis HOM05D000010 ORTHO05D000151 3.7e-06 56.2 150 33.3
Oeu057658.1 Olea europaea HOM05D000010 ORTHO05D000151 3.7e-06 56.2 40 62.5
Hma1.2p1_1079F.1_g254920 Hydrangea macrophylla HOM05D000010 ORTHO05D000151 4.8e-06 55.8 36 63.9
Oeu001260.1 Olea europaea HOM05D000010 ORTHO05D000151 4.8e-06 55.8 96 38.5
HPP92_000498 Vanilla planifolia HOM05D000010 ORTHO05D000151 6.3e-06 55.5 58 48.3
Medtr4g081870 Medicago truncatula HOM05D000010 ORTHO05D000151 8.2e-06 55.1 110 33.6
Solyc05g007770.3 Solanum lycopersicum HOM05D000010 ORTHO05D000151 8.2e-06 55.1 39 64.1


User provided reference genes

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