Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy4G03229 Aquilegia oxysepala HOM05D007569 ORTHO05D009268 6.0e-45 183.7 88 100.0
Prupe.6G240500 Prunus persica HOM05D007569 ORTHO05D009268 2.2e-15 85.5 86 53.5
GSVIVG01025645001 Vitis vinifera HOM05D007569 ORTHO05D009268 4.2e-14 81.3 87 50.6
Nn2g10705 Nelumbo nucifera HOM05D007569 ORTHO05D009268 4.6e-13 77.8 87 49.4
TAR623G1008 Trochodendron aralioides HOM05D007569 ORTHO05D009268 4.6e-13 77.8 87 52.9
Migut.L01668 Erythranthe guttata HOM05D007569 ORTHO05D009268 1.4e-12 76.3 87 46.0
Nn2g13029 Nelumbo nucifera HOM05D007569 ORTHO05D009268 1.4e-12 76.3 88 43.2
Cc06_g03690 Coffea canephora HOM05D007569 ORTHO05D009268 3.9e-12 74.7 81 50.6
Dinv35729 Davidia involucrata HOM05D007569 ORTHO05D009268 1.5e-11 72.8 86 46.5
CiPaw.09G178900 Carya illinoinensis HOM05D007569 ORTHO05D009268 2.0e-11 72.4 86 50.0
Actinidia19698 Actinidia chinensis HOM05D007569 ORTHO05D009268 2.5e-11 72.0 87 49.4
CSS0032625 Camellia sinensis var. sinensis HOM05D007569 ORTHO05D009268 4.3e-11 71.2 88 46.6
MD04G1102400 Malus domestica HOM05D007569 ORTHO05D009268 5.7e-11 70.9 88 43.2
Sabra16G0093200 Salix brachista HOM05D007569 ORTHO05D009268 9.7e-11 70.1 83 49.4
Potri.016G087000 Populus trichocarpa HOM05D007569 ORTHO05D009268 2.2e-10 68.9 88 50.0
Haze_20627 Corylus avellana HOM05D007569 ORTHO05D009268 2.8e-10 68.6 82 47.6
QL07p045078 Quercus lobata HOM05D007569 ORTHO05D009268 3.7e-10 68.2 86 46.5
Peaxi162Scf00005g00394 Petunia axillaris HOM05D007569 ORTHO05D009268 6.3e-10 67.4 86 43.0
Oeu026850.1 Olea europaea HOM05D007569 ORTHO05D009268 8.2e-10 67.0 86 45.3
Medtr7g100860 Medicago truncatula HOM05D007569 ORTHO05D009268 1.8e-09 65.9 74 50.0
Potri.006G130400 Populus trichocarpa HOM05D007569 ORTHO05D009268 3.1e-09 65.1 88 45.5
CANSAT80G1933 Cannabis sativa HOM05D007569 ORTHO05D009268 4.1e-09 64.7 72 44.4
CiPaw.10G136400 Carya illinoinensis HOM05D007569 ORTHO05D009268 5.3e-09 64.3 88 50.0
CiPaw.10G136600 Carya illinoinensis HOM05D007569 ORTHO05D009268 6.9e-09 63.9 88 50.0
Ciclev10013224m.g Citrus clementina HOM05D007569 ORTHO05D009268 6.9e-09 63.9 88 47.7
Actinidia05265 Actinidia chinensis HOM05D007569 ORTHO05D009268 1.5e-08 62.8 78 38.5
Sabra06G0102400 Salix brachista HOM05D007569 ORTHO05D009268 1.5e-08 62.8 84 45.2
COL.COLO4_27060 Corchorus olitorius HOM05D007569 ORTHO05D009268 2.0e-08 62.4 71 50.7
EL10Ac7g16512 Beta vulgaris HOM05D007569 ORTHO05D009268 2.6e-08 62.0 72 44.4
Peaxi162Scf00472g00312 Petunia axillaris HOM05D007569 ORTHO05D009268 3.4e-08 61.6 87 37.9
Lalb_Chr01g0018971 Lupinus albus HOM05D007569 ORTHO05D009268 4.5e-08 61.2 82 45.1
Nitab4.5_0003871g0030 Nicotiana tabacum HOM05D007569 ORTHO05D009268 4.5e-08 61.2 85 40.0
Nitab4.5_0008568g0070 Nicotiana tabacum HOM05D007569 ORTHO05D009268 4.5e-08 61.2 85 38.8
RcHm_v2.0_Chr3g0469031 Rosa chinensis HOM05D007569 ORTHO05D009268 4.5e-08 61.2 87 42.5
PGSC0003DMG400001743 Solanum tuberosum HOM05D007569 ORTHO05D009268 4.5e-08 61.2 76 40.8
Cpa.g.sc368.3 Carica papaya HOM05D007569 ORTHO05D009268 5.9e-08 60.8 71 46.5
Lalb_Chr25g0289201 Lupinus albus HOM05D007569 ORTHO05D009268 5.9e-08 60.8 68 52.9
Lj5g0021553 Lotus japonicus HOM05D007569 ORTHO05D009268 1.3e-07 59.7 87 43.7
Thecc.05G055900 Theobroma cacao HOM05D007569 ORTHO05D009268 2.2e-07 58.9 81 43.2
Nitab4.5_0000669g0110 Nicotiana tabacum HOM05D007569 ORTHO05D009268 2.9e-07 58.5 87 37.9
Lsat_1_v5_gn_6_30260 Lactuca sativa HOM05D007569 ORTHO05D009268 5.0e-07 57.8 81 40.7
MBI14_g40503_MAGBIO Magnolia biondii HOM05D007569 ORTHO05D009268 6.5e-07 57.4 58 50.0
Atru.chr8.1895 Acer truncatum HOM05D004499 ORTHO05D004928 8.5e-07 57.0 38 55.3
Nitab4.5_0006156g0030 Nicotiana tabacum HOM05D007569 ORTHO05D009268 8.5e-07 57.0 88 38.6
AT5G03120 Arabidopsis thaliana HOM05D007569 ORTHO05D009268 1.1e-06 56.6 72 37.5
Gohir.A01G216400 Gossypium hirsutum HOM05D007569 ORTHO05D009268 1.1e-06 56.6 83 39.8
Manes.08G004500 Manihot esculenta HOM05D007569 ORTHO05D009268 1.1e-06 56.6 75 42.7
Sp6g39590 Schrenkiella parvula HOM05D007569 ORTHO05D009268 1.1e-06 56.6 72 44.4
Psat3g044160 Pisum sativum HOM05D007569 ORTHO05D009268 1.4e-06 56.2 56 57.1
RhsimUnG0115600 Rhododendron simsii HOM05D007569 ORTHO05D009268 1.4e-06 56.2 81 40.7
Sc07g0006270 Simmondsia chinensis HOM05D007569 ORTHO05D009268 1.4e-06 56.2 69 42.0
Solyc10g150149.1 Solanum lycopersicum HOM05D007569 ORTHO05D009268 2.5e-06 55.5 44 52.3
Gorai.002G249500 Gossypium raimondii HOM05D007569 ORTHO05D009268 3.2e-06 55.1 83 38.6
BcaB01g05860 Brassica carinata HOM05D007569 ORTHO05D009268 4.2e-06 54.7 63 46.0
A03p01020 Brassica napus HOM05D007569 ORTHO05D009268 4.2e-06 54.7 66 43.9
C03p01310 Brassica napus HOM05D007569 ORTHO05D009268 4.2e-06 54.7 63 46.0
BolC3t12690H Brassica oleracea HOM05D007569 ORTHO05D009268 4.2e-06 54.7 63 46.0
BraA03t09483Z Brassica rapa HOM05D007569 ORTHO05D009268 4.2e-06 54.7 66 43.9
Carub.0006s0192 Capsella rubella HOM05D007569 ORTHO05D009268 4.2e-06 54.7 72 36.1
Glyma.10G050600 Glycine max HOM05D007569 ORTHO05D009268 4.2e-06 54.7 82 42.7
FvH4_6g15530 Fragaria vesca HOM05D007569 ORTHO05D009268 7.2e-06 53.9 82 40.2
FAN14G4266 Fragaria x ananassa HOM05D007569 ORTHO05D009268 7.2e-06 53.9 82 40.2
FAN05G3967 Fragaria x ananassa HOM05D007569 ORTHO05D009268 9.4e-06 53.5 63 47.6


User provided reference genes

Program Settings