Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy4G03219 Aquilegia oxysepala HOM05D006058 ORTHO05D007686 6.1e-76 287.3 138 100.0
Nn4g26080 Nelumbo nucifera HOM05D006058 ORTHO05D007686 1.8e-59 232.6 138 77.5
CSS0022820 Camellia sinensis var. sinensis HOM05D006058 ORTHO05D007686 1.1e-58 229.9 135 80.7
Oeu032852.1 Olea europaea HOM05D006058 ORTHO05D007686 3.3e-58 228.4 132 81.1
SGA_v2.0_scaffold130G34295 Striga asiatica HOM05D006058 ORTHO05D007686 3.3e-58 228.4 133 80.5
PSO407G0089 Papaver somniferum HOM05D006058 ORTHO05D007686 9.7e-58 226.9 138 79.0
PSO170G2912 Papaver somniferum HOM05D006058 ORTHO05D007686 2.8e-57 225.3 138 77.5
MBI07_g41269_MAGBIO Magnolia biondii HOM05D006058 ORTHO05D007686 4.8e-57 224.6 138 77.5
vmacro02518 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 8.2e-57 223.8 135 79.3
FAN27G3183 Fragaria x ananassa HOM05D006058 ORTHO05D007686 1.4e-56 223.0 136 77.2
TAR636G0052 Trochodendron aralioides HOM05D006058 ORTHO05D007686 3.1e-56 221.9 138 79.0
Manes.07G087200 Manihot esculenta HOM05D006058 ORTHO05D007686 4.1e-56 221.5 135 77.0
DCAR_018372 Daucus carota HOM05D006058 ORTHO05D007686 9.1e-56 220.3 136 77.9
Peaxi162Scf00273g00034 Petunia axillaris HOM05D006058 ORTHO05D007686 1.2e-55 219.9 135 74.8
Eucgr.H01614 Eucalyptus grandis HOM05D006058 ORTHO05D007686 1.5e-55 219.5 135 74.8
FvH4_2g24470 Fragaria vesca HOM05D006058 ORTHO05D007686 1.5e-55 219.5 135 77.0
FAN24G0575 Fragaria x ananassa HOM05D006058 ORTHO05D007686 1.5e-55 219.5 135 77.0
Hma1.2p1_1049F.1_g251900 Hydrangea macrophylla HOM05D006058 ORTHO05D007686 1.5e-55 219.5 135 76.3
RcHm_v2.0_Chr6g0292311 Rosa chinensis HOM05D006058 ORTHO05D007686 1.5e-55 219.5 135 76.3
Lj2g0026207 Lotus japonicus HOM05D006058 ORTHO05D007686 3.5e-55 218.4 138 72.5
MD04G1200100 Malus domestica HOM05D006058 ORTHO05D007686 4.5e-55 218.0 141 75.2
Hma1.2p1_0399F.1_g144340 Hydrangea macrophylla HOM05D006058 ORTHO05D007686 5.9e-55 217.6 135 76.3
Prupe.8G268000 Prunus persica HOM05D006058 ORTHO05D007686 5.9e-55 217.6 138 75.4
Duzib211G0114 Durio zibethinus HOM05D006058 ORTHO05D007686 1.0e-54 216.9 138 73.2
Psat4g228760 Pisum sativum HOM05D006058 ORTHO05D007686 1.0e-54 216.9 135 73.3
Nitab4.5_0001499g0140 Nicotiana tabacum HOM05D006058 ORTHO05D007686 1.7e-54 216.1 135 74.1
Sc26g0003460 Simmondsia chinensis HOM05D006058 ORTHO05D007686 2.9e-54 215.3 135 74.1
Nitab4.5_0009592g0010 Nicotiana tabacum HOM05D006058 ORTHO05D007686 3.8e-54 214.9 135 72.6
AUR62036672 Chenopodium quinoa HOM05D006058 ORTHO05D007686 5.0e-54 214.5 135 73.3
Thecc.01G288100 Theobroma cacao HOM05D006058 ORTHO05D007686 6.5e-54 214.2 138 71.7
Ca_03230_v3 Cicer arietinum L. HOM05D006058 ORTHO05D007686 1.1e-53 213.4 135 74.8
CDE02G3716 Ceratophyllum demersum HOM05D006058 ORTHO05D007686 1.5e-53 213.0 135 71.9
GSVIVG01011025001 Vitis vinifera HOM05D006058 ORTHO05D007686 1.5e-53 213.0 138 71.7
Nitab4.5_0004672g0030 Nicotiana tabacum HOM05D006058 ORTHO05D007686 1.9e-53 212.6 135 73.3
vmacro04594 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 2.5e-53 212.2 131 77.1
MD12G1212600 Malus domestica HOM05D006058 ORTHO05D007686 5.5e-53 211.1 141 73.0
Peaxi162Scf00026g00313 Petunia axillaris HOM05D006058 ORTHO05D007686 9.4e-53 210.3 135 74.1
PGR119G2453 Punica granatum HOM05D006058 ORTHO05D007686 9.4e-53 210.3 136 72.8
Gohir.A12G007700 Gossypium hirsutum HOM05D006058 ORTHO05D007686 1.2e-52 209.9 138 71.7
TWI23G1093 Tripterygium wilfordii HOM05D006058 ORTHO05D007686 1.2e-52 209.9 136 73.5
Lalb_Chr07g0187491 Lupinus albus HOM05D006058 ORTHO05D007686 1.6e-52 209.5 138 72.5
Ah.10g033440 Amaranthus hybridus HOM05D006058 ORTHO05D007686 2.7e-52 208.8 135 71.1
CANSAT25G3509 Cannabis sativa HOM05D006058 ORTHO05D007686 2.7e-52 208.8 134 73.1
TPR.G16722 Trifolium pratense HOM05D006058 ORTHO05D007686 2.7e-52 208.8 135 70.4
Glyma.01G089000 Glycine max HOM05D006058 ORTHO05D007686 6.1e-52 207.6 135 69.6
Glyma.04G146600 Glycine max HOM05D006058 ORTHO05D007686 6.1e-52 207.6 135 69.6
Lju470C11T9 Lonicera japonica HOM05D006058 ORTHO05D007686 8.0e-52 207.2 138 73.9
TPR.G8807 Trifolium pratense HOM05D006058 ORTHO05D007686 2.3e-51 205.7 135 68.1
Gohir.D12G007100 Gossypium hirsutum HOM05D006058 ORTHO05D007686 3.0e-51 205.3 138 69.6
Hund02088 Selenicereus undatus HOM05D006058 ORTHO05D007686 3.0e-51 205.3 135 70.4
Rhsim13G0018500 Rhododendron simsii HOM05D003625 ORTHO05D004382 3.9e-51 204.9 119 80.7
unitig_0.g1187 Utricularia gibba HOM05D006058 ORTHO05D007686 8.8e-51 203.8 132 68.9
CiPaw.07G098200 Carya illinoinensis HOM05D006058 ORTHO05D007686 1.1e-50 203.4 138 71.7
Potri.014G083500 Populus trichocarpa HOM05D006058 ORTHO05D007686 1.1e-50 203.4 139 69.1
Medtr3g010210 Medicago truncatula HOM05D006058 ORTHO05D007686 1.5e-50 203.0 135 68.9
Gorai.008G007300 Gossypium raimondii HOM05D006058 ORTHO05D007686 2.0e-50 202.6 135 68.9
MELO3C015303.2 Cucumis melo HOM05D006058 ORTHO05D007686 2.6e-50 202.2 136 72.1
CsaV3_1G038790 Cucumis sativus L. HOM05D006058 ORTHO05D007686 2.6e-50 202.2 136 72.1
QL12p042454 Quercus lobata HOM05D006058 ORTHO05D007686 2.6e-50 202.2 137 72.3
Cfa006057 Carpinus fangiana HOM05D006058 ORTHO05D007686 3.3e-50 201.8 138 72.5
Atru.chr5.1299 Acer truncatum HOM05D006058 ORTHO05D007686 4.4e-50 201.4 137 71.5
Sabra02G0198900 Salix brachista HOM05D006058 ORTHO05D007686 4.4e-50 201.4 139 71.2
Ciclev10022776m.g Citrus clementina HOM05D006058 ORTHO05D007686 9.7e-50 200.3 140 69.3
COL.COLO4_08051 Corchorus olitorius HOM05D006058 ORTHO05D007686 1.3e-49 199.9 138 70.3
HanXRQChr03g0093951 Helianthus annuus HOM05D006058 ORTHO05D007686 1.7e-49 199.5 137 69.3
HanXRQChr15g0476421 Helianthus annuus HOM05D006058 ORTHO05D007686 1.7e-49 199.5 138 70.3
Cc01_g20070 Coffea canephora HOM05D006058 ORTHO05D007686 2.2e-49 199.1 141 69.5
TPR.G22635 Trifolium pratense HOM05D006058 ORTHO05D007686 2.8e-49 198.7 135 68.1
Actinidia00707 Actinidia chinensis HOM05D006058 ORTHO05D007686 3.7e-49 198.4 119 78.2
SalBow3G0902 Salvia bowleyana HOM05D006058 ORTHO05D007686 3.7e-49 198.4 132 68.9
BraA06t25979Z Brassica rapa HOM05D006058 ORTHO05D007686 4.8e-49 198.0 138 68.1
Prupe.3G123100 Prunus persica HOM05D006058 ORTHO05D007686 1.1e-48 196.8 138 71.0
A06p30300 Brassica napus HOM05D006058 ORTHO05D007686 1.4e-48 196.4 138 67.4
SEGI_21939 Sequoiadendron giganteum HOM05D006058 ORTHO05D007686 1.4e-48 196.4 139 64.7
Thhalv10005102m.g Eutrema salsugineum HOM05D006058 ORTHO05D007686 1.8e-48 196.1 138 69.6
Phvul.002G050500 Phaseolus vulgaris HOM05D006058 ORTHO05D007686 2.4e-48 195.7 138 66.7
AL8G40840 Arabidopsis lyrata HOM05D006058 ORTHO05D007686 7.0e-48 194.1 138 67.4
BcaC01g02630 Brassica carinata HOM05D006058 ORTHO05D007686 1.6e-47 193.0 138 65.9
C03p62750 Brassica napus HOM05D006058 ORTHO05D007686 1.6e-47 193.0 138 65.9
Carub.0008s2446 Capsella rubella HOM05D006058 ORTHO05D007686 1.6e-47 193.0 139 65.5
BcaC03g18221 Brassica carinata HOM05D006058 ORTHO05D007686 2.6e-47 192.2 140 67.1
Sp2g26790 Schrenkiella parvula HOM05D006058 ORTHO05D007686 2.6e-47 192.2 140 67.1
HPP92_016068 Vanilla planifolia HOM05D006058 ORTHO05D007686 2.6e-47 192.2 135 66.7
AT5G63690 Arabidopsis thaliana HOM05D006058 ORTHO05D007686 3.5e-47 191.8 138 65.9
BolC3t18529H Brassica oleracea HOM05D006058 ORTHO05D007686 4.5e-47 191.4 138 65.2
BcaB02g09737 Brassica carinata HOM05D006058 ORTHO05D007686 5.9e-47 191.0 140 66.4
BolC2t12363H Brassica oleracea HOM05D006058 ORTHO05D007686 5.9e-47 191.0 140 67.1
Hund29081 Selenicereus undatus HOM05D006058 ORTHO05D007686 5.9e-47 191.0 127 69.3
Hund29083 Selenicereus undatus HOM05D006058 ORTHO05D007686 5.9e-47 191.0 127 69.3
Zm00001eb106990 Zea mays HOM05D006058 ORTHO05D007686 5.9e-47 191.0 139 66.2
CARHR277600 Cardamine hirsuta HOM05D006058 ORTHO05D007686 1.3e-46 189.9 135 67.4
Prupe.8G250400 Prunus persica HOM05D006058 ORTHO05D007686 2.2e-46 189.1 108 78.7
THA.LOC104826323 Tarenaya hassleriana HOM05D006058 ORTHO05D007686 2.9e-46 188.7 135 67.4
Aa31LG10G11090 Aethionema arabicum HOM05D006058 ORTHO05D007686 3.8e-46 188.3 137 66.4
BcaB07g29701 Brassica carinata HOM05D006058 ORTHO05D007686 3.8e-46 188.3 140 66.4
Nn3g21231 Nelumbo nucifera HOM05D006058 ORTHO05D007686 1.5e-45 186.4 116 75.0
C02p62900 Brassica napus HOM05D006058 ORTHO05D007686 1.9e-45 186.0 139 66.2
A02p42950 Brassica napus HOM05D006058 ORTHO05D007686 3.2e-45 185.3 140 65.0
Solyc12g014020.2 Solanum lycopersicum HOM05D006058 ORTHO05D007686 7.2e-45 184.1 121 73.6
Sopen12g005770 Solanum pennellii HOM05D006058 ORTHO05D007686 7.2e-45 184.1 121 73.6
Migut.D00240 Erythranthe guttata HOM05D006058 ORTHO05D007686 1.2e-44 183.3 138 64.5
SHI14488 Sapria himalayana HOM05D006058 ORTHO05D007686 2.1e-44 182.6 139 64.0
EL10Ac7g17168 Beta vulgaris HOM05D006058 ORTHO05D007686 2.7e-44 182.2 135 63.0
PGSC0003DMG400015370 Solanum tuberosum HOM05D006058 ORTHO05D007686 3.6e-44 181.8 121 72.7
arahy.Tifrunner.gnm1.ann1.SHER6S Arachis hypogaea HOM05D006058 ORTHO05D007686 4.7e-44 181.4 120 70.0
arahy.Tifrunner.gnm1.ann1.Y2QWLJ Arachis hypogaea HOM05D006058 ORTHO05D007686 1.0e-43 180.3 120 70.0
BraA02t09218Z Brassica rapa HOM05D006058 ORTHO05D007686 2.0e-42 176.0 134 64.2
Manes.10G061700 Manihot esculenta HOM05D006058 ORTHO05D007686 4.8e-41 171.4 128 65.6
ClCG03G017360 Citrullus lanatus HOM05D006058 ORTHO05D007686 6.3e-41 171.0 107 75.7
VMungo1215G3318 Vigna mungo HOM05D006058 ORTHO05D007686 5.4e-40 167.9 125 64.8
Sed0020474 Sechium edule HOM05D006058 ORTHO05D007686 1.2e-39 166.8 107 73.8
ECA240G0292 Erigeron canadensis HOM05D006058 ORTHO05D007686 4.5e-39 164.9 125 65.6
Eucgr.H01617 Eucalyptus grandis HOM05D006058 ORTHO05D007686 1.0e-38 163.7 135 60.0
CAN.G964.10 Capsicum annuum HOM05D006058 ORTHO05D007686 6.5e-38 161.0 128 62.5
ATR0225G019 Amborella trichopoda HOM05D006058 ORTHO05D007686 1.4e-35 153.3 109 66.1
Mapoly0122s0023 Marchantia polymorpha HOM05D006058 ORTHO05D007686 3.4e-34 148.7 122 55.7
CBR_g26410 Chara braunii HOM05D006058 ORTHO05D007686 7.5e-34 147.5 123 55.3
SMO244G0033 Selaginella moellendorffii HOM05D006058 ORTHO05D007686 1.3e-33 146.7 129 54.3
AUR62034597 Chenopodium quinoa HOM05D006058 ORTHO05D007686 1.7e-33 146.4 95 73.7
AagrBONN_evm.TU.Sc2ySwM_369.269 Anthoceros agrestis HOM05D006058 ORTHO05D007686 2.2e-33 146.0 125 52.0
Mapoly0068s0046 Marchantia polymorpha HOM05D006058 ORTHO05D007686 8.3e-33 144.1 116 56.0
EL10Ac3g06921 Beta vulgaris HOM05D006058 ORTHO05D007686 1.1e-32 143.7 130 56.2
TAR365G0318 Trochodendron aralioides HOM05D006058 ORTHO05D007686 1.8e-32 142.9 114 61.4
BolC4t22707H Brassica oleracea HOM05D006058 ORTHO05D007686 2.7e-31 139.0 94 68.1
Pp3c3_34830 Physcomitrium patens HOM05D006058 ORTHO05D007686 1.3e-30 136.7 117 53.8
Aa31LG1G18150 Aethionema arabicum HOM05D000706 ORTHO05D001554 4.0e-27 125.2 84 69.0
Sc05g0004330 Simmondsia chinensis HOM05D006058 ORTHO05D007686 6.8e-27 124.4 86 66.3
MBI07_g41268_MAGBIO Magnolia biondii HOM05D002731 ORTHO05D003073 1.2e-26 123.6 90 64.4
CBR_g24266 Chara braunii HOM05D006058 ORTHO05D007686 3.4e-26 122.1 127 44.9
vmacro09159 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 1.3e-14 83.6 53 71.7
QL12p023442 Quercus lobata HOM05D006058 ORTHO05D007686 8.6e-14 80.9 87 51.7
CAN.G27.69 Capsicum annuum HOM05D005779 ORTHO05D007040 1.0e-06 57.4 42 61.9


User provided reference genes

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