Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy4G03156 Aquilegia oxysepala HOM05D004659 ORTHO05D005547 1.7e-115 419.5 226 100.0
TAR369G1054 Trochodendron aralioides HOM05D004659 ORTHO05D005547 2.2e-83 312.8 227 78.4
PSO384G3929 Papaver somniferum HOM05D004659 ORTHO05D005547 1.4e-82 310.1 226 76.5
PSO339G6228 Papaver somniferum HOM05D004659 ORTHO05D005547 1.6e-81 306.6 226 76.1
Nn2g10610 Nelumbo nucifera HOM05D004659 ORTHO05D005547 7.8e-81 304.3 227 75.8
Nn8g38769 Nelumbo nucifera HOM05D004659 ORTHO05D005547 1.5e-79 300.1 227 75.3
Rhsim03G0135900 Rhododendron simsii HOM05D004659 ORTHO05D005547 2.1e-78 296.2 233 68.2
CsaV3_5G006380 Cucumis sativus L. HOM05D004659 ORTHO05D005547 3.6e-78 295.4 232 70.3
ClCG02G013790 Citrullus lanatus HOM05D004659 ORTHO05D005547 8.1e-78 294.3 231 69.3
MD10G1183400 Malus domestica HOM05D004659 ORTHO05D005547 8.1e-78 294.3 233 70.0
Nitab4.5_0004104g0080 Nicotiana tabacum HOM05D004659 ORTHO05D005547 1.4e-77 293.5 229 68.1
MELO3C011720.2 Cucumis melo HOM05D004659 ORTHO05D005547 2.4e-77 292.7 230 70.0
Peaxi162Scf00195g00083 Petunia axillaris HOM05D004659 ORTHO05D005547 2.4e-77 292.7 224 67.9
Lj1P926T21 Lonicera japonica HOM05D004659 ORTHO05D005547 5.3e-77 291.6 231 65.4
PGSC0003DMG400032570 Solanum tuberosum HOM05D004659 ORTHO05D005547 1.2e-76 290.4 227 66.5
Prupe.8G222500 Prunus persica HOM05D004659 ORTHO05D005547 1.5e-76 290.0 235 68.9
CiPaw.02G177400 Carya illinoinensis HOM05D004659 ORTHO05D005547 2.0e-76 289.7 231 66.2
Nitab4.5_0000691g0220 Nicotiana tabacum HOM05D004659 ORTHO05D005547 2.6e-76 289.3 229 67.7
Gohir.A05G298900 Gossypium hirsutum HOM05D004659 ORTHO05D005547 4.4e-76 288.5 232 67.7
MBI05_g34749_MAGBIO Magnolia biondii HOM05D004659 ORTHO05D005547 4.4e-76 288.5 230 69.1
CSS0038055 Camellia sinensis var. sinensis HOM05D004659 ORTHO05D005547 7.6e-76 287.7 235 65.5
Solyc04g009540.1 Solanum lycopersicum HOM05D004659 ORTHO05D005547 7.6e-76 287.7 227 66.5
Sopen04g004700 Solanum pennellii HOM05D004659 ORTHO05D005547 7.6e-76 287.7 227 66.5
Gorai.009G315800 Gossypium raimondii HOM05D004659 ORTHO05D005547 9.9e-76 287.3 232 67.7
CAN.G186.30 Capsicum annuum HOM05D004659 ORTHO05D005547 1.7e-75 286.6 227 66.1
CDE09G1094 Ceratophyllum demersum HOM05D004659 ORTHO05D005547 1.7e-75 286.6 224 71.4
Medtr4g131540 Medicago truncatula HOM05D004659 ORTHO05D005547 2.2e-75 286.2 226 64.2
arahy.Tifrunner.gnm1.ann1.23T474 Arachis hypogaea HOM05D004659 ORTHO05D005547 3.8e-75 285.4 182 75.8
Gohir.D05G298600 Gossypium hirsutum HOM05D004659 ORTHO05D005547 3.8e-75 285.4 232 67.2
MD05G1196100 Malus domestica HOM05D004659 ORTHO05D005547 3.8e-75 285.4 237 67.1
Hma1.2p1_2685F.1_g326920 Hydrangea macrophylla HOM05D004659 ORTHO05D005547 4.9e-75 285.0 238 65.5
TWI38G0010 Tripterygium wilfordii HOM05D004659 ORTHO05D005547 8.4e-75 284.3 226 69.9
Potri.010G215900 Populus trichocarpa HOM05D004659 ORTHO05D005547 1.1e-74 283.9 226 67.7
PGR031G1734 Punica granatum HOM05D004659 ORTHO05D005547 1.1e-74 283.9 234 65.4
Sabra10G0166900 Salix brachista HOM05D004659 ORTHO05D005547 1.1e-74 283.9 197 72.6
Manes.07G069200 Manihot esculenta HOM05D004659 ORTHO05D005547 3.2e-74 282.3 229 66.8
Ca_21106_v3 Cicer arietinum L. HOM05D004659 ORTHO05D005547 4.2e-74 282.0 228 64.0
Atru.chr12.612 Acer truncatum HOM05D004659 ORTHO05D005547 7.1e-74 281.2 228 65.4
Cfa013817 Carpinus fangiana HOM05D004659 ORTHO05D005547 7.1e-74 281.2 231 69.7
unitig_46.g18586 Utricularia gibba HOM05D004659 ORTHO05D005547 9.3e-74 280.8 240 66.7
COL.COLO4_23776 Corchorus olitorius HOM05D004659 ORTHO05D005547 1.2e-73 280.4 230 71.3
Haze_22491 Corylus avellana HOM05D004659 ORTHO05D005547 1.2e-73 280.4 224 69.6
VMungo0464G0639 Vigna mungo HOM05D004659 ORTHO05D005547 1.2e-73 280.4 200 68.0
Cpa.g.sc1.279 Carica papaya HOM05D004659 ORTHO05D005547 4.6e-73 278.5 226 66.8
Sp6g30510 Schrenkiella parvula HOM05D004659 ORTHO05D005547 4.6e-73 278.5 222 68.9
THA.LOC104827313 Tarenaya hassleriana HOM05D004659 ORTHO05D005547 6.0e-73 278.1 225 65.3
vmacro04881 Vaccinium macrocarpon HOM05D004659 ORTHO05D005547 6.0e-73 278.1 239 63.6
BraA02t05172Z Brassica rapa HOM05D004659 ORTHO05D005547 7.9e-73 277.7 222 68.9
Thhalv10014625m.g Eutrema salsugineum HOM05D004659 ORTHO05D005547 1.0e-72 277.3 222 69.4
Sc09g0006840 Simmondsia chinensis HOM05D004659 ORTHO05D005547 1.0e-72 277.3 235 66.4
C02p06210 Brassica napus HOM05D004659 ORTHO05D005547 2.3e-72 276.2 222 68.0
A10p24760 Brassica napus HOM05D004659 ORTHO05D005547 3.0e-72 275.8 221 70.6
C09p63590 Brassica napus HOM05D004659 ORTHO05D005547 3.0e-72 275.8 221 70.6
BraA10t44539Z Brassica rapa HOM05D004659 ORTHO05D005547 3.0e-72 275.8 221 70.6
CARHR199930 Cardamine hirsuta HOM05D004659 ORTHO05D005547 3.0e-72 275.8 222 64.4
Phvul.004G002100 Phaseolus vulgaris HOM05D004659 ORTHO05D005547 3.0e-72 275.8 200 67.0
Sabra08G0032100 Salix brachista HOM05D004659 ORTHO05D005547 3.0e-72 275.8 228 64.5
BcaC04g19111 Brassica carinata HOM05D004659 ORTHO05D005547 3.9e-72 275.4 221 68.3
BolC9t59202H Brassica oleracea HOM05D004659 ORTHO05D005547 3.9e-72 275.4 221 68.3
Psat4g007600 Pisum sativum HOM05D004659 ORTHO05D005547 3.9e-72 275.4 234 62.4
BolC2t06562H Brassica oleracea HOM05D004659 ORTHO05D005547 5.1e-72 275.0 222 68.5
Sed0009994 Sechium edule HOM05D004659 ORTHO05D005547 6.6e-72 274.6 225 65.3
CDE02G4355 Ceratophyllum demersum HOM05D002697 ORTHO05D005547 8.7e-72 274.2 181 79.6
Potri.008G045800 Populus trichocarpa HOM05D004659 ORTHO05D005547 8.7e-72 274.2 231 64.5
MSTRG.9197 Avicennia marina HOM05D004659 ORTHO05D005547 1.1e-71 273.9 234 64.5
SalBow4G3080 Salvia bowleyana HOM05D004659 ORTHO05D005547 1.1e-71 273.9 232 62.5
BcaNung01147 Brassica carinata HOM05D004659 ORTHO05D005547 1.5e-71 273.5 222 68.0
BcaNung01889 Brassica carinata HOM05D004659 ORTHO05D005547 1.9e-71 273.1 222 68.9
Ciclev10032705m.g Citrus clementina HOM05D004659 ORTHO05D005547 2.5e-71 272.7 227 69.2
CANSAT35G1484 Cannabis sativa HOM05D004659 ORTHO05D005547 4.3e-71 271.9 227 65.6
AL6G24130 Arabidopsis lyrata HOM05D004659 ORTHO05D005547 5.6e-71 271.6 222 63.1
Thecc.10G065300 Theobroma cacao HOM05D004659 ORTHO05D005547 5.6e-71 271.6 232 69.4
Aa31sc127G30 Aethionema arabicum HOM05D004659 ORTHO05D005547 7.3e-71 271.2 225 62.7
Ah.10g033100 Amaranthus hybridus HOM05D004659 ORTHO05D005547 9.6e-71 270.8 224 66.1
Lsat_1_v5_gn_9_66541 Lactuca sativa HOM05D004659 ORTHO05D005547 9.6e-71 270.8 232 65.5
ATR0594G228 Amborella trichopoda HOM05D004659 ORTHO05D005547 1.3e-70 270.4 195 72.8
Carub.0006s1167 Capsella rubella HOM05D004659 ORTHO05D005547 1.3e-70 270.4 222 68.5
Oeu017240.1 Olea europaea HOM05D004659 ORTHO05D005547 1.6e-70 270.0 233 63.5
AUR62027894 Chenopodium quinoa HOM05D004659 ORTHO05D005547 2.8e-70 269.2 228 62.7
AT5G13510 Arabidopsis thaliana HOM05D004659 ORTHO05D005547 3.6e-70 268.9 222 62.2
Lalb_Chr07g0179691 Lupinus albus HOM05D004659 ORTHO05D005547 3.6e-70 268.9 211 70.1
THA.LOC104799364 Tarenaya hassleriana HOM05D004659 ORTHO05D005547 4.8e-70 268.5 222 63.1
Glyma.17G075900 Glycine max HOM05D004659 ORTHO05D005547 8.1e-70 267.7 229 65.1
RcHm_v2.0_Chr6g0287931 Rosa chinensis HOM05D004659 ORTHO05D005547 1.4e-69 266.9 223 67.7
QL08p057255 Quercus lobata HOM05D004659 ORTHO05D005547 1.8e-69 266.5 225 67.1
DCAR_019149 Daucus carota HOM05D004659 ORTHO05D005547 3.1e-69 265.8 232 65.9
AUR62036014 Chenopodium quinoa HOM05D004659 ORTHO05D005547 4.0e-69 265.4 228 61.4
Cc09_g02380 Coffea canephora HOM05D004659 ORTHO05D005547 4.0e-69 265.4 235 63.8
Mapoly0115s0051 Marchantia polymorpha HOM05D004659 ORTHO05D005547 4.0e-69 265.4 187 76.5
HanXRQChr09g0247171 Helianthus annuus HOM05D004659 ORTHO05D005547 6.9e-69 264.6 227 65.2
Actinidia03015 Actinidia chinensis HOM05D004659 ORTHO05D005547 2.6e-68 262.7 213 65.3
Lj4g0017760 Lotus japonicus HOM05D004659 ORTHO05D005547 3.4e-68 262.3 222 66.2
SGA_v2.0_scaffold62G21448 Striga asiatica HOM05D004659 ORTHO05D005547 4.5e-68 261.9 235 60.9
Duzib106G0066 Durio zibethinus HOM05D004659 ORTHO05D005547 7.6e-68 261.2 235 64.3
ECA232G1287 Erigeron canadensis HOM05D004659 ORTHO05D005547 1.1e-66 257.3 221 64.7
FAN24G1009 Fragaria x ananassa HOM05D004659 ORTHO05D005547 2.4e-66 256.1 182 74.7
SMO239G0117 Selaginella moellendorffii HOM05D004659 ORTHO05D005547 4.2e-66 255.4 176 76.7
FvH4_2g21340 Fragaria vesca HOM05D004659 ORTHO05D005547 5.5e-66 255.0 212 68.4
Os03g0284400 Oryza sativa ssp. japonica HOM05D004659 ORTHO05D005547 1.8e-64 250.0 218 63.3
Zm00001eb013020 Zea mays HOM05D004659 ORTHO05D005547 2.3e-64 249.6 197 67.0
Pp3c2_35950 Physcomitrium patens HOM05D004659 ORTHO05D005547 3.0e-64 249.2 179 72.6
Zm00001eb397230 Zea mays HOM05D004659 ORTHO05D005547 3.9e-64 248.8 224 62.5
Pp3c1_1330 Physcomitrium patens HOM05D004659 ORTHO05D005547 4.3e-63 245.4 188 70.2
AagrBONN_evm.TU.Sc2ySwM_228.2422 Anthoceros agrestis HOM05D004659 ORTHO05D005547 4.8e-62 241.9 179 70.9
Lalb_Chr13g0301081 Lupinus albus HOM05D004659 ORTHO05D005547 1.4e-61 240.4 207 65.7
SMO001G0016 Selaginella moellendorffii HOM05D004659 ORTHO05D005547 1.4e-53 213.8 139 72.7
Dinv31375 Davidia involucrata HOM05D004659 ORTHO05D005547 5.8e-52 208.4 169 65.7
TPR.G37110 Trifolium pratense HOM05D004659 ORTHO05D005547 1.6e-49 200.3 134 70.1
CBR_g32465 Chara braunii HOM05D004659 ORTHO05D005547 5.9e-44 181.8 185 55.1
AL3G24020 Arabidopsis lyrata HOM05D004659 ORTHO05D005547 2.5e-42 176.4 142 59.2
AT3G12370 Arabidopsis thaliana HOM05D004659 ORTHO05D005547 5.5e-42 175.3 141 59.6
Aa31sc153G80 Aethionema arabicum HOM05D004659 ORTHO05D005547 7.2e-42 174.9 142 57.7
Sp3g10560 Schrenkiella parvula HOM05D004659 ORTHO05D005547 7.2e-42 174.9 142 58.5
Thhalv10022434m.g Eutrema salsugineum HOM05D004659 ORTHO05D005547 9.4e-42 174.5 142 58.5
Zm00001eb355270 Zea mays HOM05D004659 ORTHO05D005547 1.6e-41 173.7 137 58.4
C01p52890 Brassica napus HOM05D004659 ORTHO05D005547 2.1e-41 173.3 142 58.5
Carub.0003s1173 Capsella rubella HOM05D004659 ORTHO05D005547 2.1e-41 173.3 140 58.6
BcaC05g29267 Brassica carinata HOM05D004659 ORTHO05D005547 3.6e-41 172.6 142 57.7
C05p55460 Brassica napus HOM05D004659 ORTHO05D005547 3.6e-41 172.6 142 57.7
BolC1t05226H Brassica oleracea HOM05D004659 ORTHO05D005547 3.6e-41 172.6 142 58.5
BolC5t34212H Brassica oleracea HOM05D004659 ORTHO05D005547 3.6e-41 172.6 142 57.7
A05p37030 Brassica napus HOM05D004659 ORTHO05D005547 4.6e-41 172.2 142 57.7
BraA05t22500Z Brassica rapa HOM05D004659 ORTHO05D005547 4.6e-41 172.2 142 57.7
CARHR086910 Cardamine hirsuta HOM05D004659 ORTHO05D005547 4.6e-41 172.2 142 58.5
Os05g0121500 Oryza sativa ssp. japonica HOM05D004659 ORTHO05D005547 1.4e-40 170.6 157 53.5
BcaC09g48234 Brassica carinata HOM05D004659 ORTHO05D005547 2.3e-40 169.9 142 57.7
Haze_16952 Corylus avellana HOM05D004659 ORTHO05D005547 3.0e-40 169.5 224 47.3
SMO306G0014 Selaginella moellendorffii HOM05D004659 ORTHO05D005547 9.7e-39 164.5 102 78.4
HPP92_012064 Vanilla planifolia HOM05D004659 ORTHO05D005547 5.9e-36 155.2 157 48.4
A02p02000 Brassica napus HOM05D004659 ORTHO05D005547 1.4e-34 150.6 103 77.7
Glyma.13G155300 Glycine max HOM05D004659 ORTHO05D005547 3.0e-32 142.9 105 74.3
Hund23274 Selenicereus undatus HOM05D004659 ORTHO05D005547 7.4e-31 138.3 152 48.0
BcaB01g05353 Brassica carinata HOM05D004659 ORTHO05D005547 1.2e-28 131.0 131 61.8
Sc01g0005590 Simmondsia chinensis HOM05D004659 ORTHO05D005547 1.0e-27 127.9 152 46.7
PRCOL_00005567 Prasinoderma coloniale HOM05D004659 ORTHO05D005547 1.7e-27 127.1 178 45.5
Cfa001576 Carpinus fangiana HOM05D004659 ORTHO05D005547 5.0e-27 125.6 224 43.3
Sc26g0002120 Simmondsia chinensis HOM05D004659 ORTHO05D005547 1.5e-26 124.0 152 44.7
Rhsim07G0202500 Rhododendron simsii HOM05D004659 ORTHO05D005547 3.6e-25 119.4 129 57.4
MD17G1117700 Malus domestica HOM05D004659 ORTHO05D005547 1.5e-23 114.0 88 63.6
Pp3c11_2850 Physcomitrium patens HOM05D004659 ORTHO05D005547 1.8e-21 107.1 74 71.6
Sc01g0009170 Simmondsia chinensis HOM05D004659 ORTHO05D005547 1.8e-21 107.1 197 38.6
EL10Ac6g15306 Beta vulgaris HOM05D004659 ORTHO05D005547 9.1e-21 104.8 152 38.2
Ah.09g233850 Amaranthus hybridus HOM05D004659 ORTHO05D005547 1.2e-20 104.4 147 36.7
Cre06.g272850 Chlamydomonas reinhardtii HOM05D004659 ORTHO05D005547 2.7e-20 103.2 173 37.0
GSVIVG01032650001 Vitis vinifera HOM05D004659 ORTHO05D005547 2.7e-20 103.2 226 40.7
Zm00001eb342870 Zea mays HOM05D004659 ORTHO05D005547 7.2e-18 95.1 71 57.7
MBI05_g35481_MAGBIO Magnolia biondii HOM05D004659 ORTHO05D005547 9.4e-18 94.7 101 49.5
Actinidia38237 Actinidia chinensis HOM05D004659 ORTHO05D005547 2.3e-16 90.1 96 56.2
AUR62043493 Chenopodium quinoa HOM05D004659 ORTHO05D005547 1.4e-13 80.9 101 44.6
Medtr3g058560 Medicago truncatula HOM05D004659 ORTHO05D005547 4.2e-10 69.3 48 68.8
AUR62003563 Chenopodium quinoa HOM05D004659 ORTHO05D005547 1.7e-06 57.4 81 40.7
AUR62017877 Chenopodium quinoa HOM05D004659 ORTHO05D005547 1.7e-06 57.4 81 40.7


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