Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy4G03142 Aquilegia oxysepala HOM05D005692 ORTHO05D006953 2.7e-54 214.9 98 100.0
Nn8g38892 Nelumbo nucifera HOM05D005692 ORTHO05D006953 1.8e-42 175.6 98 79.6
Nn6g35447 Nelumbo nucifera HOM05D005692 ORTHO05D006953 6.9e-42 173.7 98 77.6
TAR626G0225 Trochodendron aralioides HOM05D005692 ORTHO05D006953 3.4e-41 171.4 98 74.5
Gohir.A02G019200 Gossypium hirsutum HOM05D005692 ORTHO05D006953 5.9e-41 170.6 98 76.5
Gohir.D02G022500 Gossypium hirsutum HOM05D005692 ORTHO05D006953 2.2e-40 168.7 98 75.5
CiPaw.03G217300 Carya illinoinensis HOM05D005692 ORTHO05D006953 3.8e-40 167.9 98 75.5
Aqoxy1G00378 Aquilegia oxysepala HOM05D005692 ORTHO05D006953 5.0e-40 167.5 100 76.0
Dinv36757 Davidia involucrata HOM05D005692 ORTHO05D006953 1.1e-39 166.4 98 74.5
Gorai.005G027900 Gossypium raimondii HOM05D005692 ORTHO05D006953 1.1e-39 166.4 98 75.5
COL.COLO4_18212 Corchorus olitorius HOM05D005692 ORTHO05D006953 2.5e-39 165.2 97 74.2
Duzib151G0847 Durio zibethinus HOM05D005692 ORTHO05D006953 3.2e-39 164.9 98 74.5
PSO210G0626 Papaver somniferum HOM05D005692 ORTHO05D006953 4.2e-39 164.5 94 71.3
PSO210G2337 Papaver somniferum HOM05D005692 ORTHO05D006953 4.2e-39 164.5 94 71.3
Thecc.09G090700 Theobroma cacao HOM05D005692 ORTHO05D006953 9.4e-39 163.3 98 73.5
vmacro06285 Vaccinium macrocarpon HOM05D005692 ORTHO05D006953 9.4e-39 163.3 98 73.5
vmacro23428 Vaccinium macrocarpon HOM05D005692 ORTHO05D006953 9.4e-39 163.3 98 73.5
CSS0005546 Camellia sinensis var. sinensis HOM05D005692 ORTHO05D006953 2.1e-38 162.2 98 70.4
CSS0025569 Camellia sinensis var. sinensis HOM05D005692 ORTHO05D006953 2.1e-38 162.2 98 70.4
Glyma.08G343600 Glycine max HOM05D005692 ORTHO05D006953 2.7e-38 161.8 98 72.4
Glyma.18G151700 Glycine max HOM05D005692 ORTHO05D006953 3.6e-38 161.4 98 72.4
Manes.03G032800 Manihot esculenta HOM05D005692 ORTHO05D006953 4.6e-38 161.0 98 70.4
Sc14g0000750 Simmondsia chinensis HOM05D005692 ORTHO05D006953 7.9e-38 160.2 87 79.3
Psat6g162800 Pisum sativum HOM05D005692 ORTHO05D006953 1.0e-37 159.8 87 77.0
Hund14283 Selenicereus undatus HOM05D005692 ORTHO05D006953 1.0e-37 159.8 94 73.4
MBI13_g44212_MAGBIO Magnolia biondii HOM05D005692 ORTHO05D006953 1.4e-37 159.5 98 72.4
MBI14_g41836_MAGBIO Magnolia biondii HOM05D005692 ORTHO05D006953 1.4e-37 159.5 98 72.4
Actinidia29885 Actinidia chinensis HOM05D003753 ORTHO05D005081 2.3e-37 158.7 90 74.4
MELO3C015461.2 Cucumis melo HOM05D005692 ORTHO05D006953 2.3e-37 158.7 87 78.2
Phvul.008G136000 Phaseolus vulgaris HOM05D005692 ORTHO05D006953 2.3e-37 158.7 87 75.9
arahy.Tifrunner.gnm1.ann1.JM0M9B Arachis hypogaea HOM05D005692 ORTHO05D006953 3.0e-37 158.3 100 69.0
arahy.Tifrunner.gnm1.ann1.VY1HWT Arachis hypogaea HOM05D005692 ORTHO05D006953 3.0e-37 158.3 100 69.0
Oeu039606.1 Olea europaea HOM05D005692 ORTHO05D006953 3.0e-37 158.3 87 79.3
Rhsim03G0233100 Rhododendron simsii HOM05D005692 ORTHO05D006953 3.0e-37 158.3 95 72.6
HPP92_009139 Vanilla planifolia HOM05D005692 ORTHO05D006953 3.0e-37 158.3 96 71.9
Cc06_g11300 Coffea canephora HOM05D005692 ORTHO05D006953 3.9e-37 157.9 96 74.0
Duzib187G1084 Durio zibethinus HOM05D005692 ORTHO05D006953 3.9e-37 157.9 98 71.4
Medtr7g051450 Medicago truncatula HOM05D005692 ORTHO05D006953 3.9e-37 157.9 86 77.9
Phvul.005G056600 Phaseolus vulgaris HOM05D005692 ORTHO05D006953 3.9e-37 157.9 87 74.7
Psat6g183720 Pisum sativum HOM05D005692 ORTHO05D006953 3.9e-37 157.9 87 75.9
PGR102G3100 Punica granatum HOM05D005692 ORTHO05D006953 3.9e-37 157.9 98 70.4
Ca_07409_v3 Cicer arietinum L. HOM05D005692 ORTHO05D006953 5.1e-37 157.5 87 75.9
Psat6g183640 Pisum sativum HOM05D005692 ORTHO05D006953 5.1e-37 157.5 87 75.9
EL10Ac2g04637 Beta vulgaris HOM05D005692 ORTHO05D006953 6.7e-37 157.1 87 78.2
ClCG03G015670 Citrullus lanatus HOM05D005692 ORTHO05D006953 6.7e-37 157.1 87 74.7
CsaV3_1G040340 Cucumis sativus L. HOM05D005692 ORTHO05D006953 6.7e-37 157.1 87 77.0
Lsat_1_v5_gn_5_145440 Lactuca sativa HOM05D005692 ORTHO05D006953 6.7e-37 157.1 98 69.4
Potri.012G001800 Populus trichocarpa HOM05D005692 ORTHO05D006953 8.8e-37 156.8 86 76.7
Sabra12G0019500 Salix brachista HOM05D005692 ORTHO05D006953 8.8e-37 156.8 86 76.7
Sabra12G0019700 Salix brachista HOM05D005692 ORTHO05D006953 8.8e-37 156.8 86 76.7
Lalb_Chr03g0041061 Lupinus albus HOM05D005692 ORTHO05D006953 1.1e-36 156.4 98 70.4
Atru.BG.21.p Acer truncatum HOM05D005692 ORTHO05D006953 1.5e-36 156.0 89 74.2
Cpa.g.sc20.158 Carica papaya HOM05D005692 ORTHO05D006953 1.5e-36 156.0 96 69.8
Cfa003097 Carpinus fangiana HOM05D005692 ORTHO05D006953 1.5e-36 156.0 98 69.4
AUR62039390 Chenopodium quinoa HOM05D005692 ORTHO05D006953 1.5e-36 156.0 87 78.2
ECA234G3968 Erigeron canadensis HOM05D005692 ORTHO05D006953 1.5e-36 156.0 98 69.4
HanXRQChr10g0319271 Helianthus annuus HOM05D005692 ORTHO05D006953 2.5e-36 155.2 98 69.4
Lj1g0023726 Lotus japonicus HOM05D005692 ORTHO05D006953 2.5e-36 155.2 87 74.7
Phvul.008G136200 Phaseolus vulgaris HOM05D005692 ORTHO05D006953 2.5e-36 155.2 87 74.7
Sed0014309 Sechium edule HOM05D005692 ORTHO05D006953 2.5e-36 155.2 87 74.7
Ciclev10010392m.g Citrus clementina HOM05D005692 ORTHO05D006953 4.3e-36 154.5 98 69.4
DCAR_011984 Daucus carota HOM05D005692 ORTHO05D006953 4.3e-36 154.5 87 74.7
Ah.09g223860 Amaranthus hybridus HOM05D005692 ORTHO05D006953 7.4e-36 153.7 87 75.9
TWI34G0948 Tripterygium wilfordii HOM05D005692 ORTHO05D006953 7.4e-36 153.7 101 71.3
PGSC0003DMG400000281 Solanum tuberosum HOM05D005692 ORTHO05D006953 9.7e-36 153.3 94 70.2
Medtr7g021900 Medicago truncatula HOM05D005692 ORTHO05D006953 1.7e-35 152.5 86 75.6
Nitab4.5_0000540g0260 Nicotiana tabacum HOM05D005692 ORTHO05D006953 1.7e-35 152.5 94 69.1
Nitab4.5_0009931g0010 Nicotiana tabacum HOM05D005692 ORTHO05D006953 1.7e-35 152.5 94 69.1
Ah.10g037300 Amaranthus hybridus HOM05D005692 ORTHO05D006953 2.2e-35 152.1 87 75.9
ATR0602G199 Amborella trichopoda HOM05D005692 ORTHO05D006953 2.2e-35 152.1 94 72.3
HanXRQChr12g0354791 Helianthus annuus HOM05D005692 ORTHO05D006953 2.8e-35 151.8 98 68.4
Sopen12g003750 Solanum pennellii HOM05D005692 ORTHO05D006953 2.8e-35 151.8 94 69.1
THA.LOC104801884 Tarenaya hassleriana HOM05D005692 ORTHO05D006953 3.7e-35 151.4 102 67.6
Atru.BG.266.p Acer truncatum HOM05D005692 ORTHO05D006953 6.3e-35 150.6 89 73.0
CAN.G1241.20 Capsicum annuum HOM05D005692 ORTHO05D006953 6.3e-35 150.6 94 68.1
MD02G1077000 Malus domestica HOM05D005692 ORTHO05D006953 6.3e-35 150.6 88 71.6
Solyc12g008810.2 Solanum lycopersicum HOM05D005692 ORTHO05D006953 6.3e-35 150.6 94 68.1
Migut.J00600 Erythranthe guttata HOM05D005692 ORTHO05D006953 1.1e-34 149.8 94 68.1
Migut.J01065 Erythranthe guttata HOM05D005692 ORTHO05D006953 1.1e-34 149.8 94 68.1
Peaxi162Scf00015g00716 Petunia axillaris HOM05D005692 ORTHO05D006953 1.4e-34 149.4 91 69.2
Psat6g183440 Pisum sativum HOM05D005692 ORTHO05D006953 1.8e-34 149.1 87 73.6
Duzib187G0878 Durio zibethinus HOM05D005692 ORTHO05D006953 2.4e-34 148.7 98 68.4
Eucgr.C03889 Eucalyptus grandis HOM05D005692 ORTHO05D006953 5.3e-34 147.5 87 70.1
Nitab4.5_0003152g0130 Nicotiana tabacum HOM05D005692 ORTHO05D006953 5.3e-34 147.5 94 68.1
TWI32G0831 Tripterygium wilfordii HOM05D005692 ORTHO05D006953 5.3e-34 147.5 101 69.3
MD15G1205700 Malus domestica HOM05D005692 ORTHO05D006953 6.9e-34 147.1 88 70.5
Prupe.7G211400 Prunus persica HOM05D005692 ORTHO05D006953 2.0e-33 145.6 88 65.9
RcHm_v2.0_Chr2g0093151 Rosa chinensis HOM05D005692 ORTHO05D006953 3.4e-33 144.8 87 67.8
SGA_v2.0_scaffold62G21600 Striga asiatica HOM05D005692 ORTHO05D006953 3.4e-33 144.8 87 71.3
VMungo1383G2743 Vigna mungo HOM05D005692 ORTHO05D006953 4.5e-33 144.4 109 61.5
Migut.H00760 Erythranthe guttata HOM05D005692 ORTHO05D006953 5.9e-33 144.1 91 67.0
FvH4_1g07240 Fragaria vesca HOM05D005692 ORTHO05D006953 5.9e-33 144.1 87 67.8
FAN26G0193 Fragaria x ananassa HOM05D005692 ORTHO05D006953 5.9e-33 144.1 87 67.8
CANSAT78G0210 Cannabis sativa HOM05D005692 ORTHO05D006953 1.0e-32 143.3 89 64.0
AUR62033506 Chenopodium quinoa HOM05D005692 ORTHO05D006953 1.7e-32 142.5 107 62.6
FAN19G0937 Fragaria x ananassa HOM05D005692 ORTHO05D006953 2.2e-32 142.1 86 67.4
FAN23G0510 Fragaria x ananassa HOM05D005692 ORTHO05D006953 2.2e-32 142.1 86 67.4
FAN26G1568 Fragaria x ananassa HOM05D005692 ORTHO05D006953 2.2e-32 142.1 86 67.4
SGA_v2.0_scaffold852G53671 Striga asiatica HOM05D005692 ORTHO05D006953 2.9e-32 141.7 87 70.1
Migut.H01159 Erythranthe guttata HOM05D005692 ORTHO05D006953 5.0e-32 141.0 94 63.8
FAN19G2784 Fragaria x ananassa HOM05D005692 ORTHO05D006953 6.5e-32 140.6 87 65.5
GSVIVG01015215001 Vitis vinifera HOM05D005692 ORTHO05D006953 8.5e-32 140.2 98 63.3
Peaxi162Scf00354g00223 Petunia axillaris HOM05D005692 ORTHO05D006953 2.5e-31 138.7 94 67.0
SGA_v2.0_scaffold33G13431 Striga asiatica HOM05D005692 ORTHO05D006953 2.5e-31 138.7 91 68.1
SHI00379 Sapria himalayana HOM05D005692 ORTHO05D006953 1.6e-30 136.0 78 71.8
Os05g0540200 Oryza sativa ssp. japonica HOM05D005692 ORTHO05D006953 2.7e-30 135.2 87 66.7
FvH4_1g24820 Fragaria vesca HOM05D005692 ORTHO05D006953 4.7e-30 134.4 87 63.2
unitig_748.g8121 Utricularia gibba HOM05D005692 ORTHO05D006953 6.1e-30 134.0 87 66.7
Aa31LG2G20910 Aethionema arabicum HOM05D005692 ORTHO05D006953 7.9e-30 133.7 87 62.1
CARHR237500 Cardamine hirsuta HOM05D005692 ORTHO05D006953 1.4e-29 132.9 87 64.4
BcaC09g51744 Brassica carinata HOM05D005692 ORTHO05D006953 1.8e-29 132.5 87 64.4
Thhalv10026646m.g Eutrema salsugineum HOM05D005692 ORTHO05D006953 2.3e-29 132.1 87 64.4
Nitab4.5_0003079g0020 Nicotiana tabacum HOM05D005692 ORTHO05D006953 2.3e-29 132.1 82 69.5
AL7G22650 Arabidopsis lyrata HOM05D005692 ORTHO05D006953 3.0e-29 131.7 85 64.7
AT4G29660 Arabidopsis thaliana HOM05D005692 ORTHO05D006953 3.0e-29 131.7 85 64.7
Carub.0007s1086 Capsella rubella HOM05D005692 ORTHO05D006953 3.0e-29 131.7 85 64.7
BcaC09g52211 Brassica carinata HOM05D005692 ORTHO05D006953 8.8e-29 130.2 85 63.5
A01p08470 Brassica napus HOM05D005692 ORTHO05D006953 8.8e-29 130.2 85 63.5
C01p09830 Brassica napus HOM05D005692 ORTHO05D006953 8.8e-29 130.2 85 63.5
BolC1t00945H Brassica oleracea HOM05D005692 ORTHO05D006953 8.8e-29 130.2 85 63.5
BraA01t00794Z Brassica rapa HOM05D005692 ORTHO05D006953 8.8e-29 130.2 85 63.5
Sp7g27450 Schrenkiella parvula HOM05D005692 ORTHO05D006953 1.5e-28 129.4 85 64.7
Sp3g29900 Schrenkiella parvula HOM05D005692 ORTHO05D006953 9.7e-28 126.7 85 63.5
Nitab4.5_0000095g0140 Nicotiana tabacum HOM05D005692 ORTHO05D006953 1.7e-27 125.9 105 57.1
Nitab4.5_0008958g0020 Nicotiana tabacum HOM05D005692 ORTHO05D006953 1.7e-27 125.9 78 70.5
Nitab4.5_0004795g0020 Nicotiana tabacum HOM05D005692 ORTHO05D006953 2.8e-27 125.2 80 70.0
CDE06G0459 Ceratophyllum demersum HOM05D005692 ORTHO05D006953 4.8e-27 124.4 74 71.6
CDE06G1459 Ceratophyllum demersum HOM05D005692 ORTHO05D006953 3.8e-24 114.8 66 74.2
SHI21206 Sapria himalayana HOM05D005692 ORTHO05D006953 1.5e-23 112.8 63 73.0
Peaxi162Scf00498g00124 Petunia axillaris HOM05D005692 ORTHO05D006953 7.2e-23 110.5 66 72.7
TPR.G24304 Trifolium pratense HOM05D005692 ORTHO05D006953 1.0e-21 106.7 62 74.2
Psat0s10921g0080 Pisum sativum HOM05D005692 ORTHO05D006953 1.5e-20 102.8 61 72.1
SGA_v2.0_scaffold33G13433 Striga asiatica HOM05D000524 ORTHO05D000381 2.2e-19 99.0 61 72.1
Mapoly0063s0096 Marchantia polymorpha HOM05D005692 ORTHO05D006953 1.0e-16 90.1 72 54.2
CBR_g36562 Chara braunii HOM05D005692 ORTHO05D006953 1.7e-16 89.4 70 55.7
FAN19G3189 Fragaria x ananassa HOM05D005692 ORTHO05D006953 8.5e-16 87.0 74 48.6
Zm00001eb294300 Zea mays HOM05D005692 ORTHO05D006953 9.1e-10 67.0 61 52.5
Haze_25902 Corylus avellana HOM05D001256 ORTHO05D001141 3.5e-09 65.1 43 62.8
Pp3c13_20310 Physcomitrium patens HOM05D005692 ORTHO05D006953 7.2e-07 57.4 57 42.1


User provided reference genes

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