Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy4G03135 Aquilegia oxysepala HOM05D000081 ORTHO05D018415 4.7e-70 267.7 132 100.0
Aqoxy4G03140 Aquilegia oxysepala HOM05D000081 ORTHO05D000036 4.1e-21 105.1 57 100.0
TAR623G0836 Trochodendron aralioides HOM05D000081 ORTHO05D000036 2.5e-10 69.3 53 69.8
TAR369G0078 Trochodendron aralioides HOM05D000081 ORTHO05D000036 4.2e-10 68.6 57 68.4
Nn2g10594 Nelumbo nucifera HOM05D000081 ORTHO05D000036 8.0e-09 64.3 53 66.0
Nn2g10599 Nelumbo nucifera HOM05D000081 ORTHO05D000036 8.0e-09 64.3 53 66.0
Atru.chr8.2526 Acer truncatum HOM05D000081 ORTHO05D000036 1.8e-08 63.2 57 64.9
Nn1g02873 Nelumbo nucifera HOM05D000081 ORTHO05D018415 2.3e-08 62.8 53 64.2
Thecc.05G051600 Theobroma cacao HOM05D000081 ORTHO05D000036 1.5e-07 60.1 52 63.5
Actinidia19724 Actinidia chinensis HOM05D000081 ORTHO05D000036 3.3e-07 58.9 53 60.4
CSS0009754 Camellia sinensis var. sinensis HOM05D000081 ORTHO05D000036 3.3e-07 58.9 50 64.0
CSS0049199 Camellia sinensis var. sinensis HOM05D000081 ORTHO05D000036 3.3e-07 58.9 50 64.0
Duzib093G1232 Durio zibethinus HOM05D000081 ORTHO05D000036 3.3e-07 58.9 56 62.5
PSO210G0691 Papaver somniferum HOM05D000081 ORTHO05D000036 3.3e-07 58.9 54 64.8
PSO210G7194 Papaver somniferum HOM05D000081 ORTHO05D000036 3.3e-07 58.9 54 64.8
Cpa.g.sc114.62 Carica papaya HOM05D000081 ORTHO05D000036 4.4e-07 58.5 50 64.0
Manes.08G001500 Manihot esculenta HOM05D000081 ORTHO05D000036 4.4e-07 58.5 56 60.7
Gohir.A04G077300 Gossypium hirsutum HOM05D000081 ORTHO05D000036 5.7e-07 58.2 56 62.5
VMungo1383G2699 Vigna mungo HOM05D000081 ORTHO05D000036 5.7e-07 58.2 55 58.2
GSVIVG01025562001 Vitis vinifera HOM05D000081 ORTHO05D000036 5.7e-07 58.2 53 60.4
CiPaw.09G184100 Carya illinoinensis HOM05D000081 ORTHO05D000036 7.5e-07 57.8 54 63.0
Actinidia13114 Actinidia chinensis HOM05D000081 ORTHO05D000036 9.7e-07 57.4 54 61.1
CSS0016070 Camellia sinensis var. sinensis HOM05D000081 ORTHO05D000036 9.7e-07 57.4 52 59.6
Medtr7g100510 Medicago truncatula HOM05D000081 ORTHO05D000036 9.7e-07 57.4 52 57.7
vmacro08686 Vaccinium macrocarpon HOM05D000081 ORTHO05D000036 1.3e-06 57.0 53 58.5
ClCG10G020670 Citrullus lanatus HOM05D000081 ORTHO05D000036 1.7e-06 56.6 50 62.0
MELO3C009302.2 Cucumis melo HOM05D000081 ORTHO05D000036 1.7e-06 56.6 50 60.0
QL07p045657 Quercus lobata HOM05D000081 ORTHO05D000036 1.7e-06 56.6 50 64.0
RcHm_v2.0_Chr3g0468221 Rosa chinensis HOM05D000081 ORTHO05D000036 1.7e-06 56.6 57 57.9
Sabra16G0090800 Salix brachista HOM05D000081 ORTHO05D000036 1.7e-06 56.6 56 62.5
Cfa017484 Carpinus fangiana HOM05D000081 ORTHO05D000036 2.2e-06 56.2 50 64.0
Haze_20674 Corylus avellana HOM05D000081 ORTHO05D000036 2.2e-06 56.2 50 64.0
Potri.016G083600 Populus trichocarpa HOM05D000081 ORTHO05D000036 2.2e-06 56.2 66 54.5
CsaV3_3G035430 Cucumis sativus L. HOM05D000081 ORTHO05D000036 2.8e-06 55.8 50 62.0
Gohir.D04G116400 Gossypium hirsutum HOM05D000081 ORTHO05D000036 2.8e-06 55.8 56 60.7
Sabra06G0104700 Salix brachista HOM05D000081 ORTHO05D000036 2.8e-06 55.8 56 60.7
Lj1g0010374 Lotus japonicus HOM05D000081 ORTHO05D000036 3.7e-06 55.5 53 60.4
Lalb_Chr25g0289301 Lupinus albus HOM05D000081 ORTHO05D000036 3.7e-06 55.5 52 59.6
Phvul.001G173700 Phaseolus vulgaris HOM05D000081 ORTHO05D000036 3.7e-06 55.5 55 56.4
Cc06_g03470 Coffea canephora HOM05D000081 ORTHO05D000036 4.8e-06 55.1 51 60.8
CiPaw.10G138200 Carya illinoinensis HOM05D000081 ORTHO05D000036 6.3e-06 54.7 56 62.5
Ca_08815_v3 Cicer arietinum L. HOM05D000081 ORTHO05D000036 6.3e-06 54.7 52 51.9
Glyma.19G177400 Glycine max HOM05D000081 ORTHO05D000036 6.3e-06 54.7 52 59.6
Gorai.009G421200 Gossypium raimondii HOM05D000081 ORTHO05D000036 6.3e-06 54.7 56 58.9
Ciclev10011660m.g Citrus clementina HOM05D000081 ORTHO05D000036 8.2e-06 54.3 50 62.0
Dinv35691 Davidia involucrata HOM05D000081 ORTHO05D000036 8.2e-06 54.3 50 60.0
Duzib106G0900 Durio zibethinus HOM05D000081 ORTHO05D000036 8.2e-06 54.3 56 58.9
Prupe.6G244300 Prunus persica HOM05D000081 ORTHO05D000036 8.2e-06 54.3 50 62.0


User provided reference genes

Program Settings