Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy4G03118 Aquilegia oxysepala HOM05D004805 ORTHO05D005756 3.0e-142 508.4 251 100.0
TAR626G0989 Trochodendron aralioides HOM05D004805 ORTHO05D005756 3.9e-105 385.2 249 76.3
Cfa020188 Carpinus fangiana HOM05D004805 ORTHO05D005756 2.4e-102 375.9 245 73.1
Nn1g07520 Nelumbo nucifera HOM05D004805 ORTHO05D005756 5.2e-102 374.8 251 72.9
Haze_09828 Corylus avellana HOM05D004805 ORTHO05D005756 2.6e-101 372.5 245 72.2
Dinv10336 Davidia involucrata HOM05D004805 ORTHO05D005756 4.9e-100 368.2 249 71.9
Lalb_Chr09g0322761 Lupinus albus HOM05D004805 ORTHO05D005756 4.9e-100 368.2 251 68.9
CSS0002120 Camellia sinensis var. sinensis HOM05D004805 ORTHO05D005756 8.4e-100 367.5 248 71.4
CiPaw.12G138400 Carya illinoinensis HOM05D004805 ORTHO05D005756 8.4e-100 367.5 245 71.8
LjContig00081g0004731 Lotus japonicus HOM05D004805 ORTHO05D005756 3.5e-98 362.1 251 69.3
FvH4_3g11630 Fragaria vesca HOM05D004805 ORTHO05D005756 7.8e-98 360.9 251 68.9
TPR.G8592 Trifolium pratense HOM05D004805 ORTHO05D005756 7.8e-98 360.9 251 68.5
Atru.chr13.2016 Acer truncatum HOM05D004805 ORTHO05D005756 1.3e-97 360.1 251 68.9
Atru.chr9.1539 Acer truncatum HOM05D004805 ORTHO05D005756 1.7e-97 359.8 251 68.9
PSO832G0973 Papaver somniferum HOM05D004805 ORTHO05D005756 1.7e-97 359.8 252 67.5
Duzib268G0855 Durio zibethinus HOM05D004805 ORTHO05D005756 2.3e-97 359.4 251 69.3
FAN16G0962 Fragaria x ananassa HOM05D004805 ORTHO05D005756 2.3e-97 359.4 251 68.9
FAN25G0449 Fragaria x ananassa HOM05D004805 ORTHO05D005756 2.3e-97 359.4 251 68.9
Prupe.3G149500 Prunus persica HOM05D004805 ORTHO05D005756 2.3e-97 359.4 249 69.9
GSVIVG01014691001 Vitis vinifera HOM05D004805 ORTHO05D005756 2.3e-97 359.4 251 70.9
RcHm_v2.0_Chr5g0018651 Rosa chinensis HOM05D004805 ORTHO05D005756 3.0e-97 359.0 251 68.9
Phvul.008G279200 Phaseolus vulgaris HOM05D004805 ORTHO05D005756 3.9e-97 358.6 251 66.5
Psat2g007280 Pisum sativum HOM05D004805 ORTHO05D005756 6.6e-97 357.8 251 68.1
Glyma.17G150300 Glycine max HOM05D004805 ORTHO05D005756 1.1e-96 357.1 245 69.0
Glyma.14G013400 Glycine max HOM05D004805 ORTHO05D005756 2.5e-96 355.9 245 68.6
RcHm_v2.0_Chr7g0241681 Rosa chinensis HOM05D004805 ORTHO05D005756 2.5e-96 355.9 251 67.7
Gorai.004G033700 Gossypium raimondii HOM05D004805 ORTHO05D005756 7.3e-96 354.4 251 68.1
Lj1g0004670 Lotus japonicus HOM05D004805 ORTHO05D005756 1.3e-95 353.6 251 67.3
Ca_06397_v3 Cicer arietinum L. HOM05D004805 ORTHO05D005756 1.6e-95 353.2 251 68.1
arahy.Tifrunner.gnm1.ann1.KL44N8 Arachis hypogaea HOM05D004805 ORTHO05D005756 2.1e-95 352.8 251 67.3
Medtr5g095960 Medicago truncatula HOM05D004805 ORTHO05D005756 2.8e-95 352.4 251 66.5
arahy.Tifrunner.gnm1.ann1.1A96RS Arachis hypogaea HOM05D004805 ORTHO05D005756 3.6e-95 352.1 251 67.3
PSO063G7513 Papaver somniferum HOM05D004805 ORTHO05D005756 4.8e-95 351.7 247 67.2
Rhsim06G0229900 Rhododendron simsii HOM05D004805 ORTHO05D005756 4.8e-95 351.7 248 69.4
Actinidia30402 Actinidia chinensis HOM05D004805 ORTHO05D005756 6.2e-95 351.3 248 69.8
Ciclev10009329m.g Citrus clementina HOM05D004805 ORTHO05D005756 1.1e-94 350.5 251 67.3
Lj1C890G11 Lonicera japonica HOM05D004805 ORTHO05D005756 1.4e-94 350.1 251 70.1
PGR142G3095 Punica granatum HOM05D004805 ORTHO05D005756 1.8e-94 349.7 249 67.5
MD05G1261800 Malus domestica HOM05D004805 ORTHO05D005756 2.4e-94 349.4 251 68.1
Peaxi162Scf00139g01316 Petunia axillaris HOM05D004805 ORTHO05D005756 2.4e-94 349.4 242 69.4
ClCG10G004450 Citrullus lanatus HOM05D004805 ORTHO05D005756 4.0e-94 348.6 245 67.3
DCAR_013232 Daucus carota HOM05D004805 ORTHO05D005756 6.9e-94 347.8 248 68.1
CANSAT11G2385 Cannabis sativa HOM05D004805 ORTHO05D005756 1.2e-93 347.1 248 69.0
Eucgr.F03688 Eucalyptus grandis HOM05D004805 ORTHO05D005756 1.2e-93 347.1 251 67.7
CsaV3_3G004240 Cucumis sativus L. HOM05D004805 ORTHO05D005756 1.5e-93 346.7 245 65.7
CAN.G623.13 Capsicum annuum HOM05D004805 ORTHO05D005756 7.6e-93 344.4 242 67.4
Carub.0008s1616 Capsella rubella HOM05D004805 ORTHO05D005756 8.4e-92 340.9 244 67.2
Actinidia05003 Actinidia chinensis HOM05D004805 ORTHO05D005756 1.1e-91 340.5 245 69.0
BcaC04g20199 Brassica carinata HOM05D004805 ORTHO05D005756 1.1e-91 340.5 244 66.8
Cc00_g18290 Coffea canephora HOM05D004805 ORTHO05D005756 1.4e-91 340.1 240 67.5
ECA234G3028 Erigeron canadensis HOM05D004805 ORTHO05D005756 1.9e-91 339.7 244 68.0
HanXRQChr03g0074031 Helianthus annuus HOM05D004805 ORTHO05D005756 2.4e-91 339.3 238 70.6
Solyc07g065590.4 Solanum lycopersicum HOM05D004805 ORTHO05D005756 2.4e-91 339.3 242 67.8
Sopen07g033800 Solanum pennellii HOM05D004805 ORTHO05D005756 2.4e-91 339.3 242 68.6
AL8G31370 Arabidopsis lyrata HOM05D004805 ORTHO05D005756 4.2e-91 338.6 244 66.8
BcaB01g04372 Brassica carinata HOM05D004805 ORTHO05D005756 5.4e-91 338.2 244 66.0
SGA_v2.0_scaffold44G16806 Striga asiatica HOM05D001081 ORTHO05D003320 7.1e-91 337.8 246 67.5
AT5G55810 Arabidopsis thaliana HOM05D004805 ORTHO05D005756 9.3e-91 337.4 244 65.2
THA.LOC104811668 Tarenaya hassleriana HOM05D004805 ORTHO05D005756 3.5e-90 335.5 246 66.7
Aa31LG3G11710 Aethionema arabicum HOM05D004805 ORTHO05D005756 6.0e-90 334.7 244 65.2
Sed0016007 Sechium edule HOM05D004805 ORTHO05D005756 6.0e-90 334.7 245 64.9
BcaC01g06393 Brassica carinata HOM05D004805 ORTHO05D005756 7.9e-90 334.3 244 64.8
PGSC0003DMG400022170 Solanum tuberosum HOM05D004805 ORTHO05D005756 2.3e-89 332.8 213 72.8
MELO3C014119.2 Cucumis melo HOM05D004805 ORTHO05D005756 5.1e-89 331.6 291 57.0
Sp6g17690 Schrenkiella parvula HOM05D004805 ORTHO05D005756 5.1e-89 331.6 244 64.3
BcaB08g35939 Brassica carinata HOM05D004805 ORTHO05D005756 1.1e-88 330.5 251 64.1
CARHR269130 Cardamine hirsuta HOM05D004805 ORTHO05D005756 5.6e-88 328.2 244 65.2
HPP92_025829 Vanilla planifolia HOM05D004805 ORTHO05D005756 9.6e-88 327.4 245 63.7
Lsat_1_v5_gn_9_89740 Lactuca sativa HOM05D004805 ORTHO05D005756 1.6e-87 326.6 244 66.4
Duzib213G0036 Durio zibethinus HOM05D004805 ORTHO05D005756 4.8e-87 325.1 251 65.3
SalBow4G0417 Salvia bowleyana HOM05D004805 ORTHO05D005756 6.2e-87 324.7 274 60.2
Carub.0005s0937 Capsella rubella HOM05D004805 ORTHO05D005756 1.8e-86 323.2 243 64.6
Carub.0005s0950 Capsella rubella HOM05D004805 ORTHO05D005756 1.8e-86 323.2 243 64.6
Manes.03G141600 Manihot esculenta HOM05D004805 ORTHO05D005756 1.8e-86 323.2 251 63.7
Gohir.D08G035700 Gossypium hirsutum HOM05D004805 ORTHO05D005756 9.0e-86 320.9 251 64.1
MSTRG.27026 Avicennia marina HOM05D004805 ORTHO05D005756 1.5e-85 320.1 241 65.1
ATR0090G032 Amborella trichopoda HOM05D004805 ORTHO05D005756 3.4e-85 318.9 213 71.4
Gohir.A08G025200 Gossypium hirsutum HOM05D004805 ORTHO05D005756 5.8e-85 318.2 251 63.7
EL10Ac1g00341 Beta vulgaris HOM05D004805 ORTHO05D005756 7.6e-85 317.8 250 62.4
QL08p004083 Quercus lobata HOM05D004805 ORTHO05D005756 3.8e-84 315.5 206 71.8
MD10G1240100 Malus domestica HOM05D004805 ORTHO05D005756 2.4e-83 312.8 206 72.3
TWI38G2348 Tripterygium wilfordii HOM05D004805 ORTHO05D005756 4.2e-83 312.0 205 71.7
Potri.013G021900 Populus trichocarpa HOM05D004805 ORTHO05D005756 1.6e-82 310.1 241 61.8
Potri.005G032300 Populus trichocarpa HOM05D004805 ORTHO05D005756 2.7e-82 309.3 250 60.4
Zm00001eb191530 Zea mays HOM05D004805 ORTHO05D005756 1.0e-81 307.4 243 61.3
Sabra05G0034900 Salix brachista HOM05D004805 ORTHO05D005756 3.9e-81 305.4 250 59.6
Nitab4.5_0002736g0040 Nicotiana tabacum HOM05D004805 ORTHO05D005756 6.7e-81 304.7 192 73.4
VMungo0647G2576 Vigna mungo HOM05D004805 ORTHO05D005756 3.3e-80 302.4 200 69.5
Hma1.2p1_1402F.1_g281100 Hydrangea macrophylla HOM05D004805 ORTHO05D005756 4.8e-79 298.5 217 66.8
vmacro11591 Vaccinium macrocarpon HOM05D004805 ORTHO05D005756 4.0e-78 295.4 258 58.5
Nitab4.5_0007415g0050 Nicotiana tabacum HOM05D004805 ORTHO05D005756 5.3e-78 295.0 195 70.8
C09p46750 Brassica napus HOM05D004805 ORTHO05D005756 6.9e-78 294.7 218 65.1
BolC9t57526H Brassica oleracea HOM05D004805 ORTHO05D005756 6.9e-78 294.7 218 65.1
C03p16250 Brassica napus HOM05D004805 ORTHO05D005756 1.2e-77 293.9 217 63.6
A03p13810 Brassica napus HOM05D004805 ORTHO05D005756 3.4e-77 292.4 217 62.2
A10p13030 Brassica napus HOM05D004805 ORTHO05D005756 3.4e-77 292.4 218 65.1
BraA10t43397Z Brassica rapa HOM05D004805 ORTHO05D005756 1.7e-76 290.0 218 64.2
AUR62022629 Chenopodium quinoa HOM05D004805 ORTHO05D005756 1.7e-76 290.0 245 61.2
Hund27237 Selenicereus undatus HOM05D004805 ORTHO05D005756 1.7e-76 290.0 275 56.7
Pp3c10_25720 Physcomitrium patens HOM05D004805 ORTHO05D005756 1.4e-75 287.0 245 57.1
Sc16g0008090 Simmondsia chinensis HOM05D004805 ORTHO05D005756 1.4e-75 287.0 246 58.9
Mapoly0011s0011 Marchantia polymorpha HOM05D004805 ORTHO05D005756 2.7e-74 282.7 242 58.7
Pp3c20_23380 Physcomitrium patens HOM05D004805 ORTHO05D005756 2.7e-74 282.7 245 57.6
AagrBONN_evm.TU.Sc2ySwM_362.484 Anthoceros agrestis HOM05D004805 ORTHO05D005756 6.0e-74 281.6 245 55.5
Medtr3g007850 Medicago truncatula HOM05D004805 ORTHO05D005756 9.6e-72 274.2 195 67.2
Thecc.07G013300 Theobroma cacao HOM05D004805 ORTHO05D005756 3.7e-71 272.3 182 70.9
Pp3c3_17230 Physcomitrium patens HOM05D004805 ORTHO05D005756 2.4e-70 269.6 242 53.3
Lsat_1_v5_gn_4_137701 Lactuca sativa HOM05D004805 ORTHO05D005756 4.2e-67 258.8 197 66.0
AUR62004423 Chenopodium quinoa HOM05D004805 ORTHO05D005756 5.5e-67 258.5 166 74.1
SGA_v2.0_scaffold192G40544 Striga asiatica HOM05D001081 ORTHO05D003320 7.9e-66 254.6 232 57.3
Pp3c13_13680 Physcomitrium patens HOM05D004805 ORTHO05D005756 1.8e-65 253.4 244 50.4
Prupe.4G103800 Prunus persica HOM05D004805 ORTHO05D005756 3.0e-65 252.7 249 52.6
AagrBONN_evm.TU.Sc2ySwM_228.3487 Anthoceros agrestis HOM05D004805 ORTHO05D005756 6.7e-65 251.5 228 53.1
CAN.G849.12 Capsicum annuum HOM05D004805 ORTHO05D005756 8.7e-65 251.1 183 63.9
Migut.F01027 Erythranthe guttata HOM05D004805 ORTHO05D005756 9.7e-64 247.7 243 53.9
AagrBONN_evm.TU.Sc2ySwM_344.1047 Anthoceros agrestis HOM05D004805 ORTHO05D005756 2.9e-60 236.1 216 52.8
CARHR269180 Cardamine hirsuta HOM05D004805 ORTHO05D005756 3.8e-60 235.7 164 67.1
Hma1.2p1_1516F.1_g288260 Hydrangea macrophylla HOM05D004805 ORTHO05D005756 3.8e-60 235.7 198 61.6
TAR624G1110 Trochodendron aralioides HOM05D004805 ORTHO05D005756 6.1e-58 228.4 197 60.9
FAN21G3052 Fragaria x ananassa HOM05D004805 ORTHO05D005756 1.0e-57 227.6 195 59.5
CBR_g34363 Chara braunii HOM05D000019 ORTHO05D000002 3.0e-57 226.1 213 52.6
SMO364G0361 Selaginella moellendorffii HOM05D004805 ORTHO05D005756 1.7e-55 220.3 216 50.0
Ah.05g180060 Amaranthus hybridus HOM05D004805 ORTHO05D005756 2.8e-55 219.5 180 63.3
Glyma.19G097900 Glycine max HOM05D004805 ORTHO05D005756 8.2e-55 218.0 143 71.3
Lj3g0007860 Lotus japonicus HOM05D004805 ORTHO05D005756 1.1e-54 217.6 244 51.6
AagrBONN_evm.TU.Sc2ySwM_344.1045 Anthoceros agrestis HOM05D004805 ORTHO05D005756 5.9e-53 211.8 194 54.1
DCAR_000844 Daucus carota HOM05D004805 ORTHO05D007187 6.5e-52 208.4 172 61.0
BraA03t10684Z Brassica rapa HOM05D004805 ORTHO05D005756 3.2e-51 206.1 233 48.1
Rhsim04G0012600 Rhododendron simsii HOM05D004805 ORTHO05D005756 4.2e-51 205.7 188 56.9
BolC3t14047H Brassica oleracea HOM05D004805 ORTHO05D005756 2.4e-46 189.9 243 44.9
Thhalv10015421m.g Eutrema salsugineum HOM05D004805 ORTHO05D005756 7.7e-45 184.9 192 51.0
Os02g0814900 Oryza sativa ssp. japonica HOM05D004805 ORTHO05D005756 7.7e-45 184.9 195 50.3
COL.COLO4_09836 Corchorus olitorius HOM05D004805 ORTHO05D005756 1.7e-44 183.7 138 66.7
Cpa.g.sc26.30 Carica papaya HOM05D004805 ORTHO05D005756 9.4e-43 177.9 114 74.6
PRCOL_00003123 Prasinoderma coloniale HOM05D004805 ORTHO05D005756 2.6e-40 169.9 222 42.8
ECA240G4670 Erigeron canadensis HOM05D004805 ORTHO05D005756 7.5e-40 168.3 103 76.7
unitig_0.g252 Utricularia gibba HOM05D004805 ORTHO05D005756 1.7e-36 157.1 104 69.2
Os09g0347900 Oryza sativa ssp. japonica HOM05D004805 ORTHO05D005756 1.1e-35 154.5 106 64.2
Glyma.02G300600 Glycine max HOM05D004805 ORTHO05D005756 2.1e-34 150.2 110 65.5
PSO170G0902 Papaver somniferum HOM05D004805 ORTHO05D005756 6.8e-33 145.2 114 61.4
QL08p004070 Quercus lobata HOM05D000031 ORTHO05D005756 4.4e-32 142.5 239 39.3
Hma1.2p1_0226F.1_g095340 Hydrangea macrophylla HOM05D004805 ORTHO05D005756 1.6e-29 134.0 161 47.8
SEGI_22417 Sequoiadendron giganteum HOM05D004805 ORTHO05D005756 8.3e-23 111.7 101 55.4
Cfa025186 Carpinus fangiana HOM05D004805 ORTHO05D005756 1.8e-22 110.5 161 37.9
ECA234G1395 Erigeron canadensis HOM05D004805 ORTHO05D005756 1.0e-17 94.7 67 68.7
CBR_g34381 Chara braunii HOM05D000019 ORTHO05D000048 1.4e-14 84.3 81 51.9
FAN24G2452 Fragaria x ananassa HOM05D004805 ORTHO05D005756 2.7e-13 80.1 55 70.9
SEGI_01519 Sequoiadendron giganteum HOM05D004805 ORTHO05D005756 2.7e-13 80.1 69 59.4
Oeu037059.1 Olea europaea HOM05D004805 ORTHO05D005756 3.5e-13 79.7 66 59.1
Cre14.g626950 Chlamydomonas reinhardtii HOM05D004805 ORTHO05D005756 1.0e-12 78.2 110 37.3
FAN16G1285 Fragaria x ananassa HOM05D004805 ORTHO05D005756 9.8e-08 61.6 44 68.2
SEGI_37983 Sequoiadendron giganteum HOM05D004805 ORTHO05D005756 1.7e-07 60.8 82 36.6
FAN14G1154 Fragaria x ananassa HOM05D004805 ORTHO05D005756 8.3e-07 58.5 80 41.2


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