Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy4G03072 Aquilegia oxysepala HOM05D006681 ORTHO05D008338 5.2e-187 657.5 322 100.0
Thecc.09G329700 Theobroma cacao HOM05D006681 ORTHO05D008338 1.9e-120 436.4 285 72.6
Nn2g10531 Nelumbo nucifera HOM05D006681 ORTHO05D008338 4.6e-119 431.8 282 71.6
PSO339G5789 Papaver somniferum HOM05D006681 ORTHO05D008338 7.9e-119 431.0 301 68.4
CiPaw.13G101600 Carya illinoinensis HOM05D006681 ORTHO05D008338 1.3e-118 430.3 299 70.2
QL01p034239 Quercus lobata HOM05D006681 ORTHO05D008338 1.8e-118 429.9 293 70.6
Duzib170G0311 Durio zibethinus HOM05D006681 ORTHO05D008338 3.9e-118 428.7 303 68.0
TAR633G1649 Trochodendron aralioides HOM05D006681 ORTHO05D008338 1.5e-117 426.8 282 71.6
PSO384G0101 Papaver somniferum HOM05D006681 ORTHO05D008338 5.7e-117 424.9 301 67.8
Cfa011429 Carpinus fangiana HOM05D006681 ORTHO05D008338 7.4e-117 424.5 301 69.4
Gohir.A05G098700 Gossypium hirsutum HOM05D006681 ORTHO05D008338 7.4e-117 424.5 285 70.2
Gorai.009G102400 Gossypium raimondii HOM05D006681 ORTHO05D008338 7.4e-117 424.5 285 70.2
COL.COLO4_18427 Corchorus olitorius HOM05D006681 ORTHO05D008338 2.2e-116 422.9 283 69.6
Gohir.D05G098750 Gossypium hirsutum HOM05D006681 ORTHO05D008338 2.8e-116 422.5 285 69.8
Atru.chr3.3798 Acer truncatum HOM05D006681 ORTHO05D008338 4.8e-116 421.8 284 68.0
CSS0007914 Camellia sinensis var. sinensis HOM05D006681 ORTHO05D008338 6.3e-116 421.4 304 65.5
RcHm_v2.0_Chr5g0062361 Rosa chinensis HOM05D006681 ORTHO05D008338 4.1e-115 418.7 301 67.1
CSS0025304 Camellia sinensis var. sinensis HOM05D006681 ORTHO05D008338 9.0e-115 417.5 304 65.1
FAN16G0358 Fragaria x ananassa HOM05D006681 ORTHO05D008338 1.2e-114 417.2 296 67.2
MBI14_g35939_MAGBIO Magnolia biondii HOM05D006681 ORTHO05D008338 1.5e-114 416.8 303 64.7
Ca_19209_v3 Cicer arietinum L. HOM05D006681 ORTHO05D008338 2.0e-114 416.4 302 66.9
FAN11G3596 Fragaria x ananassa HOM05D006681 ORTHO05D008338 2.0e-114 416.4 296 67.6
FvH4_3g34680 Fragaria vesca HOM05D006681 ORTHO05D008338 2.6e-114 416.0 296 67.6
GSVIVG01025054001 Vitis vinifera HOM05D006681 ORTHO05D008338 3.8e-113 412.1 292 65.8
TPR.G3006 Trifolium pratense HOM05D006681 ORTHO05D008338 6.5e-113 411.4 290 69.3
Potri.009G026700 Populus trichocarpa HOM05D006681 ORTHO05D008338 1.9e-112 409.8 284 68.3
arahy.Tifrunner.gnm1.ann1.SK7GFS Arachis hypogaea HOM05D006681 ORTHO05D008338 3.2e-112 409.1 301 66.1
Lj3g0002575 Lotus japonicus HOM05D006681 ORTHO05D008338 3.2e-112 409.1 286 68.5
Sabra09G0017800 Salix brachista HOM05D006681 ORTHO05D008338 1.2e-111 407.1 284 67.3
CANSAT54G2145 Cannabis sativa HOM05D006681 ORTHO05D008338 1.6e-111 406.8 290 65.9
MD11G1116600 Malus domestica HOM05D006681 ORTHO05D008338 1.6e-111 406.8 282 68.1
Lalb_Chr03g0026931 Lupinus albus HOM05D006681 ORTHO05D008338 3.6e-111 405.6 281 70.1
arahy.Tifrunner.gnm1.ann1.FZI6FG Arachis hypogaea HOM05D006681 ORTHO05D008338 4.6e-111 405.2 301 65.4
Ciclev10028948m.g Citrus clementina HOM05D006681 ORTHO05D008338 3.0e-110 402.5 284 68.3
Medtr4g062130 Medicago truncatula HOM05D006681 ORTHO05D008338 5.1e-110 401.7 302 65.9
FAN21G0481 Fragaria x ananassa HOM05D006681 ORTHO05D008338 8.8e-110 401.0 316 62.0
Sed0010670 Sechium edule HOM05D006681 ORTHO05D008338 1.1e-109 400.6 287 66.6
Prupe.6G086900 Prunus persica HOM05D006681 ORTHO05D008338 2.0e-109 399.8 291 64.9
THA.LOC104814870 Tarenaya hassleriana HOM05D006681 ORTHO05D008338 2.5e-109 399.4 282 66.7
Psat7g220640 Pisum sativum HOM05D006681 ORTHO05D008338 3.3e-109 399.1 302 65.9
Sopen11g030630 Solanum pennellii HOM05D006681 ORTHO05D008338 4.3e-109 398.7 282 66.0
Cc01_g12140 Coffea canephora HOM05D006681 ORTHO05D008338 5.7e-109 398.3 283 66.4
HPP92_006593 Vanilla planifolia HOM05D006681 ORTHO05D008338 7.4e-109 397.9 288 63.2
VMungo1127G1059 Vigna mungo HOM05D006681 ORTHO05D008338 7.4e-109 397.9 268 70.9
TWI31G0387 Tripterygium wilfordii HOM05D006681 ORTHO05D008338 9.7e-109 397.5 302 64.2
ECA236G1321 Erigeron canadensis HOM05D006681 ORTHO05D008338 1.3e-108 397.1 284 65.8
Solyc11g072970.2 Solanum lycopersicum HOM05D006681 ORTHO05D008338 1.7e-108 396.7 282 66.0
PGSC0003DMG400015551 Solanum tuberosum HOM05D006681 ORTHO05D008338 3.7e-108 395.6 284 65.1
PGR119G1802 Punica granatum HOM05D006681 ORTHO05D008338 4.8e-108 395.2 319 63.0
Phvul.011G069100 Phaseolus vulgaris HOM05D006681 ORTHO05D008338 6.3e-108 394.8 284 67.3
CAN.G1647.1 Capsicum annuum HOM05D006681 ORTHO05D008338 6.9e-107 391.3 282 65.2
HanXRQChr05g0134071 Helianthus annuus HOM05D006681 ORTHO05D008338 1.2e-106 390.6 285 65.6
MSTRG.18607 Avicennia marina HOM05D006681 ORTHO05D008338 1.5e-106 390.2 303 62.4
Peaxi162Scf00411g00068 Petunia axillaris HOM05D006681 ORTHO05D008338 2.0e-106 389.8 282 64.5
CsaV3_6G022080 Cucumis sativus L. HOM05D006681 ORTHO05D008338 1.0e-105 387.5 285 64.6
AL5G24960 Arabidopsis lyrata HOM05D006681 ORTHO05D008338 1.3e-105 387.1 297 63.0
EL10Ac7g15941 Beta vulgaris HOM05D006681 ORTHO05D008338 1.3e-105 387.1 283 65.0
Lsat_1_v5_gn_8_78740 Lactuca sativa HOM05D006681 ORTHO05D008338 2.2e-105 386.3 284 64.4
Eucgr.J02098 Eucalyptus grandis HOM05D006681 ORTHO05D008338 2.9e-105 386.0 294 61.6
AT3G46200 Arabidopsis thaliana HOM05D006681 ORTHO05D008338 3.8e-105 385.6 297 63.0
Migut.D02146 Erythranthe guttata HOM05D006681 ORTHO05D008338 1.1e-104 384.0 283 64.3
Thhalv10002615m.g Eutrema salsugineum HOM05D006681 ORTHO05D008338 1.1e-104 384.0 286 64.0
Carub.0005s1203 Capsella rubella HOM05D006681 ORTHO05D008338 1.4e-104 383.6 289 63.3
Oeu040277.1 Olea europaea HOM05D006681 ORTHO05D008338 1.6e-103 380.2 283 65.0
ClCG02G020630 Citrullus lanatus HOM05D006681 ORTHO05D008338 1.0e-102 377.5 339 56.9
Os05g0117500 Oryza sativa ssp. japonica HOM05D006681 ORTHO05D008338 8.8e-102 374.4 294 60.2
C03p70520 Brassica napus HOM05D006681 ORTHO05D008338 2.6e-101 372.9 284 62.0
BolC3t19336H Brassica oleracea HOM05D006681 ORTHO05D008338 2.6e-101 372.9 284 62.0
DCAR_006014 Daucus carota HOM05D006681 ORTHO05D008338 2.6e-101 372.9 295 61.4
BcaC01g01926 Brassica carinata HOM05D006681 ORTHO05D008338 3.3e-101 372.5 284 61.6
SalBow3G4078 Salvia bowleyana HOM05D006681 ORTHO05D008338 9.7e-101 370.9 302 59.9
AUR62001852 Chenopodium quinoa HOM05D006681 ORTHO05D008338 1.3e-100 370.5 283 63.6
Rhsim13G0088300 Rhododendron simsii HOM05D006681 ORTHO05D008338 2.8e-100 369.4 284 63.7
BraA06t25188Z Brassica rapa HOM05D006681 ORTHO05D008338 2.4e-99 366.3 284 60.9
A06p21000 Brassica napus HOM05D006681 ORTHO05D008338 5.3e-99 365.2 284 60.9
Glyma.12G075000 Glycine max HOM05D006681 ORTHO05D008338 5.3e-99 365.2 293 62.5
Zm00001eb266060 Zea mays HOM05D006681 ORTHO05D008338 9.1e-99 364.4 292 60.3
FAN25G3219 Fragaria x ananassa HOM05D006681 ORTHO05D008338 1.6e-98 363.6 296 61.8
Sp5g15430 Schrenkiella parvula HOM05D006681 ORTHO05D008338 1.6e-98 363.6 281 62.6
Carub.0003s2829 Capsella rubella HOM05D006681 ORTHO05D008338 2.0e-98 363.2 289 60.2
SGA_v2.0_scaffold134G34764 Striga asiatica HOM05D006681 ORTHO05D008338 1.3e-97 360.5 257 66.9
Manes.11G136100 Manihot esculenta HOM05D006681 ORTHO05D008338 3.8e-97 359.0 284 63.0
Nitab4.5_0002684g0160 Nicotiana tabacum HOM05D006681 ORTHO05D008338 1.9e-96 356.7 287 61.7
Aa31LG4G15300 Aethionema arabicum HOM05D006681 ORTHO05D008338 1.6e-95 353.6 360 50.8
Lj1A175T11 Lonicera japonica HOM05D006681 ORTHO05D008338 1.2e-90 337.4 280 60.0
Thhalv10002633m.g Eutrema salsugineum HOM05D006681 ORTHO05D008338 1.3e-89 334.0 286 58.4
Lj3g0011020 Lotus japonicus HOM05D006681 ORTHO05D008338 1.9e-88 330.1 224 68.3
Pp3c11_23040 Physcomitrium patens HOM05D006681 ORTHO05D008338 4.2e-88 328.9 286 54.5
Ah.08g214980 Amaranthus hybridus HOM05D006681 ORTHO05D008338 1.2e-87 327.4 293 55.3
Mapoly0128s0008 Marchantia polymorpha HOM05D006681 ORTHO05D008338 3.6e-87 325.9 299 55.5
vmacro03125 Vaccinium macrocarpon HOM05D006681 ORTHO05D008338 6.1e-87 325.1 286 59.8
Dinv32860 Davidia involucrata HOM05D006681 ORTHO05D008338 3.0e-86 322.8 220 71.4
Duzib168G1095 Durio zibethinus HOM05D006681 ORTHO05D008338 3.4e-85 319.3 283 56.2
SMO367G0798 Selaginella moellendorffii HOM05D006681 ORTHO05D008338 3.4e-85 319.3 279 55.9
AUR62009646 Chenopodium quinoa HOM05D006681 ORTHO05D008338 8.3e-84 314.7 286 55.2
AagrBONN_evm.TU.Sc2ySwM_228.1772 Anthoceros agrestis HOM05D006681 ORTHO05D008338 6.5e-81 305.1 281 53.7
Cpa.g.sc2126.1 Carica papaya HOM05D006681 ORTHO05D008338 6.5e-81 305.1 202 70.3
Nitab4.5_0002684g0190 Nicotiana tabacum HOM05D006681 ORTHO05D008338 1.8e-78 297.0 298 53.4
Nitab4.5_0001953g0020 Nicotiana tabacum HOM05D006681 ORTHO05D008338 2.0e-77 293.5 246 58.1
MELO3C013668.2 Cucumis melo HOM05D006681 ORTHO05D008338 5.7e-77 292.0 257 57.6
Haze_24007 Corylus avellana HOM05D006681 ORTHO05D008338 1.4e-75 287.3 441 40.8
CBR_g415 Chara braunii HOM05D006681 ORTHO05D008338 5.6e-72 275.4 346 43.4
Sc06g0008190 Simmondsia chinensis HOM05D006681 ORTHO05D008338 5.0e-65 252.3 176 65.3
Hund05017 Selenicereus undatus HOM05D006681 ORTHO05D008338 1.7e-60 237.3 284 46.1
AL1G56400 Arabidopsis lyrata HOM05D006681 ORTHO05D008338 8.3e-60 235.0 186 60.8
Nitab4.5_0001953g0050 Nicotiana tabacum HOM05D006681 ORTHO05D008338 1.1e-59 234.6 281 45.6
SEGI_27570 Sequoiadendron giganteum HOM05D006681 ORTHO05D008338 3.3e-56 223.0 196 55.1
ATR0759G055 Amborella trichopoda HOM05D006681 ORTHO05D008338 9.5e-56 221.5 169 60.9
Pp3c11_23047 Physcomitrium patens HOM05D006681 ORTHO05D008338 6.8e-54 215.3 173 57.8
Nitab4.5_0000766g0030 Nicotiana tabacum HOM05D006681 ORTHO05D008338 2.7e-34 150.2 143 55.9
Glyma.11G145018 Glycine max HOM05D006681 ORTHO05D008338 1.5e-32 144.4 115 60.9
Sc06g0008200 Simmondsia chinensis HOM05D006681 ORTHO05D008338 5.3e-30 136.0 107 60.7
CAN.G1289.2 Capsicum annuum HOM05D006681 ORTHO05D008338 7.6e-29 132.1 208 39.4
PRCOL_00001211 Prasinoderma coloniale HOM05D006681 ORTHO05D008338 2.9e-28 130.2 439 23.7
MCO11G760 Micromonas commoda HOM05D006681 ORTHO05D008338 4.3e-24 116.3 247 28.3
MD03G1102800 Malus domestica HOM05D006681 ORTHO05D008338 3.2e-19 100.1 71 67.6
CDE08G1356 Ceratophyllum demersum HOM05D006681 ORTHO05D008338 1.3e-15 88.2 65 60.0
Actinidia20468 Actinidia chinensis HOM05D006681 ORTHO05D008338 1.3e-12 78.2 80 52.5
Nitab4.5_0001068g0110 Nicotiana tabacum HOM05D006681 ORTHO05D008338 1.6e-10 71.2 52 65.4


User provided reference genes

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