Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy4G03011 Aquilegia oxysepala HOM05D005594 ORTHO05D006403 1.9e-37 158.7 81 100.0
Aqoxy5G01356 Aquilegia oxysepala HOM05D005594 ORTHO05D006403 5.2e-19 97.4 72 75.0
Aqoxy4G03015 Aquilegia oxysepala HOM05D000111 ORTHO05D007071 8.6e-14 80.1 45 88.9
GSVIVG01009200001 Vitis vinifera HOM05D005594 ORTHO05D006403 1.1e-11 73.2 72 54.2
CiPaw.07G163500 Carya illinoinensis HOM05D005594 ORTHO05D006403 2.3e-11 72.0 72 52.8
CiPaw.01G111900 Carya illinoinensis HOM05D005594 ORTHO05D006403 3.1e-11 71.6 70 54.3
TAR381G1609 Trochodendron aralioides HOM05D005594 ORTHO05D006403 2.0e-10 68.9 72 50.0
TWI31G0793 Tripterygium wilfordii HOM05D005594 ORTHO05D006403 2.6e-10 68.6 68 55.9
GSVIVG01026918001 Vitis vinifera HOM05D005594 ORTHO05D006403 3.4e-10 68.2 63 57.1
Nn1g05624 Nelumbo nucifera HOM05D005594 ORTHO05D006403 4.4e-10 67.8 72 54.2
Nitab4.5_0009755g0010 Nicotiana tabacum HOM05D005594 ORTHO05D006403 4.4e-10 67.8 61 59.0
Haze_22483 Corylus avellana HOM05D005594 ORTHO05D006403 5.8e-10 67.4 73 52.1
Prupe.1G535400 Prunus persica HOM05D005594 ORTHO05D006403 5.8e-10 67.4 70 54.3
QL09p018366 Quercus lobata HOM05D005594 ORTHO05D006403 9.9e-10 66.6 52 63.5
QL12p040902 Quercus lobata HOM05D005594 ORTHO05D006403 9.9e-10 66.6 52 63.5
Nitab4.5_0000131g0040 Nicotiana tabacum HOM05D005594 ORTHO05D006403 1.3e-09 66.2 61 57.4
TAR625G0360 Trochodendron aralioides HOM05D005594 ORTHO05D006403 1.3e-09 66.2 68 52.9
Oeu040880.1 Olea europaea HOM05D005594 ORTHO05D006403 2.2e-09 65.5 52 63.5
unitig_26.g9553 Utricularia gibba HOM05D005594 ORTHO05D006403 2.2e-09 65.5 72 51.4
CANSAT35G1072 Cannabis sativa HOM05D005594 ORTHO05D006403 2.9e-09 65.1 62 59.7
CSS0014517 Camellia sinensis var. sinensis HOM05D005594 ORTHO05D006403 3.7e-09 64.7 62 58.1
CSS0029582 Camellia sinensis var. sinensis HOM05D005594 ORTHO05D006403 3.7e-09 64.7 62 58.1
MD08G1202600 Malus domestica HOM05D005594 ORTHO05D006403 3.7e-09 64.7 71 50.7
HPP92_001778 Vanilla planifolia HOM05D005594 ORTHO05D006403 4.9e-09 64.3 70 51.4
COL.COLO4_35271 Corchorus olitorius HOM05D005594 ORTHO05D006403 6.4e-09 63.9 62 56.5
Nitab4.5_0005345g0030 Nicotiana tabacum HOM05D005594 ORTHO05D006403 6.4e-09 63.9 61 55.7
Eucgr.F02158 Eucalyptus grandis HOM05D005594 ORTHO05D006403 1.1e-08 63.2 73 49.3
Manes.18G056600 Manihot esculenta HOM05D005594 ORTHO05D006403 1.1e-08 63.2 67 53.7
Oeu034716.2 Olea europaea HOM05D005594 ORTHO05D006403 1.1e-08 63.2 48 64.6
Potri.005G152200 Populus trichocarpa HOM05D005594 ORTHO05D006403 1.1e-08 63.2 59 57.6
MBI16_g06011_MAGBIO Magnolia biondii HOM05D005594 ORTHO05D006403 1.4e-08 62.8 72 48.6
MD08G1202000 Malus domestica HOM05D005594 ORTHO05D006403 1.4e-08 62.8 71 49.3
Sed0005434 Sechium edule HOM05D005594 ORTHO05D006403 2.4e-08 62.0 70 50.0
Thecc.08G073300 Theobroma cacao HOM05D005594 ORTHO05D006403 2.4e-08 62.0 61 55.7
Glyma.06G098500 Glycine max HOM05D005594 ORTHO05D006403 3.2e-08 61.6 70 51.4
Ciclev10001834m.g Citrus clementina HOM05D005594 ORTHO05D006403 4.1e-08 61.2 62 53.2
Gohir.D05G221400 Gossypium hirsutum HOM05D005594 ORTHO05D006403 4.1e-08 61.2 73 49.3
Gorai.009G228600 Gossypium raimondii HOM05D005594 ORTHO05D006403 4.1e-08 61.2 73 49.3
Sc15g0003090 Simmondsia chinensis HOM05D005594 ORTHO05D006403 4.1e-08 61.2 49 63.3
Atru.chr13.987 Acer truncatum HOM05D005594 ORTHO05D006403 7.1e-08 60.5 65 53.8
Duzib093G1195 Durio zibethinus HOM05D005594 ORTHO05D006403 7.1e-08 60.5 62 53.2
MD15G1388800 Malus domestica HOM05D005594 ORTHO05D006403 7.1e-08 60.5 71 50.7
Dinv42597 Davidia involucrata HOM05D005594 ORTHO05D006403 9.2e-08 60.1 69 49.3
Sabra05G0119000 Salix brachista HOM05D005594 ORTHO05D006403 9.2e-08 60.1 58 55.2
PGSC0003DMG400008701 Solanum tuberosum HOM05D005594 ORTHO05D006403 9.2e-08 60.1 59 54.2
SGA_v2.0_scaffold62G21352 Striga asiatica HOM05D000582 ORTHO05D006403 9.2e-08 60.1 41 70.7
Lalb_Chr23g0269971 Lupinus albus HOM05D005594 ORTHO05D006403 1.2e-07 59.7 72 52.8
Solyc04g076560.3 Solanum lycopersicum HOM05D005594 ORTHO05D006403 1.2e-07 59.7 56 55.4
Sopen04g030280 Solanum pennellii HOM05D005594 ORTHO05D006403 1.2e-07 59.7 56 55.4
Actinidia19620 Actinidia chinensis HOM05D005594 ORTHO05D006403 1.6e-07 59.3 72 47.2
Ah.07g203840 Amaranthus hybridus HOM05D005594 ORTHO05D006403 2.1e-07 58.9 74 51.4
Gohir.A05G218700 Gossypium hirsutum HOM05D005594 ORTHO05D006403 2.1e-07 58.9 73 49.3
EL10Ac1g00491 Beta vulgaris HOM05D005594 ORTHO05D006403 2.7e-07 58.5 77 49.4
Glyma.04G096700 Glycine max HOM05D005594 ORTHO05D006403 2.7e-07 58.5 59 54.2
Lj8A490G28 Lonicera japonica HOM05D005594 ORTHO05D006403 6.0e-07 57.4 72 45.8
Lj8A496G24 Lonicera japonica HOM05D005594 ORTHO05D006403 6.0e-07 57.4 72 45.8
PSO675G6381 Papaver somniferum HOM05D005594 ORTHO05D006403 6.0e-07 57.4 65 49.2
SGA_v2.0_scaffold13G06499 Striga asiatica HOM05D005594 ORTHO05D006403 6.0e-07 57.4 61 55.7
vmacro21357 Vaccinium macrocarpon HOM05D005594 ORTHO05D006403 6.0e-07 57.4 75 49.3
CAN.G193.4 Capsicum annuum HOM05D005594 ORTHO05D006403 1.0e-06 56.6 51 56.9
Peaxi162Scf01112g00131 Petunia axillaris HOM05D005594 ORTHO05D006403 1.0e-06 56.6 72 48.6
Phvul.009G035100 Phaseolus vulgaris HOM05D005594 ORTHO05D006403 1.0e-06 56.6 71 47.9
PGR042G0833 Punica granatum HOM05D005594 ORTHO05D006403 1.0e-06 56.6 67 47.8
THA.LOC104800630 Tarenaya hassleriana HOM05D005594 ORTHO05D006403 1.0e-06 56.6 42 66.7
DCAR_028088 Daucus carota HOM05D005594 ORTHO05D006403 1.3e-06 56.2 69 46.4
PSO541G2296 Papaver somniferum HOM05D005594 ORTHO05D006403 1.3e-06 56.2 65 52.3
VMungo1309G0327 Vigna mungo HOM05D005594 ORTHO05D006403 1.3e-06 56.2 73 45.2
CsaV3_3G048080 Cucumis sativus L. HOM05D005594 ORTHO05D006403 1.7e-06 55.8 77 45.5
Lj4g0023762 Lotus japonicus HOM05D005594 ORTHO05D006403 1.7e-06 55.8 67 49.3
PSO170G0052 Papaver somniferum HOM05D005594 ORTHO05D006403 1.7e-06 55.8 64 53.1
MELO3C003509.2 Cucumis melo HOM05D005594 ORTHO05D006403 3.0e-06 55.1 73 46.6
FvH4_5g34380 Fragaria vesca HOM05D005594 ORTHO05D006403 3.9e-06 54.7 59 50.8
FAN18G0194 Fragaria x ananassa HOM05D005594 ORTHO05D006403 3.9e-06 54.7 59 50.8
arahy.Tifrunner.gnm1.ann1.7TC8PB Arachis hypogaea HOM05D005594 ORTHO05D006403 5.1e-06 54.3 67 44.8
arahy.Tifrunner.gnm1.ann1.X1J0TB Arachis hypogaea HOM05D005594 ORTHO05D006403 5.1e-06 54.3 67 44.8
FAN08G3514 Fragaria x ananassa HOM05D005594 ORTHO05D006403 5.1e-06 54.3 64 50.0
SEGI_07360 Sequoiadendron giganteum HOM05D005594 ORTHO05D006403 5.1e-06 54.3 72 45.8
Cpa.g.sc1556.4 Carica papaya HOM05D005594 ORTHO05D006403 6.6e-06 53.9 74 48.6
CDE02G1340 Ceratophyllum demersum HOM05D005594 ORTHO05D006403 8.6e-06 53.5 72 41.7
Cc10_g08520 Coffea canephora HOM05D005594 ORTHO05D006403 8.6e-06 53.5 72 44.4
Lj1g0021697 Lotus japonicus HOM05D005594 ORTHO05D006403 8.6e-06 53.5 72 45.8
Medtr3g099850 Medicago truncatula HOM05D005594 ORTHO05D006403 8.6e-06 53.5 73 43.8
Hund26823 Selenicereus undatus HOM05D005594 ORTHO05D006403 8.6e-06 53.5 78 44.9


User provided reference genes

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