Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy4G03008 Aquilegia oxysepala HOM05D001081 ORTHO05D007101 9.6e-68 260.0 128 100.0
Aqoxy3G01434 Aquilegia oxysepala HOM05D001081 ORTHO05D007101 1.3e-64 249.6 128 93.8
TAR625G0271 Trochodendron aralioides HOM05D001081 ORTHO05D007101 1.2e-62 243.0 126 92.1
Nn6g34886 Nelumbo nucifera HOM05D001081 ORTHO05D007101 5.6e-60 234.2 126 87.3
Nn3g16671 Nelumbo nucifera HOM05D001081 ORTHO05D007101 7.4e-60 233.8 126 88.1
ECA238G0006 Erigeron canadensis HOM05D001081 ORTHO05D007101 2.4e-58 228.8 127 85.0
GSVIVG01009969001 Vitis vinifera HOM05D001081 ORTHO05D007101 3.1e-58 228.4 125 85.6
AUR62023429 Chenopodium quinoa HOM05D001081 ORTHO05D007101 9.0e-58 226.9 126 84.9
AUR62018052 Chenopodium quinoa HOM05D001081 ORTHO05D007101 2.0e-57 225.7 126 84.1
Haze_00208 Corylus avellana HOM05D001081 ORTHO05D004708 2.0e-57 225.7 124 85.5
Cfa016232 Carpinus fangiana HOM05D001081 ORTHO05D007101 2.6e-57 225.3 124 85.5
Eucgr.F01156 Eucalyptus grandis HOM05D001081 ORTHO05D007101 3.4e-57 224.9 126 84.1
QL09p008866 Quercus lobata HOM05D001081 ORTHO05D007101 3.4e-57 224.9 124 85.5
QL09p009112 Quercus lobata HOM05D001081 ORTHO05D007101 3.4e-57 224.9 124 85.5
Ciclev10022846m.g Citrus clementina HOM05D001081 ORTHO05D007101 7.6e-57 223.8 124 84.7
FAN10G3364 Fragaria x ananassa HOM05D001081 ORTHO05D007101 1.0e-56 223.4 124 85.5
FAN10G4231 Fragaria x ananassa HOM05D001081 ORTHO05D007101 1.0e-56 223.4 124 85.5
Lj4P697T30 Lonicera japonica HOM05D001081 ORTHO05D007101 1.3e-56 223.0 127 81.1
CDE05G3015 Ceratophyllum demersum HOM05D001081 ORTHO05D007101 1.7e-56 222.6 126 82.5
PSO541G4732 Papaver somniferum HOM05D001081 ORTHO05D007101 1.7e-56 222.6 126 84.1
PSO675G3624 Papaver somniferum HOM05D001081 ORTHO05D007101 1.7e-56 222.6 126 84.1
TAR381G1700 Trochodendron aralioides HOM05D001081 ORTHO05D007101 1.7e-56 222.6 126 84.1
Ah.05g173160 Amaranthus hybridus HOM05D001081 ORTHO05D007101 2.2e-56 222.2 124 84.7
RcHm_v2.0_Chr1g0380551 Rosa chinensis HOM05D001081 ORTHO05D007101 2.2e-56 222.2 124 83.9
PGSC0003DMG401028646 Solanum tuberosum HOM05D001081 ORTHO05D007101 2.9e-56 221.9 126 83.3
PGSC0003DMG402028646 Solanum tuberosum HOM05D001081 ORTHO05D007101 2.9e-56 221.9 126 83.3
CiPaw.06G046200 Carya illinoinensis HOM05D001081 ORTHO05D007101 3.8e-56 221.5 124 83.9
FvH4_7g31560 Fragaria vesca HOM05D001081 ORTHO05D007101 3.8e-56 221.5 124 84.7
FAN06G0656 Fragaria x ananassa HOM05D001081 ORTHO05D007101 3.8e-56 221.5 124 84.7
Sc13g0009920 Simmondsia chinensis HOM05D001081 ORTHO05D007101 3.8e-56 221.5 126 84.1
PGR083G2221 Punica granatum HOM05D001081 ORTHO05D007101 4.9e-56 221.1 126 83.3
CANSAT21G1508 Cannabis sativa HOM05D001081 ORTHO05D007101 6.5e-56 220.7 124 85.5
HanXRQChr14g0429651 Helianthus annuus HOM05D001081 ORTHO05D007101 6.5e-56 220.7 127 80.3
CAN.G411.51 Capsicum annuum HOM05D001081 ORTHO05D007101 1.1e-55 219.9 127 80.3
Atru.chr12.2201 Acer truncatum HOM05D001081 ORTHO05D007101 1.9e-55 219.2 125 81.6
Cpa.g.sc3.88 Carica papaya HOM05D001081 ORTHO05D007101 1.9e-55 219.2 124 82.3
Duzib205G0894 Durio zibethinus HOM05D001081 ORTHO05D007101 1.9e-55 219.2 124 83.9
vmacro12512 Vaccinium macrocarpon HOM05D001081 ORTHO05D007101 1.9e-55 219.2 127 80.3
Duzib068G1165 Durio zibethinus HOM05D001081 ORTHO05D007101 2.5e-55 218.8 124 83.9
FAN06G3917 Fragaria x ananassa HOM05D001081 ORTHO05D007101 2.5e-55 218.8 124 83.9
Ah.03g146510 Amaranthus hybridus HOM05D001081 ORTHO05D007101 3.2e-55 218.4 124 83.1
Cc10_g01340 Coffea canephora HOM05D001081 ORTHO05D007101 3.2e-55 218.4 128 82.8
Lsat_1_v5_gn_2_7800 Lactuca sativa HOM05D000015 ORTHO05D002445 3.2e-55 218.4 128 80.5
EL10Ac1g00785 Beta vulgaris HOM05D001081 ORTHO05D007101 5.5e-55 217.6 126 83.3
Lj4g0009093 Lotus japonicus HOM05D001081 ORTHO05D007101 5.5e-55 217.6 124 82.3
Lj5g0017992 Lotus japonicus HOM05D001081 ORTHO05D007101 5.5e-55 217.6 124 82.3
Thecc.03G199300 Theobroma cacao HOM05D001081 ORTHO05D007101 5.5e-55 217.6 124 83.1
Gohir.A05G100100 Gossypium hirsutum HOM05D001081 ORTHO05D007101 7.1e-55 217.2 124 82.3
Hund21005 Selenicereus undatus HOM05D001081 ORTHO05D007101 7.1e-55 217.2 126 80.2
TPR.G9557 Trifolium pratense HOM05D001081 ORTHO05D007101 7.1e-55 217.2 124 82.3
FAN01G2588 Fragaria x ananassa HOM05D001081 ORTHO05D007101 9.3e-55 216.9 124 83.1
Phvul.001G061700 Phaseolus vulgaris HOM05D001081 ORTHO05D007101 1.2e-54 216.5 124 81.5
SGA_v2.0_scaffold19G08564 Striga asiatica HOM05D001081 ORTHO05D007101 1.2e-54 216.5 126 81.7
Sed0012325 Sechium edule HOM05D001081 ORTHO05D007101 1.6e-54 216.1 124 79.8
Psat7g080240 Pisum sativum HOM05D001081 ORTHO05D007101 2.1e-54 215.7 124 81.5
unitig_32.g11232 Utricularia gibba HOM05D001081 ORTHO05D007101 2.1e-54 215.7 127 78.7
Gohir.D05G099900 Gossypium hirsutum HOM05D001081 ORTHO05D007101 2.7e-54 215.3 124 81.5
Gorai.009G103900 Gossypium raimondii HOM05D001081 ORTHO05D007101 2.7e-54 215.3 124 81.5
Glyma.05G143900 Glycine max HOM05D001081 ORTHO05D007101 3.5e-54 214.9 124 79.8
Lalb_Chr13g0294051 Lupinus albus HOM05D001081 ORTHO05D007101 3.5e-54 214.9 124 80.6
Phvul.003G125501 Phaseolus vulgaris HOM05D001081 ORTHO05D007101 3.5e-54 214.9 124 79.8
TWI74G0183 Tripterygium wilfordii HOM05D001081 ORTHO05D007101 3.5e-54 214.9 124 80.6
FAN03G0412 Fragaria x ananassa HOM05D001081 ORTHO05D007101 4.6e-54 214.5 124 83.1
Nitab4.5_0004146g0010 Nicotiana tabacum HOM05D001081 ORTHO05D007101 4.6e-54 214.5 126 82.5
Prupe.2G309800 Prunus persica HOM05D001081 ORTHO05D007101 1.0e-53 213.4 124 79.8
COL.COLO4_16767 Corchorus olitorius HOM05D001081 ORTHO05D007101 1.3e-53 213.0 124 80.6
Peaxi162Scf00071g00017 Petunia axillaris HOM05D001081 ORTHO05D007101 1.3e-53 213.0 126 82.5
Glyma.08G100200 Glycine max HOM05D001081 ORTHO05D007101 2.3e-53 212.2 124 78.2
Ca_18157_v3 Cicer arietinum L. HOM05D001081 ORTHO05D007101 3.0e-53 211.8 124 79.0
Sed0024875 Sechium edule HOM05D001081 ORTHO05D007101 3.0e-53 211.8 124 80.6
SGA_v2.0_scaffold25G11207 Striga asiatica HOM05D001081 ORTHO05D007101 3.0e-53 211.8 126 80.2
VMungo0251G0734 Vigna mungo HOM05D001081 ORTHO05D007101 3.0e-53 211.8 124 79.0
MSTRG.22347 Avicennia marina HOM05D001081 ORTHO05D007101 3.9e-53 211.5 126 80.2
CsaV3_3G019840 Cucumis sativus L. HOM05D001081 ORTHO05D007101 3.9e-53 211.5 118 83.9
vmacro07565 Vaccinium macrocarpon HOM05D001081 ORTHO05D007101 3.9e-53 211.5 127 78.0
MELO3C008496.2 Cucumis melo HOM05D001081 ORTHO05D007101 5.1e-53 211.1 118 83.9
Sopen12g021840 Solanum pennellii HOM05D001081 ORTHO05D007101 5.1e-53 211.1 122 80.3
MBI07_g23667_MAGBIO Magnolia biondii HOM05D001081 ORTHO05D007101 8.7e-53 210.3 129 79.1
Nitab4.5_0004513g0030 Nicotiana tabacum HOM05D001081 ORTHO05D007101 1.1e-52 209.9 126 80.2
MD07G1288300 Malus domestica HOM05D001081 ORTHO05D007101 1.5e-52 209.5 124 76.6
THA.LOC104798899 Tarenaya hassleriana HOM05D001081 ORTHO05D007101 1.5e-52 209.5 124 78.2
SalBow6G0310 Salvia bowleyana HOM05D001081 ORTHO05D007101 2.5e-52 208.8 126 79.4
Sopen12g021900 Solanum pennellii HOM05D001081 ORTHO05D007101 3.3e-52 208.4 122 79.5
Medtr8g079498 Medicago truncatula HOM05D001081 ORTHO05D007101 4.3e-52 208.0 125 79.2
Atru.chr9.478 Acer truncatum HOM05D001081 ORTHO05D007101 5.7e-52 207.6 125 76.8
DCAR_013886 Daucus carota HOM05D001081 ORTHO05D007101 1.3e-51 206.5 127 75.6
Migut.N03179 Erythranthe guttata HOM05D001081 ORTHO05D007101 1.6e-51 206.1 126 78.6
Potri.012G015800 Populus trichocarpa HOM05D001081 ORTHO05D007101 2.1e-51 205.7 124 77.4
Manes.18G126800 Manihot esculenta HOM05D001081 ORTHO05D007101 3.7e-51 204.9 126 77.0
Potri.015G012700 Populus trichocarpa HOM05D001081 ORTHO05D007101 3.7e-51 204.9 124 77.4
THA.LOC104823111 Tarenaya hassleriana HOM05D001081 ORTHO05D007101 3.7e-51 204.9 124 75.8
A01p13390 Brassica napus HOM05D001081 ORTHO05D007101 4.8e-51 204.5 124 77.4
BraA01t01281Z Brassica rapa HOM05D001081 ORTHO05D007101 4.8e-51 204.5 124 77.4
Carub.0007s1934 Capsella rubella HOM05D001081 ORTHO05D007101 6.2e-51 204.1 124 77.4
Thhalv10026223m.g Eutrema salsugineum HOM05D001081 ORTHO05D007101 6.2e-51 204.1 124 77.4
AL7G31700 Arabidopsis lyrata HOM05D001081 ORTHO05D007101 8.2e-51 203.8 124 77.4
Os05g0114600 Oryza sativa ssp. japonica HOM05D001081 ORTHO05D007101 2.4e-50 202.2 125 76.8
AT4G22000 Arabidopsis thaliana HOM05D001081 ORTHO05D007101 3.1e-50 201.8 124 76.6
BcaC09g51172 Brassica carinata HOM05D001081 ORTHO05D007101 3.1e-50 201.8 124 76.6
BcaNung05107 Brassica carinata HOM05D001081 ORTHO05D007101 3.1e-50 201.8 124 76.6
BolC1t01570H Brassica oleracea HOM05D001081 ORTHO05D007101 3.1e-50 201.8 124 76.6
Sp7g20190 Schrenkiella parvula HOM05D001081 ORTHO05D007101 3.1e-50 201.8 124 76.6
Solyc12g042700.3 Solanum lycopersicum HOM05D001081 ORTHO05D007101 3.1e-50 201.8 122 77.0
C01p16100 Brassica napus HOM05D001081 ORTHO05D007101 6.9e-50 200.7 124 75.8
Zm00001eb355650 Zea mays HOM05D001081 ORTHO05D007101 2.6e-49 198.7 125 78.4
CDE11G0170 Ceratophyllum demersum HOM05D001081 ORTHO05D007101 4.5e-49 198.0 126 78.6
Aa31LG6G3950 Aethionema arabicum HOM05D001081 ORTHO05D007101 1.0e-48 196.8 124 74.2
AUR62013725 Chenopodium quinoa HOM05D001081 ORTHO05D007101 1.0e-48 196.8 105 88.6
CARHR228810 Cardamine hirsuta HOM05D001081 ORTHO05D007101 3.8e-48 194.9 125 74.4
HPP92_008968 Vanilla planifolia HOM05D001081 ORTHO05D007101 1.1e-47 193.4 111 78.4
SHI02421 Sapria himalayana HOM05D006156 ORTHO05D007101 3.2e-47 191.8 124 72.6
MSTRG.25269 Avicennia marina HOM05D001081 ORTHO05D007101 4.2e-47 191.4 169 59.8
SEGI_15379 Sequoiadendron giganteum HOM05D001081 ORTHO05D007101 4.1e-42 174.9 128 69.5
ATR1134G096 Amborella trichopoda HOM05D001081 ORTHO05D007101 3.4e-41 171.8 112 73.2
BcaB03g11721 Brassica carinata HOM05D001081 ORTHO05D007101 5.7e-36 154.5 103 74.8
ClCG05G008950 Citrullus lanatus HOM05D001081 ORTHO05D007101 1.7e-35 152.9 84 89.3
Actinidia17007 Actinidia chinensis HOM05D001081 ORTHO05D007101 4.1e-34 148.3 82 78.0
CSS0017659 Camellia sinensis var. sinensis HOM05D001081 ORTHO05D007101 5.3e-34 147.9 82 85.4
Dinv31879 Davidia involucrata HOM05D001081 ORTHO05D007101 5.1e-29 131.3 77 84.4
Solyc12g042720.3 Solanum lycopersicum HOM05D001081 ORTHO05D007101 2.2e-27 125.9 78 79.5
Mapoly0012s0096 Marchantia polymorpha HOM05D001081 ORTHO05D007101 3.1e-26 122.1 103 58.3
SMO356G0374 Selaginella moellendorffii HOM05D001081 ORTHO05D007101 9.1e-26 120.6 88 62.5
Pp3c15_6340 Physcomitrium patens HOM05D001081 ORTHO05D007101 3.5e-25 118.6 89 65.2
Gorai.006G039100 Gossypium raimondii HOM05D001081 ORTHO05D007101 1.2e-22 110.2 124 50.8
CSS0023065 Camellia sinensis var. sinensis HOM05D001081 ORTHO05D007101 2.7e-22 109.0 61 86.9
CSS0034162 Camellia sinensis var. sinensis HOM05D001081 ORTHO05D007101 8.8e-21 104.0 57 89.5
Nitab4.5_0001077g0030 Nicotiana tabacum HOM05D012963 ORTHO05D007101 3.3e-20 102.1 82 56.1
Gohir.A09G033580 Gossypium hirsutum HOM05D001081 ORTHO05D007101 5.7e-20 101.3 64 75.0
Gohir.D09G034100 Gossypium hirsutum HOM05D001081 ORTHO05D007101 1.4e-18 96.7 64 73.4
CBR_g8977 Chara braunii HOM05D001081 ORTHO05D007101 3.2e-15 85.5 81 51.9
arahy.Tifrunner.gnm1.ann1.EUX55C Arachis hypogaea HOM05D001081 ORTHO05D007101 1.6e-14 83.2 48 85.4
Zm00001eb266390 Zea mays HOM05D001081 ORTHO05D007101 1.6e-14 83.2 116 47.4
DCAR_016735 Daucus carota HOM05D001081 ORTHO05D007101 3.5e-09 65.5 59 45.8
Actinidia15449 Actinidia chinensis HOM05D001081 ORTHO05D007101 3.8e-08 62.0 36 72.2
Nitab4.5_0002544g0090 Nicotiana tabacum HOM05D001081 ORTHO05D007101 4.2e-07 58.5 40 65.0


User provided reference genes

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