Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy4G02966 Aquilegia oxysepala HOM05D008555 ORTHO05D010760 0.0e+00 1496.1 783 100.0
Dinv37190 Davidia involucrata HOM05D008555 ORTHO05D010760 7.2e-73 279.6 788 34.0
Cfa017405 Carpinus fangiana HOM05D008555 ORTHO05D010760 3.6e-72 277.3 793 31.4
Nn2g12801 Nelumbo nucifera HOM05D008555 ORTHO05D010760 2.6e-67 261.2 559 35.6
TAR623G0003 Trochodendron aralioides HOM05D008555 ORTHO05D010760 1.3e-66 258.8 629 36.4
GSVIVG01034198001 Vitis vinifera HOM05D008555 ORTHO05D010760 1.6e-64 251.9 603 36.7
QL07p047905 Quercus lobata HOM05D008555 ORTHO05D010760 1.5e-62 245.4 479 37.2
QL07p031190 Quercus lobata HOM05D008555 ORTHO05D010760 2.0e-62 245.0 479 37.0
Haze_20761 Corylus avellana HOM05D008555 ORTHO05D010760 1.2e-59 235.7 963 27.7
MBI05_g06539_MAGBIO Magnolia biondii HOM05D008555 ORTHO05D010760 5.2e-55 220.3 430 39.5
PSO384G5088 Papaver somniferum HOM05D008555 ORTHO05D010760 5.9e-51 206.8 580 33.3
PSO339G2550 Papaver somniferum HOM05D008555 ORTHO05D010760 1.7e-50 205.3 580 32.8
CSS0010375 Camellia sinensis var. sinensis HOM05D008555 ORTHO05D010760 6.5e-50 203.4 775 28.9
HPP92_014313 Vanilla planifolia HOM05D008555 ORTHO05D010760 1.2e-48 199.1 315 39.4
Prupe.6G252400 Prunus persica HOM05D008555 ORTHO05D010760 3.6e-48 197.6 495 33.3
Manes.08G133801 Manihot esculenta HOM05D008555 ORTHO05D010760 6.1e-48 196.8 585 31.3
Thecc.05G042000 Theobroma cacao HOM05D008555 ORTHO05D010760 8.0e-48 196.4 545 33.9
MD04G1125500 Malus domestica HOM05D008555 ORTHO05D010760 1.4e-44 185.7 465 32.3
Migut.J00343 Erythranthe guttata HOM05D008555 ORTHO05D010760 2.7e-43 181.4 425 34.6
Sc20g0004840 Simmondsia chinensis HOM05D008555 ORTHO05D010760 7.7e-43 179.9 301 40.2
Cc06_g02800 Coffea canephora HOM05D008555 ORTHO05D010760 5.0e-42 177.2 187 49.2
Gohir.A09G157300 Gossypium hirsutum HOM05D008555 ORTHO05D010760 7.5e-38 163.3 550 31.6
Gohir.D09G152600 Gossypium hirsutum HOM05D008555 ORTHO05D010760 2.2e-37 161.8 559 30.1
Duzib093G2048 Durio zibethinus HOM05D008555 ORTHO05D010760 2.8e-37 161.4 536 31.3
Lsat_1_v5_gn_8_82700 Lactuca sativa HOM05D008555 ORTHO05D010760 4.8e-37 160.6 472 31.1
SGA_v2.0_scaffold126G33802 Striga asiatica HOM05D008555 ORTHO05D010760 1.1e-36 159.5 404 30.7
Rhsim05G0190300 Rhododendron simsii HOM05D008555 ORTHO05D010760 3.1e-36 157.9 556 29.1
FAN05G3093 Fragaria x ananassa HOM05D008555 ORTHO05D010760 5.4e-36 157.1 231 42.9
FvH4_6g14100 Fragaria vesca HOM05D008555 ORTHO05D010760 9.1e-36 156.4 231 42.9
FAN09G2752 Fragaria x ananassa HOM05D008555 ORTHO05D010760 2.7e-35 154.8 279 38.4
ECA236G1276 Erigeron canadensis HOM05D008555 ORTHO05D010760 7.7e-35 153.3 286 35.7
Hund09315 Selenicereus undatus HOM05D008555 ORTHO05D010760 7.7e-35 153.3 447 31.5
Eucgr.A01250 Eucalyptus grandis HOM05D008555 ORTHO05D010760 3.8e-34 151.0 525 28.8
FAN02G2195 Fragaria x ananassa HOM05D008555 ORTHO05D010760 2.5e-33 148.3 187 44.4
SalBow3G1082 Salvia bowleyana HOM05D008555 ORTHO05D010760 5.5e-33 147.1 462 31.6
HanXRQChr04g0124781 Helianthus annuus HOM05D008555 ORTHO05D010760 6.1e-32 143.7 524 27.7
AUR62042775 Chenopodium quinoa HOM05D008555 ORTHO05D010760 1.0e-31 142.9 593 29.3
AUR62019574 Chenopodium quinoa HOM05D008555 ORTHO05D010760 1.4e-31 142.5 612 29.4
EL10Ac1g01982 Beta vulgaris HOM05D008555 ORTHO05D010760 1.1e-28 132.9 553 27.7
RcHm_v2.0_Chr3g0467001 Rosa chinensis HOM05D008555 ORTHO05D010760 4.1e-28 131.0 208 40.9
Lsat_1_v5_gn_3_51821 Lactuca sativa HOM05D008555 ORTHO05D010760 1.6e-24 119.0 142 43.7
vmacro20136 Vaccinium macrocarpon HOM05D008555 ORTHO05D010760 2.4e-20 105.1 542 27.3
COL.COLO4_14830 Corchorus olitorius HOM05D008555 ORTHO05D010760 1.7e-18 99.0 101 52.5
Gorai.006G174100 Gossypium raimondii HOM05D008555 ORTHO05D010760 1.3e-10 72.8 452 26.1
ATR0751G270 Amborella trichopoda HOM05D003575 ORTHO05D003587 5.2e-07 60.8 167 27.5
Peaxi162Scf00047g02035 Petunia axillaris HOM05D003575 ORTHO05D003587 2.6e-06 58.5 174 26.4
Mapoly0033s0032 Marchantia polymorpha HOM05D003575 ORTHO05D003587 9.9e-06 56.6 117 27.4
Oeu024357.1 Olea europaea HOM05D008555 ORTHO05D010760 9.9e-06 56.6 494 25.1


User provided reference genes

Program Settings