Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy4G02929 Aquilegia oxysepala HOM05D005580 ORTHO05D006395 1.1e-84 316.6 166 100.0
TAR623G0785 Trochodendron aralioides HOM05D005580 ORTHO05D006395 3.3e-52 208.8 141 76.6
Sabra10G0157500 Salix brachista HOM05D005580 ORTHO05D006395 2.4e-47 192.6 127 76.4
Potri.010G203900 Populus trichocarpa HOM05D005580 ORTHO05D006395 4.2e-47 191.8 139 73.4
GSVIVG01016552001 Vitis vinifera HOM05D005580 ORTHO05D006395 7.1e-47 191.0 127 73.2
TAR633G1881 Trochodendron aralioides HOM05D005580 ORTHO05D006395 2.1e-46 189.5 127 73.2
Nn2g11101 Nelumbo nucifera HOM05D005580 ORTHO05D006395 3.5e-46 188.7 126 76.2
Cfa001474 Carpinus fangiana HOM05D005580 ORTHO05D006395 6.0e-46 188.0 136 73.5
CiPaw.02G183900 Carya illinoinensis HOM05D005580 ORTHO05D006395 7.8e-46 187.6 141 70.9
Potri.008G055800 Populus trichocarpa HOM05D005580 ORTHO05D006395 1.0e-45 187.2 139 72.7
Prupe.2G235300 Prunus persica HOM05D005580 ORTHO05D006395 1.0e-45 187.2 127 76.4
Rhsim03G0130700 Rhododendron simsii HOM05D005580 ORTHO05D006395 1.3e-45 186.8 131 73.3
Cc02_g07860 Coffea canephora HOM05D005580 ORTHO05D006395 1.7e-45 186.4 135 71.9
Glyma.18G291400 Glycine max HOM05D005580 ORTHO05D006395 1.7e-45 186.4 127 72.4
Nn2g13341 Nelumbo nucifera HOM05D005580 ORTHO05D006395 1.7e-45 186.4 131 74.0
Sabra08G0040500 Salix brachista HOM05D005580 ORTHO05D006395 1.7e-45 186.4 139 68.3
FAN06G0736 Fragaria x ananassa HOM05D005580 ORTHO05D006395 2.3e-45 186.0 131 72.5
FAN06G1328 Fragaria x ananassa HOM05D005580 ORTHO05D006395 2.3e-45 186.0 131 72.5
Phvul.008G010700 Phaseolus vulgaris HOM05D005580 ORTHO05D006395 3.0e-45 185.7 127 72.4
Thecc.10G042400 Theobroma cacao HOM05D005580 ORTHO05D006395 3.0e-45 185.7 139 74.1
VMungo1383G1027 Vigna mungo HOM05D005580 ORTHO05D006395 3.0e-45 185.7 127 72.4
MD01G1134100 Malus domestica HOM05D005580 ORTHO05D006395 3.9e-45 185.3 127 73.2
Glyma.02G091600 Glycine max HOM05D005580 ORTHO05D006395 5.1e-45 184.9 127 71.7
Duzib128G0371 Durio zibethinus HOM05D005580 ORTHO05D006395 6.6e-45 184.5 128 72.7
FvH4_7g22470 Fragaria vesca HOM05D005580 ORTHO05D006395 8.7e-45 184.1 131 71.8
FAN03G1496 Fragaria x ananassa HOM05D005580 ORTHO05D006395 8.7e-45 184.1 131 71.8
FAN10G2347 Fragaria x ananassa HOM05D005580 ORTHO05D006395 8.7e-45 184.1 131 71.8
Nitab4.5_0013062g0010 Nicotiana tabacum HOM05D005580 ORTHO05D006395 8.7e-45 184.1 127 74.8
RcHm_v2.0_Chr1g0367081 Rosa chinensis HOM05D005580 ORTHO05D006395 1.1e-44 183.7 131 72.5
vmacro07170 Vaccinium macrocarpon HOM05D005580 ORTHO05D006395 1.1e-44 183.7 130 72.3
QL08p059794 Quercus lobata HOM05D005580 ORTHO05D006395 1.5e-44 183.3 145 68.3
CiPaw.01G287400 Carya illinoinensis HOM05D005580 ORTHO05D006395 2.5e-44 182.6 140 70.0
Nitab4.5_0001097g0030 Nicotiana tabacum HOM05D005580 ORTHO05D006395 3.3e-44 182.2 127 74.0
Duzib106G1822 Durio zibethinus HOM05D005580 ORTHO05D006395 4.3e-44 181.8 129 71.3
Manes.07G116200 Manihot esculenta HOM05D005580 ORTHO05D006395 4.3e-44 181.8 139 64.7
FAN01G0694 Fragaria x ananassa HOM05D005580 ORTHO05D006395 5.6e-44 181.4 127 73.2
FAN01G2215 Fragaria x ananassa HOM05D005580 ORTHO05D006395 5.6e-44 181.4 127 73.2
ClCG09G019730 Citrullus lanatus HOM05D005580 ORTHO05D006395 7.3e-44 181.0 127 72.4
Oeu064380.1 Olea europaea HOM05D005580 ORTHO05D006395 7.3e-44 181.0 130 71.5
MBI05_g22035_MAGBIO Magnolia biondii HOM05D005580 ORTHO05D006395 2.1e-43 179.5 140 72.1
COL.COLO4_15040 Corchorus olitorius HOM05D005580 ORTHO05D006395 3.6e-43 178.7 130 71.5
MD07G1198300 Malus domestica HOM05D005580 ORTHO05D006395 3.6e-43 178.7 127 71.7
Cpa.g.sc1.404 Carica papaya HOM05D005580 ORTHO05D006395 6.2e-43 177.9 128 70.3
MELO3C021630.2 Cucumis melo HOM05D005580 ORTHO05D006395 6.2e-43 177.9 127 70.9
Gohir.A10G218800 Gossypium hirsutum HOM05D005580 ORTHO05D006395 6.2e-43 177.9 127 72.4
Dinv26015 Davidia involucrata HOM05D005580 ORTHO05D006395 8.1e-43 177.6 135 69.6
Sed0002022 Sechium edule HOM05D005580 ORTHO05D006395 1.1e-42 177.2 127 68.5
TWI38G1118 Tripterygium wilfordii HOM05D005580 ORTHO05D006395 1.1e-42 177.2 127 71.7
CSS0041204 Camellia sinensis var. sinensis HOM05D005580 ORTHO05D006395 1.4e-42 176.8 135 70.4
CANSAT56G2481 Cannabis sativa HOM05D005580 ORTHO05D006395 1.4e-42 176.8 128 69.5
Lsat_1_v5_gn_2_119121 Lactuca sativa HOM05D005580 ORTHO05D006395 1.4e-42 176.8 123 74.0
Manes.10G030300 Manihot esculenta HOM05D005580 ORTHO05D006395 1.4e-42 176.8 129 69.0
Gohir.D10G228400 Gossypium hirsutum HOM05D005580 ORTHO05D006395 1.8e-42 176.4 127 71.7
Gorai.011G260800 Gossypium raimondii HOM05D005580 ORTHO05D006395 1.8e-42 176.4 127 71.7
HanXRQChr14g0457951 Helianthus annuus HOM05D005580 ORTHO05D006395 1.8e-42 176.4 123 73.2
Lalb_Chr17g0336141 Lupinus albus HOM05D005580 ORTHO05D006395 1.8e-42 176.4 127 70.9
HPP92_019446 Vanilla planifolia HOM05D005580 ORTHO05D006395 2.4e-42 176.0 126 70.6
Atru.chr12.452 Acer truncatum HOM05D005580 ORTHO05D006395 4.0e-42 175.3 126 69.8
Atru.chr12.474 Acer truncatum HOM05D005580 ORTHO05D006395 4.0e-42 175.3 126 69.8
PGSC0003DMG400023532 Solanum tuberosum HOM05D005580 ORTHO05D006395 6.9e-42 174.5 126 70.6
TWI63G0967 Tripterygium wilfordii HOM05D005580 ORTHO05D006395 9.0e-42 174.1 139 66.9
CsaV3_5G026670 Cucumis sativus L. HOM05D005580 ORTHO05D006395 1.2e-41 173.7 127 70.9
Solyc05g054450.1 Solanum lycopersicum HOM05D005580 ORTHO05D006395 1.2e-41 173.7 126 69.8
Lj1g0024567 Lotus japonicus HOM05D005580 ORTHO05D006395 2.0e-41 172.9 130 67.7
Sed0020308 Sechium edule HOM05D005580 ORTHO05D006395 2.0e-41 172.9 131 68.7
Sopen05g032940 Solanum pennellii HOM05D005580 ORTHO05D006395 2.0e-41 172.9 130 69.2
CANSAT56G4483 Cannabis sativa HOM05D005580 ORTHO05D006395 2.6e-41 172.6 126 66.7
Eucgr.G02934 Eucalyptus grandis HOM05D005580 ORTHO05D006395 2.6e-41 172.6 118 72.9
Gorai.013G022300 Gossypium raimondii HOM05D005580 ORTHO05D006395 2.6e-41 172.6 130 70.8
THA.LOC104810028 Tarenaya hassleriana HOM05D005580 ORTHO05D006395 2.6e-41 172.6 129 68.2
Gohir.A13G019300 Gossypium hirsutum HOM05D005580 ORTHO05D006395 3.4e-41 172.2 130 70.0
DCAR_011695 Daucus carota HOM05D005580 ORTHO05D006395 4.5e-41 171.8 128 71.1
TPR.G23775 Trifolium pratense HOM05D005580 ORTHO05D006395 4.5e-41 171.8 127 66.9
Ca_26455_v3 Cicer arietinum L. HOM05D005580 ORTHO05D006395 5.8e-41 171.4 127 66.9
Lsat_1_v5_gn_8_15580 Lactuca sativa HOM05D005580 ORTHO05D006395 5.8e-41 171.4 120 73.3
Psat3g161760 Pisum sativum HOM05D005580 ORTHO05D006395 1.3e-40 170.2 127 66.9
PSO151G0057 Papaver somniferum HOM05D005580 ORTHO05D006395 2.2e-40 169.5 114 75.4
PSO339G6083 Papaver somniferum HOM05D005580 ORTHO05D006395 2.2e-40 169.5 114 75.4
SalBow6G2402 Salvia bowleyana HOM05D005580 ORTHO05D006395 2.2e-40 169.5 127 67.7
DCAR_027619 Daucus carota HOM05D005580 ORTHO05D006395 3.8e-40 168.7 131 67.2
Gohir.D13G019900 Gossypium hirsutum HOM05D005580 ORTHO05D006395 3.8e-40 168.7 130 70.0
Medtr7g026320 Medicago truncatula HOM05D005580 ORTHO05D006395 3.8e-40 168.7 127 66.1
Peaxi162Scf00886g00003 Petunia axillaris HOM05D005580 ORTHO05D006395 4.9e-40 168.3 121 71.1
PGR142G3643 Punica granatum HOM05D005580 ORTHO05D006395 4.9e-40 168.3 136 64.7
ECA238G1104 Erigeron canadensis HOM05D005580 ORTHO05D006395 7.1e-39 164.5 119 70.6
PSO339G4490 Papaver somniferum HOM05D005580 ORTHO05D006395 7.1e-39 164.5 121 69.4
Lalb_Chr10g0091641 Lupinus albus HOM05D005580 ORTHO05D006395 1.2e-38 163.7 127 67.7
PSO384G2205 Papaver somniferum HOM05D005580 ORTHO05D006395 1.6e-38 163.3 121 68.6
HanXRQChr02g0037481 Helianthus annuus HOM05D005580 ORTHO05D006395 2.7e-38 162.5 121 68.6
MSTRG.8252 Avicennia marina HOM05D005580 ORTHO05D006395 4.6e-38 161.8 127 66.1
Os05g0459300 Oryza sativa ssp. japonica HOM05D005580 ORTHO05D006395 2.3e-37 159.5 114 69.3
Thhalv10010708m.g Eutrema salsugineum HOM05D005580 ORTHO05D006395 5.1e-37 158.3 125 64.8
Lj8C84T10 Lonicera japonica HOM05D005580 ORTHO05D006395 5.1e-37 158.3 130 65.4
MELO3C023848.2 Cucumis melo HOM05D005580 ORTHO05D006395 6.7e-37 157.9 132 62.9
AL5G36570 Arabidopsis lyrata HOM05D005580 ORTHO05D006395 8.7e-37 157.5 123 65.9
CARHR165440 Cardamine hirsuta HOM05D005580 ORTHO05D006395 1.1e-36 157.1 123 65.9
Aa31LG10G10450 Aethionema arabicum HOM05D005580 ORTHO05D006395 1.5e-36 156.8 123 65.9
Dinv03047 Davidia involucrata HOM05D005580 ORTHO05D006395 1.5e-36 156.8 126 67.5
Carub.0005s2214 Capsella rubella HOM05D005580 ORTHO05D006395 1.9e-36 156.4 122 67.2
Sp5g07050 Schrenkiella parvula HOM05D005580 ORTHO05D006395 3.3e-36 155.6 125 64.8
ClCG07G003270 Citrullus lanatus HOM05D005580 ORTHO05D006395 4.3e-36 155.2 135 60.7
CsaV3_5G008020 Cucumis sativus L. HOM05D005580 ORTHO05D006395 4.3e-36 155.2 131 61.8
AT3G55420 Arabidopsis thaliana HOM05D005580 ORTHO05D006395 9.6e-36 154.1 123 65.0
THA.LOC104807715 Tarenaya hassleriana HOM05D005580 ORTHO05D006395 9.6e-36 154.1 145 59.3
BcaC02g09755 Brassica carinata HOM05D005580 ORTHO05D006395 2.8e-35 152.5 125 64.8
C04p36960 Brassica napus HOM05D005580 ORTHO05D006395 2.8e-35 152.5 125 64.8
BolC4t25261H Brassica oleracea HOM05D005580 ORTHO05D006395 2.8e-35 152.5 125 64.8
THA.LOC104824274 Tarenaya hassleriana HOM05D005580 ORTHO05D006395 3.7e-35 152.1 132 61.4
BolC8t50680H Brassica oleracea HOM05D005580 ORTHO05D006395 6.2e-35 151.4 127 63.8
BraA04t16163Z Brassica rapa HOM05D005580 ORTHO05D006395 6.2e-35 151.4 125 64.0
BcaB02g08423 Brassica carinata HOM05D005580 ORTHO05D006395 8.1e-35 151.0 125 64.8
A09p48340 Brassica napus HOM05D005580 ORTHO05D006395 8.1e-35 151.0 127 62.2
BraA09t40286Z Brassica rapa HOM05D005580 ORTHO05D006395 8.1e-35 151.0 127 62.2
BcaC07g39844 Brassica carinata HOM05D005580 ORTHO05D006395 1.4e-34 150.2 127 62.2
C08p30460 Brassica napus HOM05D005580 ORTHO05D006395 1.4e-34 150.2 127 62.2
C08p30630 Brassica napus HOM05D005580 ORTHO05D006395 3.1e-34 149.1 127 61.4
unitig_8.g3317 Utricularia gibba HOM05D005580 ORTHO05D006395 4.0e-34 148.7 140 57.1
Sed0012553 Sechium edule HOM05D005580 ORTHO05D006395 5.3e-34 148.3 118 64.4
ATR0559G355 Amborella trichopoda HOM05D005580 ORTHO05D006395 6.9e-34 147.9 118 61.9
A04p04530 Brassica napus HOM05D005580 ORTHO05D006395 6.9e-34 147.9 125 63.2
BcaB01g00102 Brassica carinata HOM05D005580 ORTHO05D006395 9.0e-34 147.5 128 61.7
CDE02G1824 Ceratophyllum demersum HOM05D005580 ORTHO05D006395 2.0e-33 146.4 114 69.3
Sc10g0001550 Simmondsia chinensis HOM05D005580 ORTHO05D006395 7.6e-33 144.4 118 62.7
AUR62012083 Chenopodium quinoa HOM05D005580 ORTHO05D006395 1.7e-32 143.3 117 64.1
CDE08G0377 Ceratophyllum demersum HOM05D005580 ORTHO05D006395 1.4e-31 140.2 114 66.7
Ah.16g102300 Amaranthus hybridus HOM05D005580 ORTHO05D006395 3.2e-31 139.0 125 58.4
SEGI_33908 Sequoiadendron giganteum HOM05D005580 ORTHO05D006395 3.2e-31 139.0 117 58.1
BcaC07g39859 Brassica carinata HOM05D005580 ORTHO05D006395 7.4e-28 127.9 126 57.1
Os12g0571300 Oryza sativa ssp. japonica HOM05D005580 ORTHO05D006395 6.9e-26 121.3 112 53.6
Lj1P937T48 Lonicera japonica HOM05D005580 ORTHO05D006395 8.4e-24 114.4 60 86.7
Cc05_g01760 Coffea canephora HOM05D005580 ORTHO05D006395 1.0e-21 107.5 149 45.6
AUR62039380 Chenopodium quinoa HOM05D000020 ORTHO05D001617 1.9e-20 103.2 92 58.7
Actinidia02948 Actinidia chinensis HOM05D005580 ORTHO05D006395 6.9e-18 94.7 133 47.4
Ciclev10032947m.g Citrus clementina HOM05D005580 ORTHO05D006395 5.7e-12 75.1 39 87.2
SEGI_21732 Sequoiadendron giganteum HOM05D003049 ORTHO05D003531 1.2e-06 57.4 40 67.5
SGA_v2.0_scaffold2G01004 Striga asiatica HOM05D005580 ORTHO05D006395 1.6e-06 57.0 38 60.5


User provided reference genes

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