Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy4G02880 Aquilegia oxysepala HOM05D007994 ORTHO05D010092 2.1e-157 558.9 274 100.0
TAR623G0693 Trochodendron aralioides HOM05D007994 ORTHO05D010092 1.8e-95 353.2 270 64.1
Dinv12515 Davidia involucrata HOM05D007994 ORTHO05D010092 3.3e-81 305.8 270 59.3
Cfa010076 Carpinus fangiana HOM05D007994 ORTHO05D010092 7.8e-75 284.6 273 54.2
Duzib168G2077 Durio zibethinus HOM05D007994 ORTHO05D010092 1.0e-74 284.3 268 53.4
Manes.11G158100 Manihot esculenta HOM05D007994 ORTHO05D010092 1.5e-73 280.4 265 54.3
Thecc.09G290600 Theobroma cacao HOM05D007994 ORTHO05D010092 1.9e-73 280.0 268 53.0
PSO384G4503 Papaver somniferum HOM05D007994 ORTHO05D010092 9.5e-73 277.7 244 58.2
COL.COLO4_19306 Corchorus olitorius HOM05D007994 ORTHO05D010092 4.7e-72 275.4 275 50.2
Potri.009G148200 Populus trichocarpa HOM05D007994 ORTHO05D010092 1.1e-71 274.2 271 52.0
Cc01_g09740 Coffea canephora HOM05D007994 ORTHO05D010092 4.0e-71 272.3 275 52.7
Duzib170G0069 Durio zibethinus HOM05D007994 ORTHO05D010092 2.0e-70 270.0 273 52.4
QL01p013577 Quercus lobata HOM05D007994 ORTHO05D010092 2.6e-70 269.6 213 61.0
CiPaw.13G140400 Carya illinoinensis HOM05D007994 ORTHO05D010092 1.3e-69 267.3 281 53.7
Sabra09G0116600 Salix brachista HOM05D007994 ORTHO05D010092 2.9e-69 266.2 263 50.2
Gohir.A09G093700 Gossypium hirsutum HOM05D007994 ORTHO05D010092 3.7e-69 265.8 269 50.9
Haze_23442 Corylus avellana HOM05D007994 ORTHO05D010092 1.9e-68 263.5 242 57.9
TWI75G1300 Tripterygium wilfordii HOM05D007994 ORTHO05D010092 1.6e-67 260.4 263 51.0
Gorai.006G110000 Gossypium raimondii HOM05D007994 ORTHO05D010092 6.0e-67 258.5 244 53.3
ClCG01G012620 Citrullus lanatus HOM05D007994 ORTHO05D010092 5.1e-66 255.4 257 52.5
MSTRG.12356 Avicennia marina HOM05D007994 ORTHO05D010092 3.3e-65 252.7 274 48.2
Gohir.D09G093400 Gossypium hirsutum HOM05D007994 ORTHO05D010092 3.3e-65 252.7 269 49.4
CsaV3_1G014550 Cucumis sativus L. HOM05D007994 ORTHO05D010092 6.2e-64 248.4 257 51.8
MELO3C004786.2 Cucumis melo HOM05D007994 ORTHO05D010092 1.4e-60 237.3 269 48.7
THA.LOC104814803 Tarenaya hassleriana HOM05D007994 ORTHO05D010092 1.6e-59 233.8 268 48.1
Lalb_Chr19g0136731 Lupinus albus HOM05D007994 ORTHO05D010092 5.1e-58 228.8 259 45.9
Atru.chr3.3364 Acer truncatum HOM05D007994 ORTHO05D010092 5.2e-55 218.8 236 50.4
Lj3g0008283 Lotus japonicus HOM05D007994 ORTHO05D010092 2.6e-54 216.5 246 45.5
Glyma.11G188500 Glycine max HOM05D007994 ORTHO05D010092 8.4e-53 211.5 248 45.2
VMungo1080G0008 Vigna mungo HOM05D007994 ORTHO05D010092 1.4e-52 210.7 279 41.2
Phvul.011G091200 Phaseolus vulgaris HOM05D007994 ORTHO05D010092 3.2e-52 209.5 281 42.3
CANSAT54G1189 Cannabis sativa HOM05D007994 ORTHO05D010092 7.1e-52 208.4 271 45.0
MD03G1135900 Malus domestica HOM05D007994 ORTHO05D010092 9.3e-52 208.0 272 43.8
Sed0020093 Sechium edule HOM05D007994 ORTHO05D010092 1.1e-47 194.5 259 42.9
Prupe.6G120200 Prunus persica HOM05D007994 ORTHO05D010092 1.4e-47 194.1 259 44.0
RcHm_v2.0_Chr5g0054991 Rosa chinensis HOM05D007994 ORTHO05D010092 9.3e-44 181.4 259 39.8
FAN16G1405 Fragaria x ananassa HOM05D007994 ORTHO05D010092 2.8e-40 169.9 265 37.4
Eucgr.J00433 Eucalyptus grandis HOM05D007994 ORTHO05D010092 3.0e-34 149.8 137 53.3
PGSC0003DMG400026538 Solanum tuberosum HOM05D007994 ORTHO05D010092 8.7e-34 148.3 271 35.8
PSO339G3278 Papaver somniferum HOM05D007994 ORTHO05D010092 2.5e-33 146.7 96 61.5
FAN11G1628 Fragaria x ananassa HOM05D007994 ORTHO05D010092 5.6e-33 145.6 234 40.2
CSS0019289 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.1e-32 143.7 136 55.9
Nn2g14036 Nelumbo nucifera HOM05D007994 ORTHO05D010092 4.0e-31 139.4 102 60.8
GSVIVG01031390001 Vitis vinifera HOM05D007994 ORTHO05D010092 2.2e-29 133.7 103 58.3
Solyc11g066940.2 Solanum lycopersicum HOM05D007994 ORTHO05D010092 4.9e-29 132.5 269 34.6
Migut.N02511 Erythranthe guttata HOM05D007994 ORTHO05D010092 3.2e-28 129.8 270 34.4
Phvul.005G126500 Phaseolus vulgaris HOM05D007994 ORTHO05D010092 3.5e-27 126.3 123 45.5
vmacro14359 Vaccinium macrocarpon HOM05D007994 ORTHO05D010092 1.0e-26 124.8 97 59.8
SEGI_15329 Sequoiadendron giganteum HOM05D007994 ORTHO05D010092 1.1e-23 114.8 300 32.3
Rhsim01G0207500 Rhododendron simsii HOM05D007994 ORTHO05D010092 1.7e-21 107.5 68 66.2
PGR119G1356 Punica granatum HOM05D007994 ORTHO05D010092 2.9e-21 106.7 144 41.7
VMungo1127G0625 Vigna mungo HOM05D007994 ORTHO05D010092 1.4e-20 104.4 90 50.0
Peaxi162Scf00002g05422 Petunia axillaris HOM05D007994 ORTHO05D010092 1.2e-19 101.3 270 29.3
SalBow3G1236 Salvia bowleyana HOM05D007994 ORTHO05D010092 6.1e-19 99.0 256 29.7
Ciclev10029500m.g Citrus clementina HOM05D007994 ORTHO05D010092 7.9e-19 98.6 99 52.5
Actinidia35451 Actinidia chinensis HOM05D000078 ORTHO05D010092 3.0e-18 96.7 70 58.6
Oeu058281.1 Olea europaea HOM05D007994 ORTHO05D010092 1.7e-16 90.9 84 52.4
Sopen11g026660 Solanum pennellii HOM05D007994 ORTHO05D010092 2.2e-16 90.5 99 48.5
Rhsim12G0093900 Rhododendron simsii HOM05D007994 ORTHO05D010092 1.1e-15 88.2 61 62.3
ATR0820G083 Amborella trichopoda HOM05D007994 ORTHO05D010092 1.3e-13 81.3 51 54.9
BcaC01g02012 Brassica carinata HOM05D007994 ORTHO05D010092 1.3e-13 81.3 261 24.5
C03p69540 Brassica napus HOM05D007994 ORTHO05D010092 1.3e-13 81.3 261 24.5
BolC3t19209H Brassica oleracea HOM05D007994 ORTHO05D010092 1.3e-13 81.3 261 24.5
A06p21760 Brassica napus HOM05D007994 ORTHO05D010092 2.9e-13 80.1 261 24.1
BraA06t25263Z Brassica rapa HOM05D007994 ORTHO05D010092 2.9e-13 80.1 261 24.1
TPR.G15591 Trifolium pratense HOM05D007994 ORTHO05D010092 2.9e-13 80.1 67 53.7
AT3G44716 Arabidopsis thaliana HOM05D007994 ORTHO05D010092 3.2e-12 76.6 102 36.3
Carub.0005s1038 Capsella rubella HOM05D007994 ORTHO05D010092 3.2e-12 76.6 75 41.3
Carub.0015s0006 Capsella rubella HOM05D007994 ORTHO05D010092 3.2e-12 76.6 75 41.3
AL5G22890 Arabidopsis lyrata HOM05D007994 ORTHO05D010092 5.5e-12 75.9 76 42.1
BcaB01g01144 Brassica carinata HOM05D007994 ORTHO05D010092 1.6e-11 74.3 73 39.7
Medtr4g055130 Medicago truncatula HOM05D007994 ORTHO05D010092 6.1e-11 72.4 67 44.8
Peaxi162Scf00102g01048 Petunia axillaris HOM05D002950 ORTHO05D009601 7.9e-11 72.0 250 29.6
Psat0ss1196g0560 Pisum sativum HOM05D002950 ORTHO05D009601 2.3e-10 70.5 284 26.1
CARHR151480 Cardamine hirsuta HOM05D007994 ORTHO05D010092 3.0e-10 70.1 75 37.3
Glyma.17G038600 Glycine max HOM05D002950 ORTHO05D009601 3.9e-10 69.7 280 26.8
Sp5g16480 Schrenkiella parvula HOM05D007994 ORTHO05D010092 5.1e-10 69.3 67 41.8
ClCG05G006810 Citrullus lanatus HOM05D002950 ORTHO05D009601 6.7e-10 68.9 294 26.9
CSS0018037 Camellia sinensis var. sinensis HOM05D002950 ORTHO05D009601 8.8e-10 68.6 293 25.9
Nitab4.5_0004088g0080 Nicotiana tabacum HOM05D002950 ORTHO05D009601 1.1e-09 68.2 253 27.7
Nitab4.5_0008210g0020 Nicotiana tabacum HOM05D002950 ORTHO05D009601 1.1e-09 68.2 230 28.3
CAN.G756.8 Capsicum annuum HOM05D002950 ORTHO05D009601 1.5e-09 67.8 252 27.4
vmacro07994 Vaccinium macrocarpon HOM05D002950 ORTHO05D009601 1.5e-09 67.8 289 26.3
Cc03_g00300 Coffea canephora HOM05D002950 ORTHO05D009601 2.0e-09 67.4 295 26.1
SGA_v2.0_scaffold227G43205 Striga asiatica HOM05D002950 ORTHO05D009601 2.0e-09 67.4 269 27.1
Lj6P699T26 Lonicera japonica HOM05D002950 ORTHO05D009601 2.6e-09 67.0 293 25.9
Rhsim04G0246700 Rhododendron simsii HOM05D002950 ORTHO05D009601 2.6e-09 67.0 244 27.0
Sed0010906 Sechium edule HOM05D002950 ORTHO05D009601 3.3e-09 66.6 302 25.8
Solyc01g088500.3 Solanum lycopersicum HOM05D002950 ORTHO05D009601 4.4e-09 66.2 249 27.7
Sopen01g035360 Solanum pennellii HOM05D002950 ORTHO05D009601 4.4e-09 66.2 249 27.7
TPR.G12622 Trifolium pratense HOM05D002950 ORTHO05D009601 4.4e-09 66.2 280 25.7
Glyma.07G233600 Glycine max HOM05D002950 ORTHO05D009601 5.7e-09 65.9 290 25.9
Hma1.2p1_1160F.1_g262450 Hydrangea macrophylla HOM05D002950 ORTHO05D009601 5.7e-09 65.9 251 27.9
ATR0796G185 Amborella trichopoda HOM05D002950 ORTHO05D009601 9.7e-09 65.1 254 28.0
Lj4g0024176 Lotus japonicus HOM05D002950 ORTHO05D009601 9.7e-09 65.1 296 25.7
Oeu022694.1 Olea europaea HOM05D002950 ORTHO05D009601 2.2e-08 63.9 248 27.8
Ciclev10005553m.g Citrus clementina HOM05D002950 ORTHO05D009601 2.8e-08 63.5 295 24.7
Dinv29530 Davidia involucrata HOM05D002950 ORTHO05D009601 4.8e-08 62.8 258 26.7
Migut.N00014 Erythranthe guttata HOM05D002950 ORTHO05D009601 6.3e-08 62.4 244 26.6
Medtr4g123700 Medicago truncatula HOM05D002950 ORTHO05D009601 6.3e-08 62.4 230 26.1
Psat7g190280 Pisum sativum HOM05D007994 ORTHO05D010092 1.1e-07 61.6 59 44.1
Peaxi162Scf00209g00931 Petunia axillaris HOM05D003287 ORTHO05D003688 1.4e-07 61.2 257 23.0
Ciclev10033305m.g Citrus clementina HOM05D005706 ORTHO05D007474 1.8e-07 60.8 224 25.4
Lalb_Chr12g0200711 Lupinus albus HOM05D002950 ORTHO05D009601 1.8e-07 60.8 279 25.8
CsaV3_3G015460 Cucumis sativus L. HOM05D002950 ORTHO05D009601 2.4e-07 60.5 272 26.1
C05p49040 Brassica napus HOM05D002950 ORTHO05D009601 4.1e-07 59.7 306 27.5
FvH4_4g21130 Fragaria vesca HOM05D002950 ORTHO05D009601 4.1e-07 59.7 252 25.4
Atru.chr4.3124 Acer truncatum HOM05D002950 ORTHO05D009601 5.3e-07 59.3 229 27.9
TAR365G0202 Trochodendron aralioides HOM05D002950 ORTHO05D009601 5.3e-07 59.3 244 25.4
Phvul.003G119500 Phaseolus vulgaris HOM05D002950 ORTHO05D009601 6.9e-07 58.9 265 24.2
BolC5t33644H Brassica oleracea HOM05D002950 ORTHO05D009601 9.1e-07 58.5 303 26.7
FAN17G2745 Fragaria x ananassa HOM05D002950 ORTHO05D009601 9.1e-07 58.5 252 25.4
arahy.Tifrunner.gnm1.ann1.IY3TI3 Arachis hypogaea HOM05D002950 ORTHO05D009601 1.2e-06 58.2 277 24.9
arahy.Tifrunner.gnm1.ann1.S2XP9D Arachis hypogaea HOM05D002950 ORTHO05D009601 1.2e-06 58.2 294 25.2
Atru.chr11.1634 Acer truncatum HOM05D003287 ORTHO05D003688 2.0e-06 57.4 223 24.7
COL.COLO4_34541 Corchorus olitorius HOM05D000108 ORTHO05D001378 2.6e-06 57.0 258 25.6
FAN07G1569 Fragaria x ananassa HOM05D002950 ORTHO05D009601 2.6e-06 57.0 252 25.0
Medtr4g053310 Medicago truncatula HOM05D007994 ORTHO05D010092 3.4e-06 56.6 36 52.8
BraA05t22067Z Brassica rapa HOM05D002950 ORTHO05D009601 4.5e-06 56.2 303 26.1
PSO761G0183 Papaver somniferum HOM05D002950 ORTHO05D009601 4.5e-06 56.2 288 26.0
Potri.010G158500 Populus trichocarpa HOM05D003287 ORTHO05D003688 4.5e-06 56.2 222 25.2
A05p32400 Brassica napus HOM05D002950 ORTHO05D009601 5.9e-06 55.8 303 26.1
Glyma.05G039000 Glycine max HOM05D007075 ORTHO05D009063 5.9e-06 55.8 263 25.1
PSO210G4875 Papaver somniferum HOM05D002950 ORTHO05D009601 5.9e-06 55.8 281 26.0
RcHm_v2.0_Chr4g0426711 Rosa chinensis HOM05D002950 ORTHO05D009601 7.7e-06 55.5 267 23.6


User provided reference genes

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